[INFO] cloning repository https://github.com/Mimerme/Mimerme
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Mimerme/Mimerme" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMimerme%2FMimerme", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMimerme%2FMimerme'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] df63a69dd00123b2eb2ab3520f84fe54a79a107d
[INFO] testing Mimerme/Mimerme against 1.76.0 for beta-1.77-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMimerme%2FMimerme" "/workspace/builds/worker-1-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/Mimerme/Mimerme on toolchain 1.76.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.76.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/Mimerme/Mimerme
[INFO] finished tweaking git repo https://github.com/Mimerme/Mimerme
[INFO] tweaked toml for git repo https://github.com/Mimerme/Mimerme written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/Mimerme/Mimerme already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.76.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded serde_derive v1.0.105
[INFO] [stderr]   Downloaded bincode v1.2.1
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded snafu-derive v0.6.3
[INFO] [stderr]   Downloaded bio-types v0.6.0
[INFO] [stderr]   Downloaded nom v5.1.1
[INFO] [stderr]   Downloaded bindgen v0.53.2
[INFO] [stderr]   Downloaded libc v0.2.68
[INFO] [stderr]   Downloaded hts-sys v1.10.2
[INFO] [stderr]   Downloaded syn v1.0.17
[INFO] [stderr]   Downloaded serde v1.0.105
[INFO] [stderr]   Downloaded clang-sys v0.29.2
[INFO] [stderr]   Downloaded snafu v0.6.0
[INFO] [stderr]   Downloaded rust-htslib v0.29.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.76.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 3e5448dde40c57a91e93cff74ec387e0fe2c5b4f095cfe80338be4a81982ce28
[INFO] running `Command { std: "docker" "start" "-a" "3e5448dde40c57a91e93cff74ec387e0fe2c5b4f095cfe80338be4a81982ce28", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "3e5448dde40c57a91e93cff74ec387e0fe2c5b4f095cfe80338be4a81982ce28", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3e5448dde40c57a91e93cff74ec387e0fe2c5b4f095cfe80338be4a81982ce28", kill_on_drop: false }`
[INFO] [stdout] 3e5448dde40c57a91e93cff74ec387e0fe2c5b4f095cfe80338be4a81982ce28
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.76.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a5dac18444ea0d2b7ddefb39d23b11968844148dd390782413a381f82cfb179b
[INFO] running `Command { std: "docker" "start" "-a" "a5dac18444ea0d2b7ddefb39d23b11968844148dd390782413a381f82cfb179b", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.9
[INFO] [stderr]    Compiling cc v1.0.50
[INFO] [stderr]    Compiling syn v1.0.17
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]    Compiling version_check v0.9.1
[INFO] [stderr]    Compiling libc v0.2.68
[INFO] [stderr]    Compiling regex-syntax v0.6.17
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling bindgen v0.53.2
[INFO] [stderr]    Compiling serde v1.0.105
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling thread_local v1.0.1
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]    Compiling aho-corasick v0.7.10
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]    Compiling lazycell v1.2.1
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling smallvec v1.2.0
[INFO] [stderr]    Compiling matches v0.1.8
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling unicode-bidi v0.3.4
[INFO] [stderr]    Compiling unicode-normalization v0.1.12
[INFO] [stderr]    Compiling byteorder v1.3.4
[INFO] [stderr]    Compiling percent-encoding v2.1.0
[INFO] [stderr]    Compiling either v1.5.3
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling nom v5.1.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling itertools v0.8.2
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling clang-sys v0.29.2
[INFO] [stderr]    Compiling libloading v0.5.2
[INFO] [stderr]    Compiling libz-sys v1.0.25
[INFO] [stderr]    Compiling quote v1.0.3
[INFO] [stderr]    Compiling idna v0.2.0
[INFO] [stderr]    Compiling url v2.1.1
[INFO] [stderr]    Compiling regex v1.3.6
[INFO] [stderr]    Compiling cexpr v0.4.0
[INFO] [stderr]    Compiling serde_derive v1.0.105
[INFO] [stderr]    Compiling snafu-derive v0.6.3
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling snafu v0.6.0
[INFO] [stderr]    Compiling hts-sys v1.10.2
[INFO] [stderr]    Compiling bio-types v0.6.0
[INFO] [stderr]    Compiling bincode v1.2.1
[INFO] [stderr]    Compiling rust-htslib v0.29.0
[INFO] [stderr]    Compiling fmmap v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `std::str::Chars`
[INFO] [stdout]  --> src/main.rs:8:5
[INFO] [stdout]   |
[INFO] [stdout] 8 | use std::str::Chars;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::iter::Rev`
[INFO] [stdout]  --> src/main.rs:9:5
[INFO] [stdout]   |
[INFO] [stdout] 9 | use std::iter::Rev;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Aux`
[INFO] [stdout]   --> src/main.rs:12:45
[INFO] [stdout]    |
[INFO] [stdout] 12 | use rust_htslib::bam::record::{CigarString, Aux, Cigar};
[INFO] [stdout]    |                                             ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::convert::TryFrom`
[INFO] [stdout]   --> src/main.rs:14:5
[INFO] [stdout]    |
[INFO] [stdout] 14 | use std::convert::TryFrom;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `thread`, `time`
[INFO] [stdout]   --> src/main.rs:15:11
[INFO] [stdout]    |
[INFO] [stdout] 15 | use std::{thread, time};
[INFO] [stdout]    |           ^^^^^^  ^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary trailing semicolon
[INFO] [stdout]    --> src/main.rs:356:3
[INFO] [stdout]     |
[INFO] [stdout] 356 |     };
[INFO] [stdout]     |      ^ help: remove this semicolon
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(redundant_semicolons)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:110:7
[INFO] [stdout]     |
[INFO] [stdout] 110 |         let mut c1 = remaining_query.next().unwrap();
[INFO] [stdout]     |             ----^^
[INFO] [stdout]     |             |
[INFO] [stdout]     |             help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `seed_pos`
[INFO] [stdout]    --> src/main.rs:392:7
[INFO] [stdout]     |
[INFO] [stdout] 392 |         let seed_pos = 0;
[INFO] [stdout]     |             ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seed_pos`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:659:6
[INFO] [stdout]     |
[INFO] [stdout] 659 |     let mut sequence = 
[INFO] [stdout]     |         ----^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:665:11
[INFO] [stdout]     |
[INFO] [stdout] 665 |                         let mut sequence = fs::read_to_string(input_file)
[INFO] [stdout]     |                             ----^^^^^^^^
[INFO] [stdout]     |                             |
[INFO] [stdout]     |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:669:11
[INFO] [stdout]     |
[INFO] [stdout] 669 |                         let mut split = sequence.split("\n");
[INFO] [stdout]     |                             ----^^^^^
[INFO] [stdout]     |                             |
[INFO] [stdout]     |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:792:6
[INFO] [stdout]     |
[INFO] [stdout] 792 |     let mut sequence = 
[INFO] [stdout]     |         ----^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:796:9
[INFO] [stdout]     |
[INFO] [stdout] 796 |                 let mut sequence = fs::read_to_string(input_file)
[INFO] [stdout]     |                     ----^^^^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:800:9
[INFO] [stdout]     |
[INFO] [stdout] 800 |                 let mut split = sequence.split("\n");
[INFO] [stdout]     |                     ----^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `name` and `id` are never read
[INFO] [stdout]   --> src/main.rs:62:2
[INFO] [stdout]    |
[INFO] [stdout] 61 | struct GenRead{
[INFO] [stdout]    |        ------- fields in this struct
[INFO] [stdout] 62 |     name: String,
[INFO] [stdout]    |     ^^^^
[INFO] [stdout] 63 |     id : u32,
[INFO] [stdout]    |     ^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `print_2d_vec` is never used
[INFO] [stdout]    --> src/main.rs:193:4
[INFO] [stdout]     |
[INFO] [stdout] 193 | fn print_2d_vec<T : Debug>(matrix : &Vec<Vec<T>>){
[INFO] [stdout]     |    ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `fitting_alignment` is never used
[INFO] [stdout]    --> src/main.rs:203:4
[INFO] [stdout]     |
[INFO] [stdout] 203 | fn fitting_alignment(x : &str, y : &str) -> Vec<Alignment> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `add` is never used
[INFO] [stdout]    --> src/main.rs:450:4
[INFO] [stdout]     |
[INFO] [stdout] 450 | fn add(a : &mut Vec<i32>){
[INFO] [stdout]     |    ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `gold` is never used
[INFO] [stdout]    --> src/main.rs:459:4
[INFO] [stdout]     |
[INFO] [stdout] 459 | fn gold() -> (
[INFO] [stdout]     |    ^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `CIGAR` should have a snake case name
[INFO] [stdout]   --> src/main.rs:70:2
[INFO] [stdout]    |
[INFO] [stdout] 70 |     CIGAR : Vec<Cigar>,
[INFO] [stdout]    |     ^^^^^ help: convert the identifier to snake case: `cigar`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(non_snake_case)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused `Result` that must be used
[INFO] [stdout]    --> src/main.rs:368:2
[INFO] [stdout]     |
[INFO] [stdout] 368 |     file.read_to_end(&mut data);
[INFO] [stdout]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this `Result` may be an `Err` variant, which should be handled
[INFO] [stdout]     = note: `#[warn(unused_must_use)]` on by default
[INFO] [stdout] help: use `let _ = ...` to ignore the resulting value
[INFO] [stdout]     |
[INFO] [stdout] 368 |     let _ = file.read_to_end(&mut data);
[INFO] [stdout]     |     +++++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `gap` should have an upper case name
[INFO] [stdout]    --> src/main.rs:384:8
[INFO] [stdout]     |
[INFO] [stdout] 384 |     const gap : usize = 5;
