[INFO] fetching crate tskit 0.14.1...
[INFO] testing tskit-0.14.1 against 1.76.0 for beta-1.77-1
[INFO] extracting crate tskit 0.14.1 into /workspace/builds/worker-3-tc1/source
[INFO] validating manifest of crates.io crate tskit 0.14.1 on toolchain 1.76.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.76.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate tskit 0.14.1
[INFO] removed 0 missing examples
[INFO] finished tweaking crates.io crate tskit 0.14.1
[INFO] tweaked toml for crates.io crate tskit 0.14.1 written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] crate crates.io crate tskit 0.14.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.76.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded pest v2.5.7
[INFO] [stderr]   Downloaded mbox v0.6.0
[INFO] [stderr]   Downloaded delegate v0.9.0
[INFO] [stderr]   Downloaded iter-read v0.3.1
[INFO] [stderr]   Downloaded tskit-derive v0.2.0
[INFO] [stderr]   Downloaded bindgen v0.63.0
[INFO] [stderr]   Downloaded serde-pickle v1.1.1
[INFO] [stderr]   Downloaded proptest v1.1.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.76.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] abbd29f86274e8aaaf3964821314fddc19a1786b7ab1c28252304c0f4a8003b5
[INFO] running `Command { std: "docker" "start" "-a" "abbd29f86274e8aaaf3964821314fddc19a1786b7ab1c28252304c0f4a8003b5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "abbd29f86274e8aaaf3964821314fddc19a1786b7ab1c28252304c0f4a8003b5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "abbd29f86274e8aaaf3964821314fddc19a1786b7ab1c28252304c0f4a8003b5", kill_on_drop: false }`
[INFO] [stdout] abbd29f86274e8aaaf3964821314fddc19a1786b7ab1c28252304c0f4a8003b5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.76.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b3c2d4d4ea1fe369fd788d01f9deec2d3d088a76741a767922ba3c6273241736
[INFO] running `Command { std: "docker" "start" "-a" "b3c2d4d4ea1fe369fd788d01f9deec2d3d088a76741a767922ba3c6273241736", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.56
[INFO] [stderr]    Compiling libc v0.2.141
[INFO] [stderr]    Compiling thiserror v1.0.40
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]    Compiling ucd-trie v0.1.5
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]    Compiling libloading v0.7.4
[INFO] [stderr]    Compiling regex-syntax v0.6.29
[INFO] [stderr]    Compiling bindgen v0.63.0
[INFO] [stderr]    Compiling either v1.8.1
[INFO] [stderr]    Compiling clang-sys v1.6.1
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling shlex v1.1.0
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling quote v1.0.26
[INFO] [stderr]    Compiling pkg-config v0.3.26
[INFO] [stderr]    Compiling stable_deref_trait v1.2.0
[INFO] [stderr]    Compiling streaming-iterator v0.1.9
[INFO] [stderr]    Compiling syn v2.0.13
[INFO] [stderr]    Compiling which v4.4.0
[INFO] [stderr]    Compiling jobserver v0.1.26
[INFO] [stderr]    Compiling cc v1.0.79
[INFO] [stderr]    Compiling regex v1.7.3
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.40
[INFO] [stderr]    Compiling pest v2.5.7
[INFO] [stderr]    Compiling semver-parser v0.10.2
[INFO] [stderr]    Compiling delegate v0.9.0
[INFO] [stderr]    Compiling semver v0.11.0
[INFO] [stderr]    Compiling rustc_version v0.3.3
[INFO] [stderr]    Compiling mbox v0.6.0
[INFO] [stderr]    Compiling tskit v0.14.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 16.61s
[INFO] running `Command { std: "docker" "inspect" "b3c2d4d4ea1fe369fd788d01f9deec2d3d088a76741a767922ba3c6273241736", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b3c2d4d4ea1fe369fd788d01f9deec2d3d088a76741a767922ba3c6273241736", kill_on_drop: false }`
[INFO] [stdout] b3c2d4d4ea1fe369fd788d01f9deec2d3d088a76741a767922ba3c6273241736
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.76.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] acbe5c99830d110c84c54341b44aa0e309de99de2585505db878dc4b4223a69f
[INFO] running `Command { std: "docker" "start" "-a" "acbe5c99830d110c84c54341b44aa0e309de99de2585505db878dc4b4223a69f", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.141
[INFO] [stderr]    Compiling libm v0.2.6
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling serde_derive v1.0.159
[INFO] [stderr]    Compiling io-lifetimes v1.0.9
[INFO] [stderr]    Compiling libloading v0.7.4
[INFO] [stderr]    Compiling serde v1.0.159
[INFO] [stderr]    Compiling rustix v0.37.7
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling linux-raw-sys v0.3.1
[INFO] [stderr]    Compiling ppv-lite86 v0.2.17
[INFO] [stderr]    Compiling which v4.4.0
[INFO] [stderr]    Compiling jobserver v0.1.26
[INFO] [stderr]    Compiling clang-sys v1.6.1
[INFO] [stderr]    Compiling cc v1.0.79
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling num-bigint v0.4.3
[INFO] [stderr]    Compiling indexmap v1.9.3
[INFO] [stderr]    Compiling getrandom v0.2.8
[INFO] [stderr]    Compiling fastrand v1.9.0
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling wait-timeout v0.2.0
[INFO] [stderr]    Compiling serde_json v1.0.95
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling bit-vec v0.6.3
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling anyhow v1.0.70
[INFO] [stderr]    Compiling mbox v0.6.0
[INFO] [stderr]    Compiling clap_derive v3.2.18
[INFO] [stderr]    Compiling bit-set v0.5.3
[INFO] [stderr]    Compiling bindgen v0.63.0
[INFO] [stderr]    Compiling rand_xorshift v0.3.0
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling quick-error v2.0.1
[INFO] [stderr]    Compiling iter-read v0.3.1
[INFO] [stderr]    Compiling unarray v0.1.4
[INFO] [stderr]    Compiling termcolor v1.2.0
[INFO] [stderr]    Compiling once_cell v1.17.1
[INFO] [stderr]    Compiling tempfile v3.5.0
[INFO] [stderr]    Compiling rusty-fork v0.3.0
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling proptest v1.1.0
[INFO] [stderr]    Compiling humantime v2.1.0
[INFO] [stderr]    Compiling clap v3.2.23
[INFO] [stderr]    Compiling tskit v0.14.1 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling serde-pickle v1.1.1
[INFO] [stderr]    Compiling bincode v1.3.3
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 21.72s
[INFO] running `Command { std: "docker" "inspect" "acbe5c99830d110c84c54341b44aa0e309de99de2585505db878dc4b4223a69f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "acbe5c99830d110c84c54341b44aa0e309de99de2585505db878dc4b4223a69f", kill_on_drop: false }`
[INFO] [stdout] acbe5c99830d110c84c54341b44aa0e309de99de2585505db878dc4b4223a69f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.76.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 4b2981e35af19ac1b2262b88293b8b738b5c7717d8ae4f381531b7ca2746e5ab
[INFO] running `Command { std: "docker" "start" "-a" "4b2981e35af19ac1b2262b88293b8b738b5c7717d8ae4f381531b7ca2746e5ab", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.15s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/tskit-8a81c8e06ba85afd)
[INFO] [stdout] running 88 tests
[INFO] [stdout] test _macros::test::test_handle_good_return_value ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_avl_node_int_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_edge_list_node_t ... ok
[INFO] [stdout] test _macros::test::test_handle_return_value_test_panic ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_ls_hmm_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_kaitem_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_identity_segment_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_kastore_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_table_sorter_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__IO_FILE ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_avl_tree_int_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_argsort_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_blkalloc_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_diff_iter_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_edge_list_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_edge_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_compressed_matrix_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_identity_segment_list_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_edge_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_identity_segments_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_ld_calc_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_individual_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_node_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_mutation_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_node_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_population_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_mutation_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_population_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_provenance_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_migration_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_migration_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_individual_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_recomb_required_record ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_reference_sequence_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_site_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_site_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_site_probability_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_provenance_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_bookmark_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_state_transition_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_table_collection_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_table_collection_t__bindgen_ty_1 ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_tree_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_vargen_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_variant_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_value_transition_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_transition_stack_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_treeseq_t ... ok
