[INFO] cloning repository https://github.com/informationsea/sequencetoolkit
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/informationsea/sequencetoolkit" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 3a477a1d885c3e86543daefa05ec6e85824e8958
[INFO] testing informationsea/sequencetoolkit against 1.76.0 for beta-1.77-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/informationsea/sequencetoolkit on toolchain 1.76.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.76.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/informationsea/sequencetoolkit
[INFO] finished tweaking git repo https://github.com/informationsea/sequencetoolkit
[INFO] tweaked toml for git repo https://github.com/informationsea/sequencetoolkit written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/informationsea/sequencetoolkit already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.76.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded temp-file v0.1.8
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded bgzip v0.3.1
[INFO] [stderr]   Downloaded xlsxwriter v0.6.0
[INFO] [stderr]   Downloaded bio v1.5.0
[INFO] [stderr]   Downloaded libxlsxwriter-sys v1.1.5
[INFO] [stderr]   Downloaded hts-sys v2.1.1
[INFO] [stderr]   Downloaded rust-htslib v0.44.1
[INFO] [stderr]   Downloaded vcf v0.6.1
[INFO] [stderr]   Downloaded autocompress v0.5.1
[INFO] [stderr]   Downloaded autocompress v0.6.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.76.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 204148b027f3facd3845a725f02691d15234abffd48decc10746f4ec848366bc
[INFO] running `Command { std: "docker" "start" "-a" "204148b027f3facd3845a725f02691d15234abffd48decc10746f4ec848366bc", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "204148b027f3facd3845a725f02691d15234abffd48decc10746f4ec848366bc", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "204148b027f3facd3845a725f02691d15234abffd48decc10746f4ec848366bc", kill_on_drop: false }`
[INFO] [stdout] 204148b027f3facd3845a725f02691d15234abffd48decc10746f4ec848366bc
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.76.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b8fc52566c766687760dfe901c674269b826ec4b136cd1338bc5920fe2adfeff
[INFO] running `Command { std: "docker" "start" "-a" "b8fc52566c766687760dfe901c674269b826ec4b136cd1338bc5920fe2adfeff", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.151
[INFO] [stderr]    Compiling proc-macro2 v1.0.71
[INFO] [stderr]    Compiling unicode-ident v1.0.12
[INFO] [stderr]    Compiling pkg-config v0.3.28
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[INFO] [stderr]    Compiling num-traits v0.2.17
[INFO] [stderr]    Compiling memchr v2.6.4
[INFO] [stderr]    Compiling syn v1.0.109
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[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling rustversion v1.0.14
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[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling flate2 v1.0.28
[INFO] [stderr]    Compiling cmake v0.1.50
[INFO] [stderr]    Compiling regex-automata v0.4.3
[INFO] [stderr]    Compiling openssl-src v300.2.1+3.2.0
[INFO] [stderr]    Compiling matrixmultiply v0.3.8
[INFO] [stderr]    Compiling generic-array v0.14.7
[INFO] [stderr]    Compiling quick-error v1.2.3
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[INFO] [stderr]    Compiling once_cell v1.19.0
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[INFO] [stderr]    Compiling tokio v1.35.1
[INFO] [stderr]    Compiling openssl-sys v0.9.98
[INFO] [stderr]    Compiling libz-sys v1.1.12
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[INFO] [stderr]    Compiling regex v1.10.2
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[INFO] [stderr]    Compiling rand_chacha v0.3.1
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[INFO] [stderr]    Compiling thiserror-impl v1.0.51
[INFO] [stderr]    Compiling serde_derive v1.0.193
[INFO] [stderr]    Compiling clang-sys v1.6.1
[INFO] [stderr]    Compiling num-rational v0.4.1
[INFO] [stderr]    Compiling ryu v1.0.16
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling rustix v0.38.28
[INFO] [stderr]    Compiling prettyplease v0.2.15