[INFO] [stdout]     |           ^^^ help: convert the identifier to upper case: `GAP`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(non_upper_case_globals)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `L_col` should have a snake case name
[INFO] [stdout]    --> src/main.rs:711:10
[INFO] [stdout]     |
[INFO] [stdout] 711 |     let mut L_col = Vec::<char>::new();
[INFO] [stdout]     |             ^^^^^ help: convert the identifier to snake case: `l_col`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `F_col` should have a snake case name
[INFO] [stdout]    --> src/main.rs:712:10
[INFO] [stdout]     |
[INFO] [stdout] 712 |     let mut F_col = Vec::<char>::new();
[INFO] [stdout]     |             ^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `F_col_compressed` should have a snake case name
[INFO] [stdout]    --> src/main.rs:752:10
[INFO] [stdout]     |
[INFO] [stdout] 752 |     let mut F_col_compressed = HashMap::<char, usize>::new();
[INFO] [stdout]     |             ^^^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col_compressed`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 25 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 15.57s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: bindgen v0.53.2, nom v5.1.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "a5dac18444ea0d2b7ddefb39d23b11968844148dd390782413a381f82cfb179b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a5dac18444ea0d2b7ddefb39d23b11968844148dd390782413a381f82cfb179b", kill_on_drop: false }`
[INFO] [stdout] a5dac18444ea0d2b7ddefb39d23b11968844148dd390782413a381f82cfb179b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.76.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 92d6d897ecd67cc679ff5603639c30fbd4f88315533325b66db38ecb26573ccb
[INFO] running `Command { std: "docker" "start" "-a" "92d6d897ecd67cc679ff5603639c30fbd4f88315533325b66db38ecb26573ccb", kill_on_drop: false }`
[INFO] [stderr]    Compiling fmmap v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `std::str::Chars`
[INFO] [stdout]  --> src/main.rs:8:5
[INFO] [stdout]   |
[INFO] [stdout] 8 | use std::str::Chars;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::iter::Rev`
[INFO] [stdout]  --> src/main.rs:9:5
[INFO] [stdout]   |
[INFO] [stdout] 9 | use std::iter::Rev;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Aux`
[INFO] [stdout]   --> src/main.rs:12:45
[INFO] [stdout]    |
[INFO] [stdout] 12 | use rust_htslib::bam::record::{CigarString, Aux, Cigar};
[INFO] [stdout]    |                                             ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::convert::TryFrom`
[INFO] [stdout]   --> src/main.rs:14:5
[INFO] [stdout]    |
[INFO] [stdout] 14 | use std::convert::TryFrom;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `thread`, `time`
[INFO] [stdout]   --> src/main.rs:15:11
[INFO] [stdout]    |
[INFO] [stdout] 15 | use std::{thread, time};
[INFO] [stdout]    |           ^^^^^^  ^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary trailing semicolon
[INFO] [stdout]    --> src/main.rs:356:3
[INFO] [stdout]     |
[INFO] [stdout] 356 |     };
[INFO] [stdout]     |      ^ help: remove this semicolon
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(redundant_semicolons)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:110:7
[INFO] [stdout]     |
[INFO] [stdout] 110 |         let mut c1 = remaining_query.next().unwrap();
[INFO] [stdout]     |             ----^^
[INFO] [stdout]     |             |
[INFO] [stdout]     |             help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `seed_pos`
[INFO] [stdout]    --> src/main.rs:392:7
[INFO] [stdout]     |
[INFO] [stdout] 392 |         let seed_pos = 0;
[INFO] [stdout]     |             ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seed_pos`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `seqs`
[INFO] [stdout]    --> src/main.rs:516:16
[INFO] [stdout]     |
[INFO] [stdout] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stdout]     |                ^^^^ help: if this is intentional, prefix it with an underscore: `_seqs`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `quals`
[INFO] [stdout]    --> src/main.rs:516:22
[INFO] [stdout]     |
[INFO] [stdout] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stdout]     |                      ^^^^^ help: if this is intentional, prefix it with an underscore: `_quals`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `cigars`
[INFO] [stdout]    --> src/main.rs:516:29
[INFO] [stdout]     |
[INFO] [stdout] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stdout]     |                             ^^^^^^ help: if this is intentional, prefix it with an underscore: `_cigars`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `name`
[INFO] [stdout]    --> src/main.rs:532:17
[INFO] [stdout]     |
[INFO] [stdout] 532 |             for name in names.iter() {
[INFO] [stdout]     |                 ^^^^ help: if this is intentional, prefix it with an underscore: `_name`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `sam`
[INFO] [stdout]    --> src/main.rs:548:13
[INFO] [stdout]     |
[INFO] [stdout] 548 |     let mut sam = Writer::from_path("test123.sam", &header, Format::SAM);
[INFO] [stdout]     |             ^^^ help: if this is intentional, prefix it with an underscore: `_sam`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:548:9
[INFO] [stdout]     |
[INFO] [stdout] 548 |     let mut sam = Writer::from_path("test123.sam", &header, Format::SAM);
[INFO] [stdout]     |         ----^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:659:6
[INFO] [stdout]     |
[INFO] [stdout] 659 |     let mut sequence = 
[INFO] [stdout]     |         ----^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:665:11
[INFO] [stdout]     |
[INFO] [stdout] 665 |                         let mut sequence = fs::read_to_string(input_file)
[INFO] [stdout]     |                             ----^^^^^^^^
[INFO] [stdout]     |                             |
[INFO] [stdout]     |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:669:11
[INFO] [stdout]     |
[INFO] [stdout] 669 |                         let mut split = sequence.split("\n");
[INFO] [stdout]     |                             ----^^^^^
[INFO] [stdout]     |                             |
[INFO] [stdout]     |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:792:6
[INFO] [stdout]     |
[INFO] [stdout] 792 |     let mut sequence = 
[INFO] [stdout]     |         ----^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:796:9
[INFO] [stdout]     |
[INFO] [stdout] 796 |                 let mut sequence = fs::read_to_string(input_file)
[INFO] [stdout]     |                     ----^^^^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:800:9
[INFO] [stdout]     |
[INFO] [stdout] 800 |                 let mut split = sequence.split("\n");
[INFO] [stdout]     |                     ----^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `name` and `id` are never read
[INFO] [stdout]   --> src/main.rs:62:2
[INFO] [stdout]    |
[INFO] [stdout] 61 | struct GenRead{
[INFO] [stdout]    |        ------- fields in this struct
[INFO] [stdout] 62 |     name: String,
[INFO] [stdout]    |     ^^^^
[INFO] [stdout] 63 |     id : u32,
[INFO] [stdout]    |     ^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `print_2d_vec` is never used
[INFO] [stdout]    --> src/main.rs:193:4
[INFO] [stdout]     |
[INFO] [stdout] 193 | fn print_2d_vec<T : Debug>(matrix : &Vec<Vec<T>>){
[INFO] [stdout]     |    ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `fitting_alignment` is never used
[INFO] [stdout]    --> src/main.rs:203:4
[INFO] [stdout]     |
[INFO] [stdout] 203 | fn fitting_alignment(x : &str, y : &str) -> Vec<Alignment> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `CIGAR` should have a snake case name
[INFO] [stdout]   --> src/main.rs:70:2
[INFO] [stdout]    |
[INFO] [stdout] 70 |     CIGAR : Vec<Cigar>,
[INFO] [stdout]    |     ^^^^^ help: convert the identifier to snake case: `cigar`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(non_snake_case)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused `Result` that must be used
[INFO] [stdout]    --> src/main.rs:368:2
[INFO] [stdout]     |
[INFO] [stdout] 368 |     file.read_to_end(&mut data);
[INFO] [stdout]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this `Result` may be an `Err` variant, which should be handled
[INFO] [stdout]     = note: `#[warn(unused_must_use)]` on by default
[INFO] [stdout] help: use `let _ = ...` to ignore the resulting value
[INFO] [stdout]     |
[INFO] [stdout] 368 |     let _ = file.read_to_end(&mut data);
[INFO] [stdout]     |     +++++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `gap` should have an upper case name
[INFO] [stdout]    --> src/main.rs:384:8
[INFO] [stdout]     |
[INFO] [stdout] 384 |     const gap : usize = 5;
[INFO] [stdout]     |           ^^^ help: convert the identifier to upper case: `GAP`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(non_upper_case_globals)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `L_col` should have a snake case name
[INFO] [stdout]    --> src/main.rs:711:10
[INFO] [stdout]     |
[INFO] [stdout] 711 |     let mut L_col = Vec::<char>::new();
[INFO] [stdout]     |             ^^^^^ help: convert the identifier to snake case: `l_col`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `F_col` should have a snake case name
[INFO] [stdout]    --> src/main.rs:712:10
[INFO] [stdout]     |
[INFO] [stdout] 712 |     let mut F_col = Vec::<char>::new();
[INFO] [stdout]     |             ^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `F_col_compressed` should have a snake case name
[INFO] [stdout]    --> src/main.rs:752:10
[INFO] [stdout]     |
[INFO] [stdout] 752 |     let mut F_col_compressed = HashMap::<char, usize>::new();
[INFO] [stdout]     |             ^^^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col_compressed`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 29 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.79s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: bindgen v0.53.2, nom v5.1.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "92d6d897ecd67cc679ff5603639c30fbd4f88315533325b66db38ecb26573ccb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "92d6d897ecd67cc679ff5603639c30fbd4f88315533325b66db38ecb26573ccb", kill_on_drop: false }`