[INFO] [stdout] test error::test::test_extract_error_message ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_tree_t__bindgen_ty_1 ... ok
[INFO] [stdout] test error::test::test_error_formatting ... ok
[INFO] [stdout] test metadata::test_serde::test_metadata_round_trip ... ok
[INFO] [stdout] test metadata::test_serde::test_metadata_round_trip_wrong_type ... ok
[INFO] [stdout] test _macros::test::test_tskit_panic - should panic ... ok
[INFO] [stdout] test error::test::test_get_tskit_error_message ... ok
[INFO] [stdout] test metadata::tests::test_encoded_metadata_roundtrip ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_viterbi_matrix_t ... ok
[INFO] [stdout] test flags::tests::node_is_sample ... ok
[INFO] [stdout] test metadata::test_serde::test_encoded_metadata_roundtrip ... ok
[INFO] [stdout] test metadata::tests::test_metadata_round_trip ... ok
[INFO] [stdout] test metadata::tests::test_vec8_cast_to_c_string ... ok
[INFO] [stdout] test flags::tests::node_is_not_sample ... ok
[INFO] [stdout] test newtypes::test_f64_newtype_Display ... ok
[INFO] [stdout] test newtypes::test_usize_to_size_type ... ok
[INFO] [stdout] test node_table::test_owned_node_table::test_add_row ... ok
[INFO] [stdout] test sys::test_error_code ... ok
[INFO] [stdout] test sys::test_error_message ... ok
[INFO] [stdout] test table_views::table_views_tests::test_treeseq ... ok
[INFO] [stdout] test test_simplification::tests::test_simplify_tables ... ok
[INFO] [stdout] test test_simplification::tests::test_simplify_treeseq ... ok
[INFO] [stdout] test test_tsk_variables::tests::test_node_is_sample ... ok
[INFO] [stdout] test tests::test_c_api_version ... ok
[INFO] [stdout] test trees::test_trees::test_array_lifetime ... ok
[INFO] [stdout] test trees::test_trees::test_create_treeseq_from_tables ... ok
[INFO] [stdout] test trees::test_trees::test_create_treeseq_new_from_tables ... ok
[INFO] [stdout] test trees::test_trees::test_dump_tables ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_no_roots ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_samples ... ok
[INFO] [stdout] test trees::test_treeeseq_send_sync::build_arc ... ok
[INFO] [stdout] test error::test::test_anyhow_compatability ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_samples_two_trees ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_tree_seq_with_one_tree ... ok
[INFO] [stdout] test trees::test_trees::test_kc_distance_naive_test ... ok
[INFO] [stdout] test trees::test_trees::test_num_tracked_samples ... ok
[INFO] [stdout] test trees::test_trees::test_num_tracked_samples_not_tracking_sample_counts - should panic ... ok
[INFO] [stdout] test trees::test_trees::test_reverse_tree_iteration ... ok
[INFO] [stdout] test trees::test_trees::test_samples_iterator_error_when_not_tracking_samples ... ok
[INFO] [stdout] test types::test::test_bookmark_mutability ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 88 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.09s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/book_metadata.rs (/opt/rustwide/target/debug/deps/book_metadata-da920a450d5f9387)
[INFO] [stderr]      Running tests/book_table_collection.rs (/opt/rustwide/target/debug/deps/book_table_collection-88927afa9c22ce36)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test test_adding_node_table_row_with_defaults_and_metadata_requiring_clone ... ok
[INFO] [stdout] test test_adding_node_table_row_with_defaults_and_metadata ... ok
[INFO] [stdout] test simple_table_collection_creation_with_newtype ... ok
[INFO] [stdout] test add_node_handle_error ... ok
[INFO] [stdout] test test_adding_node_table_row_with_defaults ... ok
[INFO] [stdout] test simple_table_collection_creation ... ok
[INFO] [stdout] test add_node_without_metadata ... ok
[INFO] [stderr]      Running tests/book_trees.rs (/opt/rustwide/target/debug/deps/book_trees-b1b88c3ae626731f)
[INFO] [stdout] test get_data_from_edge_table ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test initialize_from_table_collection ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/example_flags.rs (/opt/rustwide/target/debug/deps/example_flags-7a2a1e4b8f4a5f4d)
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test test_clip_invalid_flags ... ok
[INFO] [stdout] test test_example_node_flags ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test test_node_id_as_usize ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/experimental.rs (/opt/rustwide/target/debug/deps/experimental-1863c4311606728c)
[INFO] [stderr]      Running tests/test_id_types.rs (/opt/rustwide/target/debug/deps/test_id_types-18d21051f90e9e9a)
[INFO] [stderr]      Running tests/test_metadata.rs (/opt/rustwide/target/debug/deps/test_metadata-054dde895407c3cb)
[INFO] [stderr]      Running tests/test_tables.rs (/opt/rustwide/target/debug/deps/test_tables-9263c9cfe8738165)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_edge ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_migration ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_population ... ok
[INFO] [stdout] test test_empty_table_collection ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_mutation ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_node ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_individual ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_site ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.03s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests tskit
[INFO] [stdout] 
[INFO] [stdout] running 148 tests
[INFO] [stdout] test src/edge_table.rs - edge_table::OwningEdgeTable (line 327) ... ok
[INFO] [stdout] test src/bindings.rs - bindings (line 12) ... ok
[INFO] [stdout] test src/error.rs - error::get_tskit_error_message (line 93) ... ok
[INFO] [stdout] test src/error.rs - error::panic_on_tskit_error (line 65) ... ok
[INFO] [stdout] test src/error.rs - error::panic_on_tskit_error (line 56) ... ok
[INFO] [stdout] test src/error.rs - error::get_tskit_error_message (line 77) ... ok
[INFO] [stdout] test src/flags.rs - flags::IndividualTableSortOptions (line 327) ... ok
[INFO] [stdout] test src/edge_table.rs - edge_table::OwningEdgeTable (line 312) ... ok
[INFO] [stdout] test src/error.rs - error::get_tskit_error_message (line 86) ... ok
[INFO] [stdout] test src/flags.rs - flags::NodeFlags (line 577) ... ok
[INFO] [stdout] test src/flags.rs - flags::NodeFlags (line 567) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::filter_individuals (line 146) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions (line 30) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::keep_input_roots (line 80) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions (line 37) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::filter_sites (line 124) ... ok