[INFO] [stderr]    Compiling clap_lex v0.6.0
[INFO] [stderr]    Compiling clap_builder v4.4.11
[INFO] [stderr]    Compiling strum_macros v0.25.3
[INFO] [stderr]    Compiling clap_derive v4.4.7
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling bgzip v0.3.1
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[INFO] [stderr]    Compiling bitflags v2.4.1
[INFO] [stderr]    Compiling linux-raw-sys v0.4.12
[INFO] [stderr]    Compiling feature-probe v0.1.1
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[INFO] [stderr]    Compiling simba v0.6.0
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling clap v4.4.11
[INFO] [stderr]    Compiling bio-types v1.0.1
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling curl-sys v0.4.70+curl-8.5.0
[INFO] [stderr]    Compiling libloading v0.7.4
[INFO] [stderr]    Compiling bindgen v0.65.1
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling tinyvec_macros v0.1.1
[INFO] [stderr]    Compiling equivalent v1.0.1
[INFO] [stderr]    Compiling itoa v1.0.10
[INFO] [stderr]    Compiling home v0.5.9
[INFO] [stderr]    Compiling hashbrown v0.14.3
[INFO] [stderr]    Compiling tinyvec v1.6.0
[INFO] [stderr]    Compiling which v4.4.2
[INFO] [stderr]    Compiling indexmap v2.1.0
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling block-buffer v0.10.4
[INFO] [stderr]    Compiling crypto-common v0.1.6
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling nalgebra v0.29.0
[INFO] [stderr]    Compiling csv-core v0.1.11
[INFO] [stderr]    Compiling log v0.4.20
[INFO] [stderr]    Compiling getrandom v0.1.16
[INFO] [stderr]    Compiling fixedbitset v0.4.2
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling shlex v1.2.0
[INFO] [stderr]    Compiling bit-vec v0.6.3
[INFO] [stderr]    Compiling petgraph v0.6.4
[INFO] [stderr]    Compiling csv v1.3.0
[INFO] [stderr]    Compiling bit-set v0.5.3
[INFO] [stderr]    Compiling enum-map v2.7.3
[INFO] [stderr]    Compiling hts-sys v2.1.1
[INFO] [stderr]    Compiling getset v0.1.2
[INFO] [stderr]    Compiling digest v0.10.7
[INFO] [stderr]    Compiling unicode-normalization v0.1.22
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling multimap v0.9.1
[INFO] [stderr]    Compiling ndarray v0.15.6
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]    Compiling itertools v0.11.0
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v3.9.2
[INFO] [stderr]    Compiling bytecount v0.6.7
[INFO] [stderr]    Compiling unicode-bidi v0.3.14
[INFO] [stderr]    Compiling triple_accel v0.4.0
[INFO] [stderr]    Compiling lexical-core v0.7.6
[INFO] [stderr]    Compiling percent-encoding v2.3.1
[INFO] [stderr]    Compiling editdistancek v1.0.2
[INFO] [stderr]    Compiling strum v0.25.0
[INFO] [stderr]    Compiling form_urlencoded v1.2.1
[INFO] [stderr]    Compiling idna v0.5.0
[INFO] [stderr]    Compiling backtrace v0.3.69
[INFO] [stderr]    Compiling nom v5.1.3
[INFO] [stderr]    Compiling gimli v0.28.1
[INFO] [stderr]    Compiling static_assertions v1.1.0
[INFO] [stderr]    Compiling failure_derive v0.1.8
[INFO] [stderr]    Compiling arrayvec v0.5.2
[INFO] [stderr]    Compiling unicode-xid v0.2.4
[INFO] [stderr]    Compiling synstructure v0.12.6
[INFO] [stderr]    Compiling url v2.5.0
[INFO] [stderr]    Compiling rand_core v0.5.1
[INFO] [stderr]    Compiling libxlsxwriter-sys v1.1.5
[INFO] [stderr]    Compiling object v0.32.2
[INFO] [stderr]    Compiling cpufeatures v0.2.11
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling addr2line v0.21.0
[INFO] [stderr]    Compiling serde_json v1.0.108
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling rustc-demangle v0.1.23
[INFO] [stderr]    Compiling iana-time-zone v0.1.58
[INFO] [stderr]    Compiling chrono v0.4.31
[INFO] [stderr]    Compiling vcf v0.6.1
[INFO] [stderr]    Compiling statrs v0.16.0
[INFO] [stderr]    Compiling bio v1.5.0
[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling md-5 v0.10.6
[INFO] [stderr]    Compiling rmp v0.8.12
[INFO] [stderr]    Compiling humantime v1.3.0
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling termcolor v1.4.0
[INFO] [stderr]    Compiling rmp-serde v1.1.2
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling env_logger v0.7.1