[INFO] [stdout] 92d6d897ecd67cc679ff5603639c30fbd4f88315533325b66db38ecb26573ccb
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.76.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 6f96329791893a3fa829427ecbfec1be5b8904bc954bc4d320db240c8f9abe28
[INFO] running `Command { std: "docker" "start" "-a" "6f96329791893a3fa829427ecbfec1be5b8904bc954bc4d320db240c8f9abe28", kill_on_drop: false }`
[INFO] [stderr] warning: unused import: `std::str::Chars`
[INFO] [stderr]  --> src/main.rs:8:5
[INFO] [stderr]   |
[INFO] [stderr] 8 | use std::str::Chars;
[INFO] [stderr]   |     ^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `std::iter::Rev`
[INFO] [stderr]  --> src/main.rs:9:5
[INFO] [stderr]   |
[INFO] [stderr] 9 | use std::iter::Rev;
[INFO] [stderr]   |     ^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `Aux`
[INFO] [stderr]   --> src/main.rs:12:45
[INFO] [stderr]    |
[INFO] [stderr] 12 | use rust_htslib::bam::record::{CigarString, Aux, Cigar};
[INFO] [stderr]    |                                             ^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `std::convert::TryFrom`
[INFO] [stderr]   --> src/main.rs:14:5
[INFO] [stderr]    |
[INFO] [stderr] 14 | use std::convert::TryFrom;
[INFO] [stderr]    |     ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused imports: `thread`, `time`
[INFO] [stderr]   --> src/main.rs:15:11
[INFO] [stderr]    |
[INFO] [stderr] 15 | use std::{thread, time};
[INFO] [stderr]    |           ^^^^^^  ^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unnecessary trailing semicolon
[INFO] [stderr]    --> src/main.rs:356:3
[INFO] [stderr]     |
[INFO] [stderr] 356 |     };
[INFO] [stderr]     |      ^ help: remove this semicolon
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(redundant_semicolons)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:110:7
[INFO] [stderr]     |
[INFO] [stderr] 110 |         let mut c1 = remaining_query.next().unwrap();
[INFO] [stderr]     |             ----^^
[INFO] [stderr]     |             |
[INFO] [stderr]     |             help: remove this `mut`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_mut)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `seed_pos`
[INFO] [stderr]    --> src/main.rs:392:7
[INFO] [stderr]     |
[INFO] [stderr] 392 |         let seed_pos = 0;
[INFO] [stderr]     |             ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seed_pos`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `seqs`
[INFO] [stderr]    --> src/main.rs:516:16
[INFO] [stderr]     |
[INFO] [stderr] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stderr]     |                ^^^^ help: if this is intentional, prefix it with an underscore: `_seqs`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `quals`
[INFO] [stderr]    --> src/main.rs:516:22
[INFO] [stderr]     |
[INFO] [stderr] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stderr]     |                      ^^^^^ help: if this is intentional, prefix it with an underscore: `_quals`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `cigars`
[INFO] [stderr]    --> src/main.rs:516:29
[INFO] [stderr]     |
[INFO] [stderr] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stderr]     |                             ^^^^^^ help: if this is intentional, prefix it with an underscore: `_cigars`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `name`
[INFO] [stderr]    --> src/main.rs:532:17
[INFO] [stderr]     |
[INFO] [stderr] 532 |             for name in names.iter() {
[INFO] [stderr]     |                 ^^^^ help: if this is intentional, prefix it with an underscore: `_name`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `sam`
[INFO] [stderr]    --> src/main.rs:548:13
[INFO] [stderr]     |
[INFO] [stderr] 548 |     let mut sam = Writer::from_path("test123.sam", &header, Format::SAM);
[INFO] [stderr]     |             ^^^ help: if this is intentional, prefix it with an underscore: `_sam`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:548:9
[INFO] [stderr]     |
[INFO] [stderr] 548 |     let mut sam = Writer::from_path("test123.sam", &header, Format::SAM);
[INFO] [stderr]     |         ----^^^
[INFO] [stderr]     |         |
[INFO] [stderr]     |         help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:659:6
[INFO] [stderr]     |
[INFO] [stderr] 659 |     let mut sequence = 
[INFO] [stderr]     |         ----^^^^^^^^
[INFO] [stderr]     |         |
[INFO] [stderr]     |         help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:665:11
[INFO] [stderr]     |
[INFO] [stderr] 665 |                         let mut sequence = fs::read_to_string(input_file)
[INFO] [stderr]     |                             ----^^^^^^^^
[INFO] [stderr]     |                             |
[INFO] [stderr]     |                             help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:669:11
[INFO] [stderr]     |
[INFO] [stderr] 669 |                         let mut split = sequence.split("\n");
[INFO] [stderr]     |                             ----^^^^^
[INFO] [stderr]     |                             |
[INFO] [stderr]     |                             help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:792:6
[INFO] [stderr]     |
[INFO] [stderr] 792 |     let mut sequence = 
[INFO] [stderr]     |         ----^^^^^^^^
[INFO] [stderr]     |         |
[INFO] [stderr]     |         help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:796:9
[INFO] [stderr]     |
[INFO] [stderr] 796 |                 let mut sequence = fs::read_to_string(input_file)
[INFO] [stderr]     |                     ----^^^^^^^^
[INFO] [stderr]     |                     |
[INFO] [stderr]     |                     help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:800:9
[INFO] [stderr]     |
[INFO] [stderr] 800 |                 let mut split = sequence.split("\n");
[INFO] [stderr]     |                     ----^^^^^
[INFO] [stderr]     |                     |
[INFO] [stderr]     |                     help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: fields `name` and `id` are never read
[INFO] [stderr]   --> src/main.rs:62:2
[INFO] [stderr]    |
[INFO] [stderr] 61 | struct GenRead{
[INFO] [stderr]    |        ------- fields in this struct
[INFO] [stderr] 62 |     name: String,
[INFO] [stderr]    |     ^^^^
[INFO] [stderr] 63 |     id : u32,
[INFO] [stderr]    |     ^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: function `print_2d_vec` is never used
[INFO] [stderr]    --> src/main.rs:193:4
[INFO] [stderr]     |
[INFO] [stderr] 193 | fn print_2d_vec<T : Debug>(matrix : &Vec<Vec<T>>){
[INFO] [stderr]     |    ^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: function `fitting_alignment` is never used
[INFO] [stderr]    --> src/main.rs:203:4
[INFO] [stderr]     |
[INFO] [stderr] 203 | fn fitting_alignment(x : &str, y : &str) -> Vec<Alignment> {
[INFO] [stderr]     |    ^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: structure field `CIGAR` should have a snake case name
[INFO] [stderr]   --> src/main.rs:70:2
[INFO] [stderr]    |
[INFO] [stderr] 70 |     CIGAR : Vec<Cigar>,
[INFO] [stderr]    |     ^^^^^ help: convert the identifier to snake case: `cigar`
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(non_snake_case)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused `Result` that must be used
[INFO] [stderr]    --> src/main.rs:368:2
[INFO] [stderr]     |
[INFO] [stderr] 368 |     file.read_to_end(&mut data);
[INFO] [stderr]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: this `Result` may be an `Err` variant, which should be handled
[INFO] [stderr]     = note: `#[warn(unused_must_use)]` on by default
[INFO] [stderr] help: use `let _ = ...` to ignore the resulting value
[INFO] [stderr]     |
[INFO] [stderr] 368 |     let _ = file.read_to_end(&mut data);
[INFO] [stderr]     |     +++++++
[INFO] [stderr] 
[INFO] [stderr] warning: constant `gap` should have an upper case name
[INFO] [stderr]    --> src/main.rs:384:8
[INFO] [stderr]     |
[INFO] [stderr] 384 |     const gap : usize = 5;
[INFO] [stderr]     |           ^^^ help: convert the identifier to upper case: `GAP`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(non_upper_case_globals)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: variable `L_col` should have a snake case name
[INFO] [stderr]    --> src/main.rs:711:10
[INFO] [stderr]     |
[INFO] [stderr] 711 |     let mut L_col = Vec::<char>::new();
[INFO] [stderr]     |             ^^^^^ help: convert the identifier to snake case: `l_col`
[INFO] [stderr] 
[INFO] [stderr] warning: variable `F_col` should have a snake case name
[INFO] [stderr]    --> src/main.rs:712:10
[INFO] [stderr]     |
[INFO] [stderr] 712 |     let mut F_col = Vec::<char>::new();
[INFO] [stderr]     |             ^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col`
[INFO] [stderr] 
[INFO] [stderr] warning: variable `F_col_compressed` should have a snake case name
[INFO] [stderr]    --> src/main.rs:752:10
[INFO] [stderr]     |
[INFO] [stderr] 752 |     let mut F_col_compressed = HashMap::<char, usize>::new();
[INFO] [stderr]     |             ^^^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col_compressed`
[INFO] [stderr] 
[INFO] [stderr] warning: `fmmap` (bin "fmmap" test) generated 29 warnings (run `cargo fix --bin "fmmap" --tests` to apply 19 suggestions)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.06s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: bindgen v0.53.2, nom v5.1.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/fmmap-001cce0e9c80e57e)
[INFO] [stdout] 
[INFO] [stdout] running 4 tests
[INFO] [stderr] [E::hts_open_format] Failed to open file "test123.sam" : Read-only file system
[INFO] [stdout] test test_borrow ... ok
[INFO] [stderr] [E::hts_open_format] Failed to open file "yeet.sam" : Read-only file system
[INFO] [stdout] test test_write_sam2 ... ok
[INFO] [stdout] test test_fitting_alignment2 ... ok
[INFO] [stdout] test test_write_sam ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- test_write_sam stdout ----
[INFO] [stdout] thread 'test_write_sam' panicked at src/main.rs:530:14:
[INFO] [stdout] Error opening file.