[INFO] [stdout] test src/flags.rs - flags::NodeFlags (line 586) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::filter_populations (line 113) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::keep_unary (line 91) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::reduce_to_site_topology (line 135) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 189) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::keep_unary_in_individuals (line 102) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 167) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 177) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 160) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 172) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 220) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 227) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 232) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 461) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 237) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 252) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 242) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 475) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 470) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 480) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 500) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 490) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 485) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 505) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableSortOptions (line 291) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeFlags (line 347) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 495) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableSortOptions (line 300) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableOutputOptions (line 395) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeSequenceFlags (line 432) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 221) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeFlags (line 356) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeFlags (line 361) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 233) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 256) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 314) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 283) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 302) ... ok
[INFO] [stdout] test src/lib.rs - (line 35) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::OwningIndividualTable (line 442) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeSequenceFlags (line 423) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::OwningIndividualTable (line 455) ... ok
[INFO] [stdout] test src/metadata.rs - metadata (line 76) ... ok
[INFO] [stdout] test src/metadata.rs - metadata (line 30) ... ok
[INFO] [stdout] test src/migration_table.rs - migration_table::OwningMigrationTable (line 374) ... ok
[INFO] [stdout] test src/mutation_table.rs - mutation_table::OwningMutationTable (line 362) ... ok
[INFO] [stdout] test src/migration_table.rs - migration_table::OwningMigrationTable (line 386) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::NodeId (line 16) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::NodeId (line 56) ... ok
[INFO] [stdout] test src/mutation_table.rs - mutation_table::OwningMutationTable (line 350) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::NodeId (line 40) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaultsWithMetadataNotCloneNotDebug (line 412) - compile fail ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaultsWithMetadataNotCloneNotDebug (line 376) - compile fail ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaults (line 245) ... ok
[INFO] [stdout] test src/metadata.rs - metadata (line 103) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::Time (line 288) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::SizeType (line 147) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags (line 543) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaults (line 255) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 835) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::time_slice_mut (line 745) - compile fail ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 786) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 822) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 811) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 797) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::individual (line 620) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::population (line 577) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::time (line 518) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::OwningNodeTable (line 892) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::OwningNodeTable (line 880) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::time_slice_mut (line 755) ... ok
[INFO] [stdout] test src/population_table.rs - population_table::OwningPopulationTable (line 225) ... ok
[INFO] [stdout] test src/population_table.rs - population_table::OwningPopulationTable (line 213) ... ok
[INFO] [stdout] test src/site_table.rs - site_table::OwningSiteTable (line 265) ... ok
[INFO] [stdout] test src/site_table.rs - site_table::OwningSiteTable (line 277) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection (line 33) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge_with_metadata (line 272) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::OwningNodeTable::add_row_with_defaults (line 974) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge (line 237) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual (line 293) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge (line 223) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge (line 251) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual_with_metadata (line 334) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual (line 314) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual (line 303) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_migration_with_metadata (line 378) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_migration (line 360) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_node_with_metadata (line 451) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_mutation_with_metadata (line 529) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::check_integrity (line 889) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_population (line 549) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_population_with_metadata (line 564) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_node_with_defaults (line 425) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_site_with_metadata (line 500) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::check_integrity (line 882) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::check_integrity (line 896) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::create_node_id_vector (line 1294) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::new (line 92) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::sequence_length (line 211) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::new (line 86) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_edges (line 970) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_migrations (line 1161) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::new_from_file (line 165) ... FAILED
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_individuals (line 1119) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_nodes (line 1007) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_mutations (line 1080) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_populations (line 1200) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_child_array (line 269) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_sample_array (line 169) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_sib_array (line 229) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::next_sample_array (line 132) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_child_array (line 289) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::parent_array (line 59) - compile fail ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_sites (line 1044) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_sib_array (line 249) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_sample_array (line 206) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::samples_array (line 93) - compile fail ... ok
[INFO] [stdout] test src/table_views.rs - table_views::TableViews::create_node_id_vector (line 206) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::topological_sort_individuals (line 685) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence (line 178) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_sample_array (line 155) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::next_sample_array (line 118) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_sample_array (line 192) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::tree_iterator (line 348) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::samples_array (line 79) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence (line 159) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::create_node_id_vector (line 551) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::tree_iterator (line 364) - compile ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::new (line 218) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::new (line 227) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::new (line 235) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::tree_iterator (line 328) ... ok
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- src/table_collection.rs - table_collection::TableCollection::new_from_file (line 165) stdout ----
[INFO] [stdout] Test executable failed (exit status: 101).
