[INFO] fetching crate openmm-sys 7.4.1...
[INFO] documenting openmm-sys-7.4.1 against 1.76.0 for beta-1.77-rustdoc-1
[INFO] extracting crate openmm-sys 7.4.1 into /workspace/builds/worker-5-tc1/source
[INFO] validating manifest of crates.io crate openmm-sys 7.4.1 on toolchain 1.76.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.76.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate openmm-sys 7.4.1
[INFO] finished tweaking crates.io crate openmm-sys 7.4.1
[INFO] tweaked toml for crates.io crate openmm-sys 7.4.1 written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] crate crates.io crate openmm-sys 7.4.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.76.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded cmake v0.1.44
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.76.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 83b8ea221bf82e068dda02e7cf9911e9522dfc597b70d8237dc57170b0f4faef
[INFO] running `Command { std: "docker" "start" "-a" "83b8ea221bf82e068dda02e7cf9911e9522dfc597b70d8237dc57170b0f4faef", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "83b8ea221bf82e068dda02e7cf9911e9522dfc597b70d8237dc57170b0f4faef", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "83b8ea221bf82e068dda02e7cf9911e9522dfc597b70d8237dc57170b0f4faef", kill_on_drop: false }`
[INFO] [stdout] 83b8ea221bf82e068dda02e7cf9911e9522dfc597b70d8237dc57170b0f4faef
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.76.0" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c5f316f6164bff3d6f2d9660ea4a3585028a5ada1b2a588662b53f2119250f3b
[INFO] running `Command { std: "docker" "start" "-a" "c5f316f6164bff3d6f2d9660ea4a3585028a5ada1b2a588662b53f2119250f3b", kill_on_drop: false }`
[INFO] [stderr]    Compiling cc v1.0.59
[INFO] [stderr]    Compiling cmake v0.1.44
[INFO] [stderr]    Compiling openmm-sys v7.4.1 (/opt/rustwide/workdir)
[INFO] [stderr] The following warnings were emitted during compilation:
[INFO] [stderr] 
[INFO] [stderr] warning: openmm-sys@7.4.1: [OpenMM-sys] Dynamically linking against the OpenMM library.
[INFO] [stderr] 
[INFO] [stderr] error: failed to run custom build command for `openmm-sys v7.4.1 (/opt/rustwide/workdir)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/openmm-sys-5b85594768b3f285/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   cargo:warning=[OpenMM-sys] Dynamically linking against the OpenMM library.
[INFO] [stderr]   running: cd "/opt/rustwide/target/debug/build/openmm-sys-124ad016d4f25179/out/build" && CMAKE_PREFIX_PATH="" "cmake" "/opt/rustwide/workdir/openmm" "-DOPENMM_BUILD_PYTHON_WRAPPERS=OFF" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/openmm-sys-124ad016d4f25179/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Release"
[INFO] [stderr]   -- Found PythonInterp: /usr/bin/python3.10 (found version "3.10.12") 
[INFO] [stderr]   -- The C compiler identification is GNU 11.4.0
[INFO] [stderr]   -- The CXX compiler identification is GNU 11.4.0
[INFO] [stderr]   -- Detecting C compiler ABI info
[INFO] [stderr]   -- Detecting C compiler ABI info - done
[INFO] [stderr]   -- Check for working C compiler: /usr/bin/cc - skipped
[INFO] [stderr]   -- Detecting C compile features
[INFO] [stderr]   -- Detecting C compile features - done
[INFO] [stderr]   -- Detecting CXX compiler ABI info
[INFO] [stderr]   -- Detecting CXX compiler ABI info - done
[INFO] [stderr]   -- Check for working CXX compiler: /usr/bin/c++ - skipped
[INFO] [stderr]   -- Detecting CXX compile features
[INFO] [stderr]   -- Detecting CXX compile features - done
[INFO] [stderr]   -- Configuring incomplete, errors occurred!
[INFO] [stderr]   See also "/opt/rustwide/target/debug/build/openmm-sys-124ad016d4f25179/out/build/CMakeFiles/CMakeOutput.log".
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr]   fatal: not a git repository (or any parent up to mount point /opt/rustwide)
[INFO] [stderr]   Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
[INFO] [stderr]   CMake Deprecation Warning at CMakeLists.txt:25 (CMAKE_POLICY):
[INFO] [stderr]     The OLD behavior for policy CMP0042 will be removed from a future version
[INFO] [stderr]     of CMake.