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x55734469b466 - std::backtrace_rs::backtrace::libunwind::trace::hbee8a7973eeb6c93
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/../../backtrace/src/backtrace/libunwind.rs:104:5
[INFO] [stdout]    1:     0x55734469b466 - std::backtrace_rs::backtrace::trace_unsynchronized::hc8ac75eea3aa6899
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stdout]    2:     0x55734469b466 - std::sys_common::backtrace::_print_fmt::hc7f3e3b5298b1083
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:68:5
[INFO] [stdout]    3:     0x55734469b466 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::hbb235daedd7c6190
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:44:22
[INFO] [stdout]    4:     0x5573446c4330 - core::fmt::rt::Argument::fmt::h76c38a80d925a410
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/fmt/rt.rs:142:9
[INFO] [stdout]    5:     0x5573446c4330 - core::fmt::write::h3ed6aeaa977c8e45
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/fmt/mod.rs:1120:17
[INFO] [stdout]    6:     0x557344698ecf - std::io::Write::write_fmt::h1299aa7741865f2b
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/io/mod.rs:1810:15
[INFO] [stdout]    7:     0x55734469b244 - std::sys_common::backtrace::_print::h5d645a07e0fcfdbb
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:47:5
[INFO] [stdout]    8:     0x55734469b244 - std::sys_common::backtrace::print::h85035a511aafe7a8
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:34:9
[INFO] [stdout]    9:     0x55734469cfb7 - std::panicking::default_hook::{{closure}}::hcce8cea212785a25
[INFO] [stdout]   10:     0x55734469cc9d - std::panicking::default_hook::hf5fcb0f213fe709a
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:289:9
[INFO] [stdout]   11:     0x557344605897 - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::h60265c2dfa87ee34
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/alloc/src/boxed.rs:2029:9
[INFO] [stdout]   12:     0x557344605897 - test::test_main::{{closure}}::h77865bd3127078c6
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/test/src/lib.rs:138:21
[INFO] [stdout]   13:     0x55734469d5d6 - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::hbc5ccf4eb663e1e5
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/alloc/src/boxed.rs:2029:9
[INFO] [stdout]   14:     0x55734469d5d6 - std::panicking::rust_panic_with_hook::h095fccf1dc9379ee
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:783:13
[INFO] [stdout]   15:     0x55734469d322 - std::panicking::begin_panic_handler::{{closure}}::h032ba12139b353db
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:657:13
[INFO] [stdout]   16:     0x55734469b966 - std::sys_common::backtrace::__rust_end_short_backtrace::h9259bc2ff8fd0f76
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:171:18
[INFO] [stdout]   17:     0x55734469d080 - rust_begin_unwind
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:645:5
[INFO] [stdout]   18:     0x5573445c3295 - core::panicking::panic_fmt::h784f20a50eaab275
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/panicking.rs:72:14
[INFO] [stdout]   19:     0x5573445c3253 - core::panicking::panic_display::h251010ce5e0560d5
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/panicking.rs:196:5
[INFO] [stdout]   20:     0x5573445c3253 - core::panicking::panic_str::h6f89534c81f0edc4
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/panicking.rs:171:5
[INFO] [stdout]   21:     0x5573445c3253 - core::option::expect_failed::hc85eb6037a3050f7
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/option.rs:1980:5
[INFO] [stdout]   22:     0x5573445c7049 - core::option::Option<T>::expect::h9ed918f87b9227ac
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/option.rs:894:21
[INFO] [stdout]   23:     0x5573445cfc2a - fmmap::test_write_sam::h236d3c658ddab444
[INFO] [stdout]                                at /opt/rustwide/workdir/src/main.rs:519:27
[INFO] [stdout]   24:     0x5573445cf907 - fmmap::test_write_sam::{{closure}}::h65849a7da6abcf42
[INFO] [stdout]                                at /opt/rustwide/workdir/src/main.rs:514:20
[INFO] [stdout]   25:     0x5573445c5726 - core::ops::function::FnOnce::call_once::h0bc6353ef3b42d8d
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   26:     0x55734460b16f - core::ops::function::FnOnce::call_once::h8dc6907944022cf6
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   27:     0x55734460b16f - test::__rust_begin_short_backtrace::haae1a87433f1efb3
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/test/src/lib.rs:627:18
[INFO] [stdout]   28:     0x557344609ef1 - test::run_test_in_process::{{closure}}::h8c7decfa7c14e152
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/test/src/lib.rs:650:60
[INFO] [stdout]   29:     0x557344609ef1 - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::h19e6ff056d9d21e9
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/panic/unwind_safe.rs:272:9
[INFO] [stdout]   30:     0x557344609ef1 - std::panicking::try::do_call::h89c848fcaa37c035
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:552:40
[INFO] [stdout]   31:     0x557344609ef1 - std::panicking::try::h57ab3dc74e2839b8
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:516:19
[INFO] [stdout]   32:     0x557344609ef1 - std::panic::catch_unwind::hfb6a1b1abc120fb9
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panic.rs:142:14
[INFO] [stdout]   33:     0x557344609ef1 - test::run_test_in_process::h5ae2f9875edd562d
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/test/src/lib.rs:650:27
[INFO] [stdout]   34:     0x557344609ef1 - test::run_test::{{closure}}::h35d7300d8928a067
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/test/src/lib.rs:573:43
[INFO] [stdout]   35:     0x5573445d1226 - test::run_test::{{closure}}::h7525ced405d23d1b
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/test/src/lib.rs:601:41
[INFO] [stdout]   36:     0x5573445d1226 - std::sys_common::backtrace::__rust_begin_short_backtrace::h4e7db78ce05afad8
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys_common/backtrace.rs:155:18
[INFO] [stdout]   37:     0x5573445d6287 - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::hcfbcb64f1a1b3482
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/thread/mod.rs:529:17
[INFO] [stdout]   38:     0x5573445d6287 - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::h9d89c5c4108bd689
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/panic/unwind_safe.rs:272:9
[INFO] [stdout]   39:     0x5573445d6287 - std::panicking::try::do_call::h8a4869bc94ec50c9
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:552:40
[INFO] [stdout]   40:     0x5573445d6287 - std::panicking::try::h9a576f20ff81ac30
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panicking.rs:516:19
[INFO] [stdout]   41:     0x5573445d6287 - std::panic::catch_unwind::hbcb4e3f860ef9830
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/panic.rs:142:14
[INFO] [stdout]   42:     0x5573445d6287 - std::thread::Builder::spawn_unchecked_::{{closure}}::h93c79a6be1505948
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/thread/mod.rs:528:30
[INFO] [stdout]   43:     0x5573445d6287 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h426d96740c81bdaf
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   44:     0x5573446a2105 - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::h12de4fc57affb195
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/alloc/src/boxed.rs:2015:9
[INFO] [stdout]   45:     0x5573446a2105 - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::h3c619f45059d5cf1
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/alloc/src/boxed.rs:2015:9
[INFO] [stdout]   46:     0x5573446a2105 - std::sys::unix::thread::Thread::new::thread_start::hbac657605e4b7389
[INFO] [stdout]                                at /rustc/07dca489ac2d933c78d3c5158e3f43beefeb02ce/library/std/src/sys/unix/thread.rs:108:17
[INFO] [stdout]   47:     0x7f8878fecac3 - <unknown>
[INFO] [stdout]   48:     0x7f887907dbf4 - __clone
[INFO] [stdout]   49:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     test_write_sam
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 3 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--bin fmmap`
[INFO] running `Command { std: "docker" "inspect" "6f96329791893a3fa829427ecbfec1be5b8904bc954bc4d320db240c8f9abe28", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6f96329791893a3fa829427ecbfec1be5b8904bc954bc4d320db240c8f9abe28", kill_on_drop: false }`
[INFO] [stdout] 6f96329791893a3fa829427ecbfec1be5b8904bc954bc4d320db240c8f9abe28
[INFO] testing Mimerme/Mimerme against beta-2024-02-10 for beta-1.77-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMimerme%2FMimerme" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/Mimerme/Mimerme on toolchain beta-2024-02-10
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2024-02-10" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/Mimerme/Mimerme
[INFO] finished tweaking git repo https://github.com/Mimerme/Mimerme
[INFO] tweaked toml for git repo https://github.com/Mimerme/Mimerme written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] crate git repo https://github.com/Mimerme/Mimerme already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2024-02-10" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-02-10" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] b9e54e066af3838f454966798a59fde2a54464ce5e9c4ff87e9107921ce0d9d5