[INFO] [stdout] 
[INFO] [stdout] stderr:
[INFO] [stdout] thread 'main' panicked at src/table_collection.rs:6:71:
[INFO] [stdout] called `Result::unwrap()` on an `Err` value: ErrorCode { code: -3 }
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x558a5e6f6ef6 - std::backtrace_rs::backtrace::libunwind::trace::hbee8a7973eeb6c93
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/../../backtrace/src/backtrace/libunwind.rs:104:5
[INFO] [stdout]    1:     0x558a5e6f6ef6 - std::backtrace_rs::backtrace::trace_unsynchronized::hc8ac75eea3aa6899
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stdout]    2:     0x558a5e6f6ef6 - std::sys_common::backtrace::_print_fmt::hc7f3e3b5298b1083
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:68:5
[INFO] [stdout]    3:     0x558a5e6f6ef6 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::hbb235daedd7c6190
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:44:22
[INFO] [stdout]    4:     0x558a5e7196c0 - core::fmt::rt::Argument::fmt::h76c38a80d925a410
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/fmt/rt.rs:142:9
[INFO] [stdout]    5:     0x558a5e7196c0 - core::fmt::write::h3ed6aeaa977c8e45
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/fmt/mod.rs:1120:17
[INFO] [stdout]    6:     0x558a5e6f53af - std::io::Write::write_fmt::h78b18af5775fedb5
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/io/mod.rs:1810:15
[INFO] [stdout]    7:     0x558a5e6f6cd4 - std::sys_common::backtrace::_print::h5d645a07e0fcfdbb
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:47:5
[INFO] [stdout]    8:     0x558a5e6f6cd4 - std::sys_common::backtrace::print::h85035a511aafe7a8
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:34:9
[INFO] [stdout]    9:     0x558a5e6f8237 - std::panicking::default_hook::{{closure}}::hcce8cea212785a25
[INFO] [stdout]   10:     0x558a5e6f7f99 - std::panicking::default_hook::hf5fcb0f213fe709a
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:292:9
[INFO] [stdout]   11:     0x558a5e6f86c8 - std::panicking::rust_panic_with_hook::h095fccf1dc9379ee
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:779:13
[INFO] [stdout]   12:     0x558a5e6f85a2 - std::panicking::begin_panic_handler::{{closure}}::h032ba12139b353db
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:657:13
[INFO] [stdout]   13:     0x558a5e6f73f6 - std::sys_common::backtrace::__rust_end_short_backtrace::h9259bc2ff8fd0f76
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:171:18
[INFO] [stdout]   14:     0x558a5e6f8300 - rust_begin_unwind
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:645:5
[INFO] [stdout]   15:     0x558a5e6c4fe5 - core::panicking::panic_fmt::h784f20a50eaab275
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/panicking.rs:72:14
[INFO] [stdout]   16:     0x558a5e6c5583 - core::result::unwrap_failed::h03d8a5018196e1cd
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/result.rs:1649:5
[INFO] [stdout]   17:     0x558a5e6c692b - core::result::Result<T,E>::unwrap::h150f7472392821b6
[INFO] [stdout]   18:     0x558a5e6c995c - rust_out::main::_doctest_main_src_table_collection_rs_165_0::hdb36be9b32c65d65
[INFO] [stdout]   19:     0x558a5e6c98a6 - rust_out::main::h7d13ed1f0b74fb4f
[INFO] [stdout]   20:     0x558a5e6c62d3 - core::ops::function::FnOnce::call_once::h9310bc2590e31970
[INFO] [stdout]   21:     0x558a5e6c5ab6 - std::sys_common::backtrace::__rust_begin_short_backtrace::haeb71db878654b8a
[INFO] [stdout]   22:     0x558a5e6c5f79 - std::rt::lang_start::{{closure}}::h3fc7e49d09688110
[INFO] [stdout]   23:     0x558a5e6f2f11 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::h37600b1e5eea4ecd
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/ops/function.rs:284:13
[INFO] [stdout]   24:     0x558a5e6f2f11 - std::panicking::try::do_call::hb4bda49fa13a0c2b
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:552:40
[INFO] [stdout]   25:     0x558a5e6f2f11 - std::panicking::try::h8bbf75149211aaaa
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:516:19
[INFO] [stdout]   26:     0x558a5e6f2f11 - std::panic::catch_unwind::h8c78ec68ebea34cb
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panic.rs:142:14
[INFO] [stdout]   27:     0x558a5e6f2f11 - std::rt::lang_start_internal::{{closure}}::hffdf44a19fd9e220
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/rt.rs:148:48
[INFO] [stdout]   28:     0x558a5e6f2f11 - std::panicking::try::do_call::hcb3194972c74716d
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:552:40
[INFO] [stdout]   29:     0x558a5e6f2f11 - std::panicking::try::hcdc6892c5f0dba4c
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:516:19
[INFO] [stdout]   30:     0x558a5e6f2f11 - std::panic::catch_unwind::h4910beb4573f4776
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panic.rs:142:14
[INFO] [stdout]   31:     0x558a5e6f2f11 - std::rt::lang_start_internal::h6939038e2873596b
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/rt.rs:148:20
[INFO] [stdout]   32:     0x558a5e6c5f57 - std::rt::lang_start::hd109d716ba1a5b01
[INFO] [stdout]   33:     0x558a5e6c9d35 - main
[INFO] [stdout]   34:     0x7fcd96008d90 - <unknown>
[INFO] [stdout]   35:     0x7fcd96008e40 - __libc_start_main
[INFO] [stdout]   36:     0x558a5e6c5845 - _start
[INFO] [stdout]   37:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     src/table_collection.rs - table_collection::TableCollection::new_from_file (line 165)
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 147 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 12.77s
[INFO] [stdout] 
[INFO] [stderr] error: doctest failed, to rerun pass `--doc`
[INFO] running `Command { std: "docker" "inspect" "4b2981e35af19ac1b2262b88293b8b738b5c7717d8ae4f381531b7ca2746e5ab", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4b2981e35af19ac1b2262b88293b8b738b5c7717d8ae4f381531b7ca2746e5ab", kill_on_drop: false }`
[INFO] [stdout] 4b2981e35af19ac1b2262b88293b8b738b5c7717d8ae4f381531b7ca2746e5ab
[INFO] testing tskit-0.14.1 against beta-2024-02-10 for beta-1.77-1
[INFO] extracting crate tskit 0.14.1 into /workspace/builds/worker-3-tc2/source
[INFO] validating manifest of crates.io crate tskit 0.14.1 on toolchain beta-2024-02-10
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2024-02-10" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate tskit 0.14.1
[INFO] removed 0 missing examples
[INFO] finished tweaking crates.io crate tskit 0.14.1
[INFO] tweaked toml for crates.io crate tskit 0.14.1 written to /workspace/builds/worker-3-tc2/source/Cargo.toml
[INFO] crate crates.io crate tskit 0.14.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2024-02-10" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-02-10" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] f92375c06c5dd5305824f7b62572f93eeace33164fe5e20896731a6f3ea782e1
[INFO] running `Command { std: "docker" "start" "-a" "f92375c06c5dd5305824f7b62572f93eeace33164fe5e20896731a6f3ea782e1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f92375c06c5dd5305824f7b62572f93eeace33164fe5e20896731a6f3ea782e1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f92375c06c5dd5305824f7b62572f93eeace33164fe5e20896731a6f3ea782e1", kill_on_drop: false }`
[INFO] [stdout] f92375c06c5dd5305824f7b62572f93eeace33164fe5e20896731a6f3ea782e1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-02-10" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 5b1bae7cbeb488e5c781d37c022d42bfdec86e854189d2182b9c35f128e8db81
[INFO] running `Command { std: "docker" "start" "-a" "5b1bae7cbeb488e5c781d37c022d42bfdec86e854189d2182b9c35f128e8db81", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.56
[INFO] [stderr]    Compiling libc v0.2.141
[INFO] [stderr]    Compiling thiserror v1.0.40
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]    Compiling ucd-trie v0.1.5
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]    Compiling libloading v0.7.4
[INFO] [stderr]    Compiling bindgen v0.63.0
[INFO] [stderr]    Compiling either v1.8.1
[INFO] [stderr]    Compiling regex-syntax v0.6.29
[INFO] [stderr]    Compiling clang-sys v1.6.1
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling shlex v1.1.0