[INFO] [stderr] 
[INFO] [stderr]     The cmake-policies(7) manual explains that the OLD behaviors of all
[INFO] [stderr]     policies are deprecated and that a policy should be set to OLD only under
[INFO] [stderr]     specific short-term circumstances.  Projects should be ported to the NEW
[INFO] [stderr]     behavior and not rely on setting a policy to OLD.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Error at /usr/share/cmake-3.22/Modules/FindPackageHandleStandardArgs.cmake:230 (message):
[INFO] [stderr]     Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
[INFO] [stderr]   Call Stack (most recent call first):
[INFO] [stderr]     /usr/share/cmake-3.22/Modules/FindPackageHandleStandardArgs.cmake:594 (_FPHSA_FAILURE_MESSAGE)
[INFO] [stderr]     /usr/share/cmake-3.22/Modules/FindDoxygen.cmake:646 (find_package_handle_standard_args)
[INFO] [stderr]     wrappers/CMakeLists.txt:1 (find_package)
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/cmake-0.1.44/src/lib.rs:885:5:
[INFO] [stderr] 
[INFO] [stderr]   command did not execute successfully, got: exit status: 1
[INFO] [stderr] 
[INFO] [stderr]   build script failed, must exit now
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x5594ee91fe56 - std::backtrace_rs::backtrace::libunwind::trace::hbee8a7973eeb6c93
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/../../backtrace/src/backtrace/libunwind.rs:104:5
[INFO] [stderr]      1:     0x5594ee91fe56 - std::backtrace_rs::backtrace::trace_unsynchronized::hc8ac75eea3aa6899
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stderr]      2:     0x5594ee91fe56 - std::sys_common::backtrace::_print_fmt::hc7f3e3b5298b1083
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:68:5
[INFO] [stderr]      3:     0x5594ee91fe56 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::hbb235daedd7c6190
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:44:22
[INFO] [stderr]      4:     0x5594ee945900 - core::fmt::rt::Argument::fmt::h76c38a80d925a410
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/fmt/rt.rs:142:9
[INFO] [stderr]      5:     0x5594ee945900 - core::fmt::write::h3ed6aeaa977c8e45
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/fmt/mod.rs:1120:17
[INFO] [stderr]      6:     0x5594ee91d75f - std::io::Write::write_fmt::h78b18af5775fedb5
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/io/mod.rs:1810:15
[INFO] [stderr]      7:     0x5594ee91fc34 - std::sys_common::backtrace::_print::h5d645a07e0fcfdbb
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:47:5
[INFO] [stderr]      8:     0x5594ee91fc34 - std::sys_common::backtrace::print::h85035a511aafe7a8
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:34:9
[INFO] [stderr]      9:     0x5594ee9213a7 - std::panicking::default_hook::{{closure}}::hcce8cea212785a25
[INFO] [stderr]     10:     0x5594ee921109 - std::panicking::default_hook::hf5fcb0f213fe709a
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:292:9
[INFO] [stderr]     11:     0x5594ee921838 - std::panicking::rust_panic_with_hook::h095fccf1dc9379ee
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:779:13
[INFO] [stderr]     12:     0x5594ee921712 - std::panicking::begin_panic_handler::{{closure}}::h032ba12139b353db
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:657:13
[INFO] [stderr]     13:     0x5594ee920356 - std::sys_common::backtrace::__rust_end_short_backtrace::h9259bc2ff8fd0f76
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:171:18
[INFO] [stderr]     14:     0x5594ee921470 - rust_begin_unwind
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:645:5
[INFO] [stderr]     15:     0x5594ee8b2685 - core::panicking::panic_fmt::h784f20a50eaab275
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/panicking.rs:72:14
[INFO] [stderr]     16:     0x5594ee8c1501 - cmake::fail::h65e6b8a85f25684b
[INFO] [stderr]     17:     0x5594ee8c0c07 - cmake::run::hd9c1ce611c117353
[INFO] [stderr]     18:     0x5594ee8bd144 - cmake::Config::build::h5a178b0192633314
[INFO] [stderr]     19:     0x5594ee8b8771 - build_script_build::main::h18eee69cfed8cc17
[INFO] [stderr]     20:     0x5594ee8b3813 - core::ops::function::FnOnce::call_once::ha76916338d4c479a
[INFO] [stderr]     21:     0x5594ee8b2ea6 - std::sys_common::backtrace::__rust_begin_short_backtrace::h276022ead810a5ba
[INFO] [stderr]     22:     0x5594ee8b3129 - std::rt::lang_start::{{closure}}::h7095dd9d638af865
[INFO] [stderr]     23:     0x5594ee919471 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::h37600b1e5eea4ecd
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/ops/function.rs:284:13
[INFO] [stderr]     24:     0x5594ee919471 - std::panicking::try::do_call::hb4bda49fa13a0c2b
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:552:40
[INFO] [stderr]     25:     0x5594ee919471 - std::panicking::try::h8bbf75149211aaaa
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:516:19
[INFO] [stderr]     26:     0x5594ee919471 - std::panic::catch_unwind::h8c78ec68ebea34cb
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panic.rs:142:14
[INFO] [stderr]     27:     0x5594ee919471 - std::rt::lang_start_internal::{{closure}}::hffdf44a19fd9e220
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/rt.rs:148:48
[INFO] [stderr]     28:     0x5594ee919471 - std::panicking::try::do_call::hcb3194972c74716d
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:552:40
[INFO] [stderr]     29:     0x5594ee919471 - std::panicking::try::hcdc6892c5f0dba4c
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:516:19
[INFO] [stderr]     30:     0x5594ee919471 - std::panic::catch_unwind::h4910beb4573f4776
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panic.rs:142:14
[INFO] [stderr]     31:     0x5594ee919471 - std::rt::lang_start_internal::h6939038e2873596b
[INFO] [stderr]                                  at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/rt.rs:148:20
[INFO] [stderr]     32:     0x5594ee8b3107 - std::rt::lang_start::h7f8c6fa62b572950
[INFO] [stderr]     33:     0x5594ee8b8ca5 - main
[INFO] [stderr]     34:     0x7f5dc4666d90 - <unknown>
[INFO] [stderr]     35:     0x7f5dc4666e40 - __libc_start_main
[INFO] [stderr]     36:     0x5594ee8b2db5 - _start
[INFO] [stderr]     37:                0x0 - <unknown>
[INFO] running `Command { std: "docker" "inspect" "c5f316f6164bff3d6f2d9660ea4a3585028a5ada1b2a588662b53f2119250f3b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c5f316f6164bff3d6f2d9660ea4a3585028a5ada1b2a588662b53f2119250f3b", kill_on_drop: false }`
[INFO] [stdout] c5f316f6164bff3d6f2d9660ea4a3585028a5ada1b2a588662b53f2119250f3b