[INFO] running `Command { std: "docker" "start" "-a" "b9e54e066af3838f454966798a59fde2a54464ce5e9c4ff87e9107921ce0d9d5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b9e54e066af3838f454966798a59fde2a54464ce5e9c4ff87e9107921ce0d9d5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b9e54e066af3838f454966798a59fde2a54464ce5e9c4ff87e9107921ce0d9d5", kill_on_drop: false }`
[INFO] [stdout] b9e54e066af3838f454966798a59fde2a54464ce5e9c4ff87e9107921ce0d9d5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-02-10" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] f9324e4ae041d2ca006e3958102055d791a7bf67db0cf8d665d4ca8afd621249
[INFO] running `Command { std: "docker" "start" "-a" "f9324e4ae041d2ca006e3958102055d791a7bf67db0cf8d665d4ca8afd621249", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.9
[INFO] [stderr]    Compiling cc v1.0.50
[INFO] [stderr]    Compiling syn v1.0.17
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]    Compiling libc v0.2.68
[INFO] [stderr]    Compiling version_check v0.9.1
[INFO] [stderr]    Compiling regex-syntax v0.6.17
[INFO] [stderr]    Compiling bindgen v0.53.2
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling serde v1.0.105
[INFO] [stderr]    Compiling lazycell v1.2.1
[INFO] [stderr]    Compiling thread_local v1.0.1
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]    Compiling aho-corasick v0.7.10
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling smallvec v1.2.0
[INFO] [stderr]    Compiling matches v0.1.8
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling unicode-bidi v0.3.4
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling unicode-normalization v0.1.12
[INFO] [stderr]    Compiling byteorder v1.3.4
[INFO] [stderr]    Compiling nom v5.1.1
[INFO] [stderr]    Compiling percent-encoding v2.1.0
[INFO] [stderr]    Compiling either v1.5.3
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling clang-sys v0.29.2
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling itertools v0.8.2
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling libloading v0.5.2
[INFO] [stderr]    Compiling libz-sys v1.0.25
[INFO] [stderr]    Compiling quote v1.0.3
[INFO] [stderr]    Compiling idna v0.2.0
[INFO] [stderr]    Compiling url v2.1.1
[INFO] [stderr]    Compiling regex v1.3.6
[INFO] [stderr]    Compiling cexpr v0.4.0
[INFO] [stderr]    Compiling serde_derive v1.0.105
[INFO] [stderr]    Compiling snafu-derive v0.6.3
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling snafu v0.6.0
[INFO] [stderr]    Compiling hts-sys v1.10.2
[INFO] [stderr]    Compiling bio-types v0.6.0
[INFO] [stderr]    Compiling bincode v1.2.1
[INFO] [stderr]    Compiling rust-htslib v0.29.0
[INFO] [stderr]    Compiling fmmap v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `std::str::Chars`
[INFO] [stdout]  --> src/main.rs:8:5
[INFO] [stdout]   |
[INFO] [stdout] 8 | use std::str::Chars;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::iter::Rev`
[INFO] [stdout]  --> src/main.rs:9:5
[INFO] [stdout]   |
[INFO] [stdout] 9 | use std::iter::Rev;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Aux`
[INFO] [stdout]   --> src/main.rs:12:45
[INFO] [stdout]    |
[INFO] [stdout] 12 | use rust_htslib::bam::record::{CigarString, Aux, Cigar};
[INFO] [stdout]    |                                             ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::convert::TryFrom`
[INFO] [stdout]   --> src/main.rs:14:5
[INFO] [stdout]    |
[INFO] [stdout] 14 | use std::convert::TryFrom;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `thread`, `time`
[INFO] [stdout]   --> src/main.rs:15:11
[INFO] [stdout]    |
[INFO] [stdout] 15 | use std::{thread, time};
[INFO] [stdout]    |           ^^^^^^  ^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary trailing semicolon
[INFO] [stdout]    --> src/main.rs:356:3
[INFO] [stdout]     |
[INFO] [stdout] 356 |     };
[INFO] [stdout]     |      ^ help: remove this semicolon
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(redundant_semicolons)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:110:7
[INFO] [stdout]     |
[INFO] [stdout] 110 |         let mut c1 = remaining_query.next().unwrap();
[INFO] [stdout]     |             ----^^
[INFO] [stdout]     |             |
[INFO] [stdout]     |             help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `seed_pos`
[INFO] [stdout]    --> src/main.rs:392:7
[INFO] [stdout]     |
[INFO] [stdout] 392 |         let seed_pos = 0;
[INFO] [stdout]     |             ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seed_pos`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:659:6
[INFO] [stdout]     |
[INFO] [stdout] 659 |     let mut sequence = 
[INFO] [stdout]     |         ----^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:665:11
[INFO] [stdout]     |
[INFO] [stdout] 665 |                         let mut sequence = fs::read_to_string(input_file)
[INFO] [stdout]     |                             ----^^^^^^^^
[INFO] [stdout]     |                             |
[INFO] [stdout]     |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:669:11
[INFO] [stdout]     |
[INFO] [stdout] 669 |                         let mut split = sequence.split("\n");
[INFO] [stdout]     |                             ----^^^^^
[INFO] [stdout]     |                             |
[INFO] [stdout]     |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:792:6
[INFO] [stdout]     |
[INFO] [stdout] 792 |     let mut sequence = 
[INFO] [stdout]     |         ----^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:796:9
[INFO] [stdout]     |
[INFO] [stdout] 796 |                 let mut sequence = fs::read_to_string(input_file)
[INFO] [stdout]     |                     ----^^^^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:800:9
[INFO] [stdout]     |
[INFO] [stdout] 800 |                 let mut split = sequence.split("\n");
[INFO] [stdout]     |                     ----^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `name` and `id` are never read
[INFO] [stdout]   --> src/main.rs:62:2
[INFO] [stdout]    |
[INFO] [stdout] 61 | struct GenRead{
[INFO] [stdout]    |        ------- fields in this struct
[INFO] [stdout] 62 |     name: String,
[INFO] [stdout]    |     ^^^^
[INFO] [stdout] 63 |     id : u32,
[INFO] [stdout]    |     ^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `print_2d_vec` is never used
[INFO] [stdout]    --> src/main.rs:193:4
[INFO] [stdout]     |
[INFO] [stdout] 193 | fn print_2d_vec<T : Debug>(matrix : &Vec<Vec<T>>){
[INFO] [stdout]     |    ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `fitting_alignment` is never used
[INFO] [stdout]    --> src/main.rs:203:4
[INFO] [stdout]     |
[INFO] [stdout] 203 | fn fitting_alignment(x : &str, y : &str) -> Vec<Alignment> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `add` is never used
[INFO] [stdout]    --> src/main.rs:450:4
[INFO] [stdout]     |
[INFO] [stdout] 450 | fn add(a : &mut Vec<i32>){
[INFO] [stdout]     |    ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `gold` is never used
[INFO] [stdout]    --> src/main.rs:459:4
[INFO] [stdout]     |
[INFO] [stdout] 459 | fn gold() -> (
[INFO] [stdout]     |    ^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `CIGAR` should have a snake case name
[INFO] [stdout]   --> src/main.rs:70:2
[INFO] [stdout]    |
[INFO] [stdout] 70 |     CIGAR : Vec<Cigar>,
[INFO] [stdout]    |     ^^^^^ help: convert the identifier to snake case: `cigar`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(non_snake_case)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused `Result` that must be used
[INFO] [stdout]    --> src/main.rs:368:2
[INFO] [stdout]     |
[INFO] [stdout] 368 |     file.read_to_end(&mut data);
[INFO] [stdout]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this `Result` may be an `Err` variant, which should be handled
[INFO] [stdout]     = note: `#[warn(unused_must_use)]` on by default
[INFO] [stdout] help: use `let _ = ...` to ignore the resulting value
[INFO] [stdout]     |
[INFO] [stdout] 368 |     let _ = file.read_to_end(&mut data);
[INFO] [stdout]     |     +++++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `gap` should have an upper case name
[INFO] [stdout]    --> src/main.rs:384:8
[INFO] [stdout]     |
[INFO] [stdout] 384 |     const gap : usize = 5;
[INFO] [stdout]     |           ^^^ help: convert the identifier to upper case: `GAP`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(non_upper_case_globals)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `L_col` should have a snake case name
[INFO] [stdout]    --> src/main.rs:711:10
[INFO] [stdout]     |
[INFO] [stdout] 711 |     let mut L_col = Vec::<char>::new();
[INFO] [stdout]     |             ^^^^^ help: convert the identifier to snake case: `l_col`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `F_col` should have a snake case name
[INFO] [stdout]    --> src/main.rs:712:10
[INFO] [stdout]     |
[INFO] [stdout] 712 |     let mut F_col = Vec::<char>::new();
[INFO] [stdout]     |             ^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `F_col_compressed` should have a snake case name
[INFO] [stdout]    --> src/main.rs:752:10
[INFO] [stdout]     |
[INFO] [stdout] 752 |     let mut F_col_compressed = HashMap::<char, usize>::new();
[INFO] [stdout]     |             ^^^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col_compressed`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 25 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 14.60s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: bindgen v0.53.2, nom v5.1.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "f9324e4ae041d2ca006e3958102055d791a7bf67db0cf8d665d4ca8afd621249", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f9324e4ae041d2ca006e3958102055d791a7bf67db0cf8d665d4ca8afd621249", kill_on_drop: false }`