[INFO] [stderr]    Compiling pkg-config v0.3.26
[INFO] [stderr]    Compiling stable_deref_trait v1.2.0
[INFO] [stderr]    Compiling quote v1.0.26
[INFO] [stderr]    Compiling streaming-iterator v0.1.9
[INFO] [stderr]    Compiling jobserver v0.1.26
[INFO] [stderr]    Compiling syn v2.0.13
[INFO] [stderr]    Compiling which v4.4.0
[INFO] [stderr]    Compiling cc v1.0.79
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling regex v1.7.3
[INFO] [stderr]    Compiling thiserror-impl v1.0.40
[INFO] [stderr]    Compiling pest v2.5.7
[INFO] [stderr]    Compiling delegate v0.9.0
[INFO] [stderr]    Compiling semver-parser v0.10.2
[INFO] [stderr]    Compiling semver v0.11.0
[INFO] [stderr]    Compiling rustc_version v0.3.3
[INFO] [stderr]    Compiling mbox v0.6.0
[INFO] [stderr]    Compiling tskit v0.14.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 22.04s
[INFO] running `Command { std: "docker" "inspect" "5b1bae7cbeb488e5c781d37c022d42bfdec86e854189d2182b9c35f128e8db81", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5b1bae7cbeb488e5c781d37c022d42bfdec86e854189d2182b9c35f128e8db81", kill_on_drop: false }`
[INFO] [stdout] 5b1bae7cbeb488e5c781d37c022d42bfdec86e854189d2182b9c35f128e8db81
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-02-10" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] fadbb52626f687dc2b91b4ca7bf9fe3e23c1fe5927b85a70866784c837fdf79b
[INFO] running `Command { std: "docker" "start" "-a" "fadbb52626f687dc2b91b4ca7bf9fe3e23c1fe5927b85a70866784c837fdf79b", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.141
[INFO] [stderr]    Compiling libm v0.2.6
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling io-lifetimes v1.0.9
[INFO] [stderr]    Compiling serde_derive v1.0.159
[INFO] [stderr]    Compiling libloading v0.7.4
[INFO] [stderr]    Compiling rustix v0.37.7
[INFO] [stderr]    Compiling serde v1.0.159
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling ppv-lite86 v0.2.17
[INFO] [stderr]    Compiling linux-raw-sys v0.3.1
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling num-bigint v0.4.3
[INFO] [stderr]    Compiling clang-sys v1.6.1
[INFO] [stderr]    Compiling jobserver v0.1.26
[INFO] [stderr]    Compiling which v4.4.0
[INFO] [stderr]    Compiling cc v1.0.79
[INFO] [stderr]    Compiling indexmap v1.9.3
[INFO] [stderr]    Compiling fastrand v1.9.0
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling anyhow v1.0.70
[INFO] [stderr]    Compiling getrandom v0.2.8
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling wait-timeout v0.2.0
[INFO] [stderr]    Compiling bit-vec v0.6.3
[INFO] [stderr]    Compiling serde_json v1.0.95
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling bit-set v0.5.3
[INFO] [stderr]    Compiling rand_xorshift v0.3.0
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling mbox v0.6.0
[INFO] [stderr]    Compiling bindgen v0.63.0
[INFO] [stderr]    Compiling clap_derive v3.2.18
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling once_cell v1.17.1
[INFO] [stderr]    Compiling iter-read v0.3.1
[INFO] [stderr]    Compiling quick-error v2.0.1
[INFO] [stderr]    Compiling tempfile v3.5.0
[INFO] [stderr]    Compiling unarray v0.1.4
[INFO] [stderr]    Compiling termcolor v1.2.0
[INFO] [stderr]    Compiling rusty-fork v0.3.0
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling proptest v1.1.0
[INFO] [stderr]    Compiling humantime v2.1.0
[INFO] [stderr]    Compiling clap v3.2.23
[INFO] [stderr]    Compiling tskit v0.14.1 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling serde-pickle v1.1.1
[INFO] [stderr]    Compiling bincode v1.3.3
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 37.02s
[INFO] running `Command { std: "docker" "inspect" "fadbb52626f687dc2b91b4ca7bf9fe3e23c1fe5927b85a70866784c837fdf79b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fadbb52626f687dc2b91b4ca7bf9fe3e23c1fe5927b85a70866784c837fdf79b", kill_on_drop: false }`
[INFO] [stdout] fadbb52626f687dc2b91b4ca7bf9fe3e23c1fe5927b85a70866784c837fdf79b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-02-10" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] b7abce169db44482c9aa70820c98a4770819a176a3faac5af07387aefd1a9d05
[INFO] running `Command { std: "docker" "start" "-a" "b7abce169db44482c9aa70820c98a4770819a176a3faac5af07387aefd1a9d05", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.13s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/tskit-9d946256cc149eb2)
[INFO] [stdout] 
[INFO] [stdout] running 88 tests
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_avl_node_int_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_identity_segment_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_ls_hmm_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_kastore_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__IO_FILE ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_table_sorter_t ... ok
[INFO] [stdout] test _macros::test::test_handle_good_return_value ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_kaitem_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_edge_list_node_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_blkalloc_t ... ok
[INFO] [stdout] test _macros::test::test_handle_return_value_test_panic ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_avl_tree_int_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_bookmark_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_argsort_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_compressed_matrix_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_diff_iter_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_edge_list_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_individual_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_identity_segments_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_individual_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_identity_segment_list_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_ld_calc_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_mutation_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_node_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_migration_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_population_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_migration_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_node_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_provenance_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_provenance_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_recomb_required_record ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_reference_sequence_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_site_probability_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_site_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_site_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_state_transition_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_edge_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_table_collection_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_mutation_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_population_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_treeseq_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_edge_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_transition_stack_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_tree_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_value_transition_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_tree_t__bindgen_ty_1 ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_table_collection_t__bindgen_ty_1 ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_vargen_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_variant_t ... ok
[INFO] [stdout] test error::test::test_anyhow_compatability ... ok
[INFO] [stdout] test error::test::test_get_tskit_error_message ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_viterbi_matrix_t ... ok
[INFO] [stdout] test error::test::test_error_formatting ... ok
[INFO] [stdout] test flags::tests::node_is_sample ... ok
[INFO] [stdout] test metadata::test_serde::test_metadata_round_trip_wrong_type ... ok
[INFO] [stdout] test flags::tests::node_is_not_sample ... ok
[INFO] [stdout] test newtypes::test_f64_newtype_Display ... ok
[INFO] [stdout] test metadata::test_serde::test_encoded_metadata_roundtrip ... ok
[INFO] [stdout] test metadata::test_serde::test_metadata_round_trip ... ok
[INFO] [stdout] test metadata::tests::test_metadata_round_trip ... ok
[INFO] [stdout] test newtypes::test_usize_to_size_type ... ok
[INFO] [stdout] test metadata::tests::test_vec8_cast_to_c_string ... ok
[INFO] [stdout] test sys::test_error_code ... ok
[INFO] [stdout] test sys::test_error_message ... ok
[INFO] [stdout] test error::test::test_extract_error_message ... ok
[INFO] [stdout] test metadata::tests::test_encoded_metadata_roundtrip ... ok
[INFO] [stdout] test test_simplification::tests::test_simplify_tables ... ok
[INFO] [stdout] test test_tsk_variables::tests::test_node_is_sample ... ok
[INFO] [stdout] test node_table::test_owned_node_table::test_add_row ... ok
[INFO] [stdout] test table_views::table_views_tests::test_treeseq ... ok
[INFO] [stdout] test test_simplification::tests::test_simplify_treeseq ... ok
[INFO] [stdout] test tests::test_c_api_version ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_no_roots ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_samples ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_samples_two_trees ... ok
[INFO] [stdout] test trees::test_trees::test_create_treeseq_from_tables ... ok
[INFO] [stdout] test trees::test_treeeseq_send_sync::build_arc ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_tree_seq_with_one_tree ... ok
[INFO] [stdout] test trees::test_trees::test_create_treeseq_new_from_tables ... ok
[INFO] [stdout] test trees::test_trees::test_array_lifetime ... ok
[INFO] [stdout] test trees::test_trees::test_dump_tables ... ok
[INFO] [stdout] test _macros::test::test_tskit_panic - should panic ... ok
[INFO] [stdout] test trees::test_trees::test_num_tracked_samples ... ok
[INFO] [stdout] test trees::test_trees::test_kc_distance_naive_test ... ok
[INFO] [stdout] test trees::test_trees::test_reverse_tree_iteration ... ok
[INFO] [stdout] test trees::test_trees::test_num_tracked_samples_not_tracking_sample_counts - should panic ... ok
[INFO] [stdout] test types::test::test_bookmark_mutability ... ok
[INFO] [stdout] test trees::test_trees::test_samples_iterator_error_when_not_tracking_samples ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 88 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.15s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/book_metadata.rs (/opt/rustwide/target/debug/deps/book_metadata-13e3193026ce8772)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/book_table_collection.rs (/opt/rustwide/target/debug/deps/book_table_collection-48dd732d29be5cc4)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test add_node_without_metadata ... ok
[INFO] [stdout] test simple_table_collection_creation_with_newtype ... ok
[INFO] [stdout] test test_adding_node_table_row_with_defaults_and_metadata_requiring_clone ... ok
[INFO] [stdout] test test_adding_node_table_row_with_defaults ... ok
[INFO] [stdout] test simple_table_collection_creation ... ok
[INFO] [stdout] test test_adding_node_table_row_with_defaults_and_metadata ... ok
[INFO] [stdout] test get_data_from_edge_table ... ok
[INFO] [stderr]      Running tests/book_trees.rs (/opt/rustwide/target/debug/deps/book_trees-68ff26e5c9e5b349)
[INFO] [stdout] test add_node_handle_error ... ok
[INFO] [stderr]      Running tests/example_flags.rs (/opt/rustwide/target/debug/deps/example_flags-8c4da09c7e47543e)
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test initialize_from_table_collection ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test test_clip_invalid_flags ... ok
[INFO] [stderr]      Running tests/experimental.rs (/opt/rustwide/target/debug/deps/experimental-b60ba34893e78ebd)
[INFO] [stdout] test test_example_node_flags ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/test_id_types.rs (/opt/rustwide/target/debug/deps/test_id_types-a47289513bb0ddcb)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test test_node_id_as_usize ... ok
[INFO] [stderr]      Running tests/test_metadata.rs (/opt/rustwide/target/debug/deps/test_metadata-a8fb545a654ae1c0)
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/test_tables.rs (/opt/rustwide/target/debug/deps/test_tables-bdc73f34b0467e8b)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_migration ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_mutation ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_node ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_individual ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_population ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_site ... ok
[INFO] [stdout] test test_empty_table_collection ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_edge ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests tskit
[INFO] [stdout] 
[INFO] [stdout] running 148 tests
[INFO] [stdout] test src/edge_table.rs - edge_table::OwningEdgeTable (line 327) ... ok
[INFO] [stdout] test src/bindings.rs - bindings (line 12) ... ok
[INFO] [stdout] test src/error.rs - error::get_tskit_error_message (line 93) ... ok
[INFO] [stdout] test src/error.rs - error::panic_on_tskit_error (line 65) ... ok
[INFO] [stdout] test src/error.rs - error::get_tskit_error_message (line 77) ... ok
[INFO] [stdout] test src/error.rs - error::panic_on_tskit_error (line 56) ... ok
[INFO] [stdout] test src/error.rs - error::get_tskit_error_message (line 86) ... ok
[INFO] [stdout] test src/edge_table.rs - edge_table::OwningEdgeTable (line 312) ... ok
[INFO] [stdout] test src/flags.rs - flags::NodeFlags (line 577) ... ok
[INFO] [stdout] test src/flags.rs - flags::IndividualTableSortOptions (line 327) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions (line 30) ... ok
[INFO] [stdout] test src/flags.rs - flags::NodeFlags (line 586) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions (line 37) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::filter_populations (line 113) ... ok
[INFO] [stdout] test src/flags.rs - flags::NodeFlags (line 567) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::filter_individuals (line 146) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::keep_unary_in_individuals (line 102) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::reduce_to_site_topology (line 135) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 160) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::keep_input_roots (line 80) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::filter_sites (line 124) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::keep_unary (line 91) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 167) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 172) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 227) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 189) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 220) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 242) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 177) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 475) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 252) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 232) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 237) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 461) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 480) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 470) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 485) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 500) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 490) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 495) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 505) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableSortOptions (line 291) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableOutputOptions (line 395) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeFlags (line 347) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeFlags (line 356) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableSortOptions (line 300) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 283) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeFlags (line 361) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 302) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 221) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 256) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 233) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeSequenceFlags (line 432) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 314) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeSequenceFlags (line 423) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::OwningIndividualTable (line 442) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::OwningIndividualTable (line 455) ... ok