[INFO] [stdout] f9324e4ae041d2ca006e3958102055d791a7bf67db0cf8d665d4ca8afd621249
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-02-10" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 9c1f23d3191d5b5ba12cc041eca4e321e1c9abadb76c423376dae2641de3a904
[INFO] running `Command { std: "docker" "start" "-a" "9c1f23d3191d5b5ba12cc041eca4e321e1c9abadb76c423376dae2641de3a904", kill_on_drop: false }`
[INFO] [stderr]    Compiling fmmap v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `std::str::Chars`
[INFO] [stdout]  --> src/main.rs:8:5
[INFO] [stdout]   |
[INFO] [stdout] 8 | use std::str::Chars;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::iter::Rev`
[INFO] [stdout]  --> src/main.rs:9:5
[INFO] [stdout]   |
[INFO] [stdout] 9 | use std::iter::Rev;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Aux`
[INFO] [stdout]   --> src/main.rs:12:45
[INFO] [stdout]    |
[INFO] [stdout] 12 | use rust_htslib::bam::record::{CigarString, Aux, Cigar};
[INFO] [stdout]    |                                             ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::convert::TryFrom`
[INFO] [stdout]   --> src/main.rs:14:5
[INFO] [stdout]    |
[INFO] [stdout] 14 | use std::convert::TryFrom;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `thread`, `time`
[INFO] [stdout]   --> src/main.rs:15:11
[INFO] [stdout]    |
[INFO] [stdout] 15 | use std::{thread, time};
[INFO] [stdout]    |           ^^^^^^  ^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary trailing semicolon
[INFO] [stdout]    --> src/main.rs:356:3
[INFO] [stdout]     |
[INFO] [stdout] 356 |     };
[INFO] [stdout]     |      ^ help: remove this semicolon
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(redundant_semicolons)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:110:7
[INFO] [stdout]     |
[INFO] [stdout] 110 |         let mut c1 = remaining_query.next().unwrap();
[INFO] [stdout]     |             ----^^
[INFO] [stdout]     |             |
[INFO] [stdout]     |             help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `seed_pos`
[INFO] [stdout]    --> src/main.rs:392:7
[INFO] [stdout]     |
[INFO] [stdout] 392 |         let seed_pos = 0;
[INFO] [stdout]     |             ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seed_pos`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `seqs`
[INFO] [stdout]    --> src/main.rs:516:16
[INFO] [stdout]     |
[INFO] [stdout] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stdout]     |                ^^^^ help: if this is intentional, prefix it with an underscore: `_seqs`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `quals`
[INFO] [stdout]    --> src/main.rs:516:22
[INFO] [stdout]     |
[INFO] [stdout] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stdout]     |                      ^^^^^ help: if this is intentional, prefix it with an underscore: `_quals`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `cigars`
[INFO] [stdout]    --> src/main.rs:516:29
[INFO] [stdout]     |
[INFO] [stdout] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stdout]     |                             ^^^^^^ help: if this is intentional, prefix it with an underscore: `_cigars`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `name`
[INFO] [stdout]    --> src/main.rs:532:17
[INFO] [stdout]     |
[INFO] [stdout] 532 |             for name in names.iter() {
[INFO] [stdout]     |                 ^^^^ help: if this is intentional, prefix it with an underscore: `_name`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `sam`
[INFO] [stdout]    --> src/main.rs:548:13
[INFO] [stdout]     |
[INFO] [stdout] 548 |     let mut sam = Writer::from_path("test123.sam", &header, Format::SAM);
[INFO] [stdout]     |             ^^^ help: if this is intentional, prefix it with an underscore: `_sam`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:548:9
[INFO] [stdout]     |
[INFO] [stdout] 548 |     let mut sam = Writer::from_path("test123.sam", &header, Format::SAM);
[INFO] [stdout]     |         ----^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:659:6
[INFO] [stdout]     |
[INFO] [stdout] 659 |     let mut sequence = 
[INFO] [stdout]     |         ----^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:665:11
[INFO] [stdout]     |
[INFO] [stdout] 665 |                         let mut sequence = fs::read_to_string(input_file)
[INFO] [stdout]     |                             ----^^^^^^^^
[INFO] [stdout]     |                             |
[INFO] [stdout]     |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:669:11
[INFO] [stdout]     |
[INFO] [stdout] 669 |                         let mut split = sequence.split("\n");
[INFO] [stdout]     |                             ----^^^^^
[INFO] [stdout]     |                             |
[INFO] [stdout]     |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:792:6
[INFO] [stdout]     |
[INFO] [stdout] 792 |     let mut sequence = 
[INFO] [stdout]     |         ----^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:796:9
[INFO] [stdout]     |
[INFO] [stdout] 796 |                 let mut sequence = fs::read_to_string(input_file)
[INFO] [stdout]     |                     ----^^^^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:800:9
[INFO] [stdout]     |
[INFO] [stdout] 800 |                 let mut split = sequence.split("\n");
[INFO] [stdout]     |                     ----^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `name` and `id` are never read
[INFO] [stdout]   --> src/main.rs:62:2
[INFO] [stdout]    |
[INFO] [stdout] 61 | struct GenRead{
[INFO] [stdout]    |        ------- fields in this struct
[INFO] [stdout] 62 |     name: String,
[INFO] [stdout]    |     ^^^^
[INFO] [stdout] 63 |     id : u32,
[INFO] [stdout]    |     ^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `print_2d_vec` is never used
[INFO] [stdout]    --> src/main.rs:193:4
[INFO] [stdout]     |
[INFO] [stdout] 193 | fn print_2d_vec<T : Debug>(matrix : &Vec<Vec<T>>){
[INFO] [stdout]     |    ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `fitting_alignment` is never used
[INFO] [stdout]    --> src/main.rs:203:4
[INFO] [stdout]     |
[INFO] [stdout] 203 | fn fitting_alignment(x : &str, y : &str) -> Vec<Alignment> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `CIGAR` should have a snake case name
[INFO] [stdout]   --> src/main.rs:70:2
[INFO] [stdout]    |
[INFO] [stdout] 70 |     CIGAR : Vec<Cigar>,
[INFO] [stdout]    |     ^^^^^ help: convert the identifier to snake case: `cigar`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(non_snake_case)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused `Result` that must be used
[INFO] [stdout]    --> src/main.rs:368:2
[INFO] [stdout]     |
[INFO] [stdout] 368 |     file.read_to_end(&mut data);
[INFO] [stdout]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this `Result` may be an `Err` variant, which should be handled
[INFO] [stdout]     = note: `#[warn(unused_must_use)]` on by default
[INFO] [stdout] help: use `let _ = ...` to ignore the resulting value
[INFO] [stdout]     |
[INFO] [stdout] 368 |     let _ = file.read_to_end(&mut data);
[INFO] [stdout]     |     +++++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `gap` should have an upper case name
[INFO] [stdout]    --> src/main.rs:384:8
[INFO] [stdout]     |
[INFO] [stdout] 384 |     const gap : usize = 5;
[INFO] [stdout]     |           ^^^ help: convert the identifier to upper case: `GAP`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(non_upper_case_globals)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `L_col` should have a snake case name
[INFO] [stdout]    --> src/main.rs:711:10
[INFO] [stdout]     |
[INFO] [stdout] 711 |     let mut L_col = Vec::<char>::new();
[INFO] [stdout]     |             ^^^^^ help: convert the identifier to snake case: `l_col`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `F_col` should have a snake case name
[INFO] [stdout]    --> src/main.rs:712:10
[INFO] [stdout]     |
[INFO] [stdout] 712 |     let mut F_col = Vec::<char>::new();
[INFO] [stdout]     |             ^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `F_col_compressed` should have a snake case name
[INFO] [stdout]    --> src/main.rs:752:10
[INFO] [stdout]     |
[INFO] [stdout] 752 |     let mut F_col_compressed = HashMap::<char, usize>::new();
[INFO] [stdout]     |             ^^^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col_compressed`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 29 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.83s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: bindgen v0.53.2, nom v5.1.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "9c1f23d3191d5b5ba12cc041eca4e321e1c9abadb76c423376dae2641de3a904", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9c1f23d3191d5b5ba12cc041eca4e321e1c9abadb76c423376dae2641de3a904", kill_on_drop: false }`
[INFO] [stdout] 9c1f23d3191d5b5ba12cc041eca4e321e1c9abadb76c423376dae2641de3a904
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-02-10" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 7e608047560e79c9f65a2af0c89c7bff861b51d7adbe4ccdde43a0a313c32a33
[INFO] running `Command { std: "docker" "start" "-a" "7e608047560e79c9f65a2af0c89c7bff861b51d7adbe4ccdde43a0a313c32a33", kill_on_drop: false }`
[INFO] [stderr] warning: unused import: `std::str::Chars`
[INFO] [stderr]  --> src/main.rs:8:5
[INFO] [stderr]   |
[INFO] [stderr] 8 | use std::str::Chars;