[INFO] [stdout] test src/metadata.rs - metadata (line 76) ... ok
[INFO] [stdout] test src/metadata.rs - metadata (line 30) ... ok
[INFO] [stdout] test src/lib.rs - (line 35) ... ok
[INFO] [stdout] test src/migration_table.rs - migration_table::OwningMigrationTable (line 386) ... ok
[INFO] [stdout] test src/mutation_table.rs - mutation_table::OwningMutationTable (line 362) ... ok
[INFO] [stdout] test src/migration_table.rs - migration_table::OwningMigrationTable (line 374) ... ok
[INFO] [stdout] test src/mutation_table.rs - mutation_table::OwningMutationTable (line 350) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::NodeId (line 40) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::NodeId (line 16) ... ok
[INFO] [stdout] test src/metadata.rs - metadata (line 103) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaultsWithMetadataNotCloneNotDebug (line 376) - compile fail ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaultsWithMetadataNotCloneNotDebug (line 412) - compile fail ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::Time (line 288) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::NodeId (line 56) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::SizeType (line 147) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaults (line 255) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaults (line 245) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 822) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 786) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 811) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 797) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags (line 543) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::population (line 577) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::time_slice_mut (line 745) - compile fail ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 835) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::individual (line 620) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::OwningNodeTable (line 892) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::OwningNodeTable::add_row_with_defaults (line 974) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::OwningNodeTable (line 880) ... ok
[INFO] [stdout] test src/site_table.rs - site_table::OwningSiteTable (line 265) ... ok
[INFO] [stdout] test src/population_table.rs - population_table::OwningPopulationTable (line 225) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::time (line 518) ... ok
[INFO] [stdout] test src/population_table.rs - population_table::OwningPopulationTable (line 213) ... ok
[INFO] [stdout] test src/site_table.rs - site_table::OwningSiteTable (line 277) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::time_slice_mut (line 755) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual (line 293) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge_with_metadata (line 272) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection (line 33) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge (line 223) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge (line 251) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge (line 237) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual_with_metadata (line 334) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual (line 303) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual (line 314) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_migration_with_metadata (line 378) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_mutation_with_metadata (line 529) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_population_with_metadata (line 564) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_node_with_metadata (line 451) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_migration (line 360) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_population (line 549) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_site_with_metadata (line 500) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_node_with_defaults (line 425) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::check_integrity (line 896) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::create_node_id_vector (line 1294) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::check_integrity (line 882) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::new (line 86) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::sequence_length (line 211) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::check_integrity (line 889) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::new (line 92) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::new_from_file (line 165) ... FAILED
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_nodes (line 1007) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_migrations (line 1161) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_individuals (line 1119) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_mutations (line 1080) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_sites (line 1044) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_child_array (line 269) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_sample_array (line 169) - compile fail ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_edges (line 970) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_sib_array (line 229) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::parent_array (line 59) - compile fail ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_populations (line 1200) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::next_sample_array (line 132) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_child_array (line 289) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_sib_array (line 249) - compile fail ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::topological_sort_individuals (line 685) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_sample_array (line 206) - compile fail ... ok
[INFO] [stdout] test src/table_views.rs - table_views::TableViews::create_node_id_vector (line 206) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::samples_array (line 93) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_sample_array (line 155) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence (line 178) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_sample_array (line 192) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::next_sample_array (line 118) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::tree_iterator (line 348) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::samples_array (line 79) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::new (line 218) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::tree_iterator (line 364) - compile ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::create_node_id_vector (line 551) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence (line 159) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::new (line 235) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::new (line 227) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::tree_iterator (line 328) ... ok
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- src/table_collection.rs - table_collection::TableCollection::new_from_file (line 165) stdout ----
[INFO] [stdout] Test executable failed (exit status: 101).
[INFO] [stdout] 
[INFO] [stdout] stderr:
[INFO] [stdout] thread 'main' panicked at src/table_collection.rs:6:71:
[INFO] [stdout] called `Result::unwrap()` on an `Err` value: ErrorCode { code: -3 }
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x555a5bf763e6 - std::backtrace_rs::backtrace::libunwind::trace::h140b6deb6a45c671
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/../../backtrace/src/backtrace/libunwind.rs:104:5
[INFO] [stdout]    1:     0x555a5bf763e6 - std::backtrace_rs::backtrace::trace_unsynchronized::h8450d7e4e9219aed
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stdout]    2:     0x555a5bf763e6 - std::sys_common::backtrace::_print_fmt::hbd28e5e6c6fc3a3f
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/sys_common/backtrace.rs:68:5
[INFO] [stdout]    3:     0x555a5bf763e6 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::hb058f285768cf98e
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/sys_common/backtrace.rs:44:22
[INFO] [stdout]    4:     0x555a5bf988f0 - core::fmt::rt::Argument::fmt::h87dec7a95127da24
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/fmt/rt.rs:142:9
[INFO] [stdout]    5:     0x555a5bf988f0 - core::fmt::write::h873f89a91a4832db
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/fmt/mod.rs:1120:17
[INFO] [stdout]    6:     0x555a5bf746af - std::io::Write::write_fmt::hc65183f01d14754a
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/io/mod.rs:1846:15
[INFO] [stdout]    7:     0x555a5bf761c4 - std::sys_common::backtrace::_print::h7719d1529d9a9e13
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/sys_common/backtrace.rs:47:5
[INFO] [stdout]    8:     0x555a5bf761c4 - std::sys_common::backtrace::print::haa3afbd0e7947108
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/sys_common/backtrace.rs:34:9
[INFO] [stdout]    9:     0x555a5bf77727 - std::panicking::default_hook::{{closure}}::h10e3de2ec0eaff22
[INFO] [stdout]   10:     0x555a5bf77489 - std::panicking::default_hook::hbdc1b1b7fe073dab
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:292:9
[INFO] [stdout]   11:     0x555a5bf77bb8 - std::panicking::rust_panic_with_hook::hb81692602460473d
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:781:13
[INFO] [stdout]   12:     0x555a5bf77a92 - std::panicking::begin_panic_handler::{{closure}}::h2470593aa2678e9c
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:659:13
[INFO] [stdout]   13:     0x555a5bf768e6 - std::sys_common::backtrace::__rust_end_short_backtrace::h560bb50225b0562b
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/sys_common/backtrace.rs:171:18
[INFO] [stdout]   14:     0x555a5bf777e4 - rust_begin_unwind
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:647:5
[INFO] [stdout]   15:     0x555a5bf43fe5 - core::panicking::panic_fmt::h29b6f262f6458dc3
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/panicking.rs:72:14
[INFO] [stdout]   16:     0x555a5bf44583 - core::result::unwrap_failed::h12bc80647957bcdb
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/result.rs:1649:5
[INFO] [stdout]   17:     0x555a5bf48a3a - rust_out::main::_doctest_main_src_table_collection_rs_165_0::h851f7f35beada399
[INFO] [stdout]   18:     0x555a5bf487d6 - rust_out::main::hff4e5118cb484971
[INFO] [stdout]   19:     0x555a5bf453f3 - core::ops::function::FnOnce::call_once::h07035dc3b47525ba
[INFO] [stdout]   20:     0x555a5bf44ab6 - std::sys_common::backtrace::__rust_begin_short_backtrace::h27e28290e6a5ea6b
[INFO] [stdout]   21:     0x555a5bf44f79 - std::rt::lang_start::{{closure}}::hc9e353f29d6b9183
[INFO] [stdout]   22:     0x555a5bf721a1 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::hb70d08830a5ade10
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/ops/function.rs:284:13
[INFO] [stdout]   23:     0x555a5bf721a1 - std::panicking::try::do_call::h22b4f7e5a6651b4a
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:554:40
[INFO] [stdout]   24:     0x555a5bf721a1 - std::panicking::try::hc21d1712e01c2e20
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:518:19
[INFO] [stdout]   25:     0x555a5bf721a1 - std::panic::catch_unwind::h043dedc9b446785f
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panic.rs:142:14
[INFO] [stdout]   26:     0x555a5bf721a1 - std::rt::lang_start_internal::{{closure}}::hd5b437811c37f411
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/rt.rs:148:48
[INFO] [stdout]   27:     0x555a5bf721a1 - std::panicking::try::do_call::hd87c54a927c7af49
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:554:40
[INFO] [stdout]   28:     0x555a5bf721a1 - std::panicking::try::hf94d97659ed75d92
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:518:19
[INFO] [stdout]   29:     0x555a5bf721a1 - std::panic::catch_unwind::h2ddd57de1d25402e
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panic.rs:142:14
[INFO] [stdout]   30:     0x555a5bf721a1 - std::rt::lang_start_internal::h7fecc45801af5220
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/rt.rs:148:20
[INFO] [stdout]   31:     0x555a5bf44f57 - std::rt::lang_start::h613ce2a20714e78a
[INFO] [stdout]   32:     0x555a5bf492a5 - main
[INFO] [stdout]   33:     0x7f20e5147d90 - <unknown>
[INFO] [stdout]   34:     0x7f20e5147e40 - __libc_start_main
[INFO] [stdout]   35:     0x555a5bf44845 - _start
[INFO] [stdout]   36:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     src/table_collection.rs - table_collection::TableCollection::new_from_file (line 165)
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 147 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 23.62s
[INFO] [stdout] 
[INFO] [stderr] error: doctest failed, to rerun pass `--doc`
[INFO] running `Command { std: "docker" "inspect" "b7abce169db44482c9aa70820c98a4770819a176a3faac5af07387aefd1a9d05", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b7abce169db44482c9aa70820c98a4770819a176a3faac5af07387aefd1a9d05", kill_on_drop: false }`
[INFO] [stdout] b7abce169db44482c9aa70820c98a4770819a176a3faac5af07387aefd1a9d05