[INFO] [stderr]   |     ^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `std::iter::Rev`
[INFO] [stderr]  --> src/main.rs:9:5
[INFO] [stderr]   |
[INFO] [stderr] 9 | use std::iter::Rev;
[INFO] [stderr]   |     ^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `Aux`
[INFO] [stderr]   --> src/main.rs:12:45
[INFO] [stderr]    |
[INFO] [stderr] 12 | use rust_htslib::bam::record::{CigarString, Aux, Cigar};
[INFO] [stderr]    |                                             ^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `std::convert::TryFrom`
[INFO] [stderr]   --> src/main.rs:14:5
[INFO] [stderr]    |
[INFO] [stderr] 14 | use std::convert::TryFrom;
[INFO] [stderr]    |     ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused imports: `thread`, `time`
[INFO] [stderr]   --> src/main.rs:15:11
[INFO] [stderr]    |
[INFO] [stderr] 15 | use std::{thread, time};
[INFO] [stderr]    |           ^^^^^^  ^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unnecessary trailing semicolon
[INFO] [stderr]    --> src/main.rs:356:3
[INFO] [stderr]     |
[INFO] [stderr] 356 |     };
[INFO] [stderr]     |      ^ help: remove this semicolon
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(redundant_semicolons)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:110:7
[INFO] [stderr]     |
[INFO] [stderr] 110 |         let mut c1 = remaining_query.next().unwrap();
[INFO] [stderr]     |             ----^^
[INFO] [stderr]     |             |
[INFO] [stderr]     |             help: remove this `mut`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_mut)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `seed_pos`
[INFO] [stderr]    --> src/main.rs:392:7
[INFO] [stderr]     |
[INFO] [stderr] 392 |         let seed_pos = 0;
[INFO] [stderr]     |             ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seed_pos`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `seqs`
[INFO] [stderr]    --> src/main.rs:516:16
[INFO] [stderr]     |
[INFO] [stderr] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stderr]     |                ^^^^ help: if this is intentional, prefix it with an underscore: `_seqs`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `quals`
[INFO] [stderr]    --> src/main.rs:516:22
[INFO] [stderr]     |
[INFO] [stderr] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stderr]     |                      ^^^^^ help: if this is intentional, prefix it with an underscore: `_quals`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `cigars`
[INFO] [stderr]    --> src/main.rs:516:29
[INFO] [stderr]     |
[INFO] [stderr] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stderr]     |                             ^^^^^^ help: if this is intentional, prefix it with an underscore: `_cigars`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `name`
[INFO] [stderr]    --> src/main.rs:532:17
[INFO] [stderr]     |
[INFO] [stderr] 532 |             for name in names.iter() {
[INFO] [stderr]     |                 ^^^^ help: if this is intentional, prefix it with an underscore: `_name`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `sam`
[INFO] [stderr]    --> src/main.rs:548:13
[INFO] [stderr]     |
[INFO] [stderr] 548 |     let mut sam = Writer::from_path("test123.sam", &header, Format::SAM);
[INFO] [stderr]     |             ^^^ help: if this is intentional, prefix it with an underscore: `_sam`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:548:9
[INFO] [stderr]     |
[INFO] [stderr] 548 |     let mut sam = Writer::from_path("test123.sam", &header, Format::SAM);
[INFO] [stderr]     |         ----^^^
[INFO] [stderr]     |         |
[INFO] [stderr]     |         help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:659:6
[INFO] [stderr]     |
[INFO] [stderr] 659 |     let mut sequence = 
[INFO] [stderr]     |         ----^^^^^^^^
[INFO] [stderr]     |         |
[INFO] [stderr]     |         help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:665:11
[INFO] [stderr]     |
[INFO] [stderr] 665 |                         let mut sequence = fs::read_to_string(input_file)
[INFO] [stderr]     |                             ----^^^^^^^^
[INFO] [stderr]     |                             |
[INFO] [stderr]     |                             help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:669:11
[INFO] [stderr]     |
[INFO] [stderr] 669 |                         let mut split = sequence.split("\n");
[INFO] [stderr]     |                             ----^^^^^
[INFO] [stderr]     |                             |
[INFO] [stderr]     |                             help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:792:6
[INFO] [stderr]     |
[INFO] [stderr] 792 |     let mut sequence = 
[INFO] [stderr]     |         ----^^^^^^^^
[INFO] [stderr]     |         |
[INFO] [stderr]     |         help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:796:9
[INFO] [stderr]     |
[INFO] [stderr] 796 |                 let mut sequence = fs::read_to_string(input_file)
[INFO] [stderr]     |                     ----^^^^^^^^
[INFO] [stderr]     |                     |
[INFO] [stderr]     |                     help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:800:9
[INFO] [stderr]     |
[INFO] [stderr] 800 |                 let mut split = sequence.split("\n");
[INFO] [stderr]     |                     ----^^^^^
[INFO] [stderr]     |                     |
[INFO] [stderr]     |                     help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: fields `name` and `id` are never read
[INFO] [stderr]   --> src/main.rs:62:2
[INFO] [stderr]    |
[INFO] [stderr] 61 | struct GenRead{
[INFO] [stderr]    |        ------- fields in this struct
[INFO] [stderr] 62 |     name: String,
[INFO] [stderr]    |     ^^^^
[INFO] [stderr] 63 |     id : u32,
[INFO] [stderr]    |     ^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: function `print_2d_vec` is never used
[INFO] [stderr]    --> src/main.rs:193:4
[INFO] [stderr]     |
[INFO] [stderr] 193 | fn print_2d_vec<T : Debug>(matrix : &Vec<Vec<T>>){
[INFO] [stderr]     |    ^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: function `fitting_alignment` is never used
[INFO] [stderr]    --> src/main.rs:203:4
[INFO] [stderr]     |
[INFO] [stderr] 203 | fn fitting_alignment(x : &str, y : &str) -> Vec<Alignment> {
[INFO] [stderr]     |    ^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: structure field `CIGAR` should have a snake case name
[INFO] [stderr]   --> src/main.rs:70:2
[INFO] [stderr]    |
[INFO] [stderr] 70 |     CIGAR : Vec<Cigar>,
[INFO] [stderr]    |     ^^^^^ help: convert the identifier to snake case: `cigar`
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(non_snake_case)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused `Result` that must be used
[INFO] [stderr]    --> src/main.rs:368:2
[INFO] [stderr]     |
[INFO] [stderr] 368 |     file.read_to_end(&mut data);
[INFO] [stderr]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: this `Result` may be an `Err` variant, which should be handled
[INFO] [stderr]     = note: `#[warn(unused_must_use)]` on by default
[INFO] [stderr] help: use `let _ = ...` to ignore the resulting value
[INFO] [stderr]     |
[INFO] [stderr] 368 |     let _ = file.read_to_end(&mut data);
[INFO] [stderr]     |     +++++++
[INFO] [stderr] 
[INFO] [stderr] warning: constant `gap` should have an upper case name
[INFO] [stderr]    --> src/main.rs:384:8
[INFO] [stderr]     |
[INFO] [stderr] 384 |     const gap : usize = 5;
[INFO] [stderr]     |           ^^^ help: convert the identifier to upper case: `GAP`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(non_upper_case_globals)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: variable `L_col` should have a snake case name
[INFO] [stderr]    --> src/main.rs:711:10
[INFO] [stderr]     |
[INFO] [stderr] 711 |     let mut L_col = Vec::<char>::new();
[INFO] [stderr]     |             ^^^^^ help: convert the identifier to snake case: `l_col`
[INFO] [stderr] 
[INFO] [stderr] warning: variable `F_col` should have a snake case name
[INFO] [stderr]    --> src/main.rs:712:10
[INFO] [stderr]     |
[INFO] [stderr] 712 |     let mut F_col = Vec::<char>::new();
[INFO] [stderr]     |             ^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col`
[INFO] [stderr] 
[INFO] [stderr] warning: variable `F_col_compressed` should have a snake case name
[INFO] [stderr]    --> src/main.rs:752:10
[INFO] [stderr]     |
[INFO] [stderr] 752 |     let mut F_col_compressed = HashMap::<char, usize>::new();
[INFO] [stderr]     |             ^^^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col_compressed`
[INFO] [stderr] 
[INFO] [stderr] warning: `fmmap` (bin "fmmap" test) generated 29 warnings (run `cargo fix --bin "fmmap" --tests` to apply 19 suggestions)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.06s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: bindgen v0.53.2, nom v5.1.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/fmmap-421d76945e3b1c46)
[INFO] [stdout] 
[INFO] [stdout] running 4 tests
[INFO] [stderr] [E::hts_open_format] Failed to open file "yeet.sam" : Read-only file system
[INFO] [stderr] [E::hts_open_format] Failed to open file "test123.sam" : Read-only file system
[INFO] [stdout] test test_borrow ... ok
[INFO] [stdout] test test_fitting_alignment2 ... ok
[INFO] [stdout] test test_write_sam2 ... ok
[INFO] [stdout] test test_write_sam ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- test_write_sam stdout ----
[INFO] [stdout] thread 'test_write_sam' panicked at src/main.rs:530:14:
[INFO] [stdout] Error opening file.
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x55c1e9c788c6 - std::backtrace_rs::backtrace::libunwind::trace::h140b6deb6a45c671
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/../../backtrace/src/backtrace/libunwind.rs:104:5
[INFO] [stdout]    1:     0x55c1e9c788c6 - std::backtrace_rs::backtrace::trace_unsynchronized::h8450d7e4e9219aed
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stdout]    2:     0x55c1e9c788c6 - std::sys_common::backtrace::_print_fmt::hbd28e5e6c6fc3a3f
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/sys_common/backtrace.rs:68:5
[INFO] [stdout]    3:     0x55c1e9c788c6 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::hb058f285768cf98e
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/sys_common/backtrace.rs:44:22
[INFO] [stdout]    4:     0x55c1e9ca15c0 - core::fmt::rt::Argument::fmt::h87dec7a95127da24
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/fmt/rt.rs:142:9
[INFO] [stdout]    5:     0x55c1e9ca15c0 - core::fmt::write::h873f89a91a4832db
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/fmt/mod.rs:1120:17
[INFO] [stdout]    6:     0x55c1e9c7611f - std::io::Write::write_fmt::h90f651e9e694a4bb
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/io/mod.rs:1846:15
[INFO] [stdout]    7:     0x55c1e9c786a4 - std::sys_common::backtrace::_print::h7719d1529d9a9e13
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/sys_common/backtrace.rs:47:5
[INFO] [stdout]    8:     0x55c1e9c786a4 - std::sys_common::backtrace::print::haa3afbd0e7947108
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/sys_common/backtrace.rs:34:9
[INFO] [stdout]    9:     0x55c1e9c7a417 - std::panicking::default_hook::{{closure}}::h10e3de2ec0eaff22
[INFO] [stdout]   10:     0x55c1e9c7a0fd - std::panicking::default_hook::hbdc1b1b7fe073dab
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:289:9
[INFO] [stdout]   11:     0x55c1e9be2da7 - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::h20f7887d7cd0a330
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/alloc/src/boxed.rs:2029:9
[INFO] [stdout]   12:     0x55c1e9be2da7 - test::test_main::{{closure}}::hc125a615957b5cb1
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/test/src/lib.rs:138:21
[INFO] [stdout]   13:     0x55c1e9c7aa36 - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::h8c19e0590f8443c4
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/alloc/src/boxed.rs:2029:9
[INFO] [stdout]   14:     0x55c1e9c7aa36 - std::panicking::rust_panic_with_hook::hb81692602460473d
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:785:13
[INFO] [stdout]   15:     0x55c1e9c7a782 - std::panicking::begin_panic_handler::{{closure}}::h2470593aa2678e9c
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:659:13
[INFO] [stdout]   16:     0x55c1e9c78dc6 - std::sys_common::backtrace::__rust_end_short_backtrace::h560bb50225b0562b
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/sys_common/backtrace.rs:171:18
[INFO] [stdout]   17:     0x55c1e9c7a4d4 - rust_begin_unwind
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:647:5
[INFO] [stdout]   18:     0x55c1e9ba1d35 - core::panicking::panic_fmt::h29b6f262f6458dc3
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/panicking.rs:72:14
[INFO] [stdout]   19:     0x55c1e9ba1cf3 - core::panicking::panic_display::hdde0dfabb3dc4c78
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/panicking.rs:196:5
[INFO] [stdout]   20:     0x55c1e9ba1cf3 - core::panicking::panic_str::h0898c57a92092d1d
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/panicking.rs:171:5
[INFO] [stdout]   21:     0x55c1e9ba1cf3 - core::option::expect_failed::hc29f105d05e02bac
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/option.rs:1988:5
[INFO] [stdout]   22:     0x55c1e9ba3dc9 - core::option::Option<T>::expect::h3490eda671204715
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/option.rs:894:21
[INFO] [stdout]   23:     0x55c1e9baa08a - fmmap::test_write_sam::hffbe14de169bb9dc
[INFO] [stdout]                                at /opt/rustwide/workdir/src/main.rs:519:27
[INFO] [stdout]   24:     0x55c1e9ba9d67 - fmmap::test_write_sam::{{closure}}::haa207a375dbd6a0c
[INFO] [stdout]                                at /opt/rustwide/workdir/src/main.rs:514:20
[INFO] [stdout]   25:     0x55c1e9bab256 - core::ops::function::FnOnce::call_once::hed907d7ca7584e53
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   26:     0x55c1e9be899f - core::ops::function::FnOnce::call_once::h692fe6f34484199f
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   27:     0x55c1e9be899f - test::__rust_begin_short_backtrace::h48b62e76bd60e2de
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/test/src/lib.rs:621:18
[INFO] [stdout]   28:     0x55c1e9be77c1 - test::run_test_in_process::{{closure}}::h1c68597526ef43db
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/test/src/lib.rs:644:60
[INFO] [stdout]   29:     0x55c1e9be77c1 - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::hcae98092997f976b
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/panic/unwind_safe.rs:272:9
[INFO] [stdout]   30:     0x55c1e9be77c1 - std::panicking::try::do_call::h8d1548c2f5bb535a
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:554:40
[INFO] [stdout]   31:     0x55c1e9be77c1 - std::panicking::try::hbb7a2054f484688e
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:518:19
[INFO] [stdout]   32:     0x55c1e9be77c1 - std::panic::catch_unwind::h696d12d9d80497c2
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panic.rs:142:14
[INFO] [stdout]   33:     0x55c1e9be77c1 - test::run_test_in_process::h053367a7217c825b
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/test/src/lib.rs:644:27
[INFO] [stdout]   34:     0x55c1e9be77c1 - test::run_test::{{closure}}::hfa524e9fabcba78e
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/test/src/lib.rs:567:43
[INFO] [stdout]   35:     0x55c1e9baec26 - test::run_test::{{closure}}::h2c4d0bb741ef7f9f
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/test/src/lib.rs:595:41
[INFO] [stdout]   36:     0x55c1e9baec26 - std::sys_common::backtrace::__rust_begin_short_backtrace::h0d2c708415550075
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/sys_common/backtrace.rs:155:18
[INFO] [stdout]   37:     0x55c1e9bb3be7 - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h76e2635840d7293f
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/thread/mod.rs:529:17
[INFO] [stdout]   38:     0x55c1e9bb3be7 - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::haa640b67a810a214
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/panic/unwind_safe.rs:272:9
[INFO] [stdout]   39:     0x55c1e9bb3be7 - std::panicking::try::do_call::h41892e3bc2807ab5
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:554:40
[INFO] [stdout]   40:     0x55c1e9bb3be7 - std::panicking::try::h861a16d180681c80
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panicking.rs:518:19
[INFO] [stdout]   41:     0x55c1e9bb3be7 - std::panic::catch_unwind::h8195f9064b1509fa
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/panic.rs:142:14
[INFO] [stdout]   42:     0x55c1e9bb3be7 - std::thread::Builder::spawn_unchecked_::{{closure}}::h73cc419da1217371
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/thread/mod.rs:528:30
[INFO] [stdout]   43:     0x55c1e9bb3be7 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h79dc6499ff073b09
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   44:     0x55c1e9c7ee55 - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::ha718e8cdc51a5182
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/alloc/src/boxed.rs:2015:9
[INFO] [stdout]   45:     0x55c1e9c7ee55 - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::h86072abc877c5474
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/alloc/src/boxed.rs:2015:9
[INFO] [stdout]   46:     0x55c1e9c7ee55 - std::sys::pal::unix::thread::Thread::new::thread_start::hac4056197c365894
[INFO] [stdout]                                at /rustc/f2048098a1ca42a520e7bed68e321a66edc0a1b1/library/std/src/sys/pal/unix/thread.rs:108:17
[INFO] [stdout]   47:     0x7ff5143a7ac3 - <unknown>
[INFO] [stdout]   48:     0x7ff514438bf4 - __clone
[INFO] [stdout]   49:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     test_write_sam
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 3 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.03s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--bin fmmap`
[INFO] running `Command { std: "docker" "inspect" "7e608047560e79c9f65a2af0c89c7bff861b51d7adbe4ccdde43a0a313c32a33", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7e608047560e79c9f65a2af0c89c7bff861b51d7adbe4ccdde43a0a313c32a33", kill_on_drop: false }`
[INFO] [stdout] 7e608047560e79c9f65a2af0c89c7bff861b51d7adbe4ccdde43a0a313c32a33