[INFO] [stderr]    Compiling failure v0.1.8
[INFO] [stderr]    Compiling sha1 v0.10.6
[INFO] [stderr]    Compiling sha2 v0.10.8
[INFO] [stderr]    Compiling bincode v1.3.3
[INFO] [stderr]    Compiling itertools v0.9.0
[INFO] [stderr]    Compiling crossbeam-channel v0.5.10
[INFO] [stderr]    Compiling itoa v0.4.8
[INFO] [stderr]    Compiling sequencetoolkit v0.4.2 (/opt/rustwide/workdir/sequencetoolkit)
[INFO] [stderr]    Compiling temp-file v0.1.8
[INFO] [stderr]    Compiling pretty_env_logger v0.4.0
[INFO] [stderr]    Compiling bzip2 v0.4.4
[INFO] [stderr]    Compiling zstd v0.13.0
[INFO] [stderr]    Compiling xlsxwriter v0.6.0
[INFO] [stderr]    Compiling xz2 v0.1.7
[INFO] [stderr]    Compiling autocompress v0.6.0
[INFO] [stderr]    Compiling autocompress v0.5.1
[INFO] [stderr]    Compiling fsutils v0.1.0 (/opt/rustwide/workdir/fsutils)
[INFO] [stderr]    Compiling bedutils v0.1.0 (/opt/rustwide/workdir/bedutils)
[INFO] [stderr]    Compiling geneannot v0.1.0 (/opt/rustwide/workdir/geneannot)
[INFO] [stderr]    Compiling fastqutils v0.1.0 (/opt/rustwide/workdir/fastqutils)
[INFO] [stderr]    Compiling vcfutils v0.1.0 (/opt/rustwide/workdir/vcfutils)
[INFO] [stderr]    Compiling rust-htslib v0.44.1
[INFO] [stderr]    Compiling bam2fastq v0.1.0 (/opt/rustwide/workdir/bam2fastq)
[INFO] [stderr]    Compiling bamutils v0.1.0 (/opt/rustwide/workdir/bamutils)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 2m 35s
[INFO] running `Command { std: "docker" "inspect" "b8fc52566c766687760dfe901c674269b826ec4b136cd1338bc5920fe2adfeff", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b8fc52566c766687760dfe901c674269b826ec4b136cd1338bc5920fe2adfeff", kill_on_drop: false }`
[INFO] [stdout] b8fc52566c766687760dfe901c674269b826ec4b136cd1338bc5920fe2adfeff
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.76.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 0c344b78494aae16bfc42e97ddc4c639610a542998c04de7dcd9846adf0e1d33
[INFO] running `Command { std: "docker" "start" "-a" "0c344b78494aae16bfc42e97ddc4c639610a542998c04de7dcd9846adf0e1d33", kill_on_drop: false }`
[INFO] [stderr]    Compiling bam2fastq v0.1.0 (/opt/rustwide/workdir/bam2fastq)
[INFO] [stderr]    Compiling bedutils v0.1.0 (/opt/rustwide/workdir/bedutils)
[INFO] [stderr]    Compiling vcfutils v0.1.0 (/opt/rustwide/workdir/vcfutils)
[INFO] [stderr]    Compiling geneannot v0.1.0 (/opt/rustwide/workdir/geneannot)
[INFO] [stderr]    Compiling fsutils v0.1.0 (/opt/rustwide/workdir/fsutils)
[INFO] [stderr]    Compiling sequencetoolkit v0.4.2 (/opt/rustwide/workdir/sequencetoolkit)
[INFO] [stderr]    Compiling bamutils v0.1.0 (/opt/rustwide/workdir/bamutils)
[INFO] [stderr]    Compiling fastqutils v0.1.0 (/opt/rustwide/workdir/fastqutils)
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note: LC_ALL="C" PATH="/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/bin:/opt/rustwide/cargo-home/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin" VSLANG="1033" "cc" "-m64" "/tmp/rustc3SByG1/symbols.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.00.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.01.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.02.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.03.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.04.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.05.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.06.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.07.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.08.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.09.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.10.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.11.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.12.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.13.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.14.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.bamutils.f4505474e5a8a090-cgu.15.rcgu.o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274.wnno517nruc6ncs.rcgu.o" "-Wl,--as-needed" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-b2c745f052e2081d/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-ee8db91219d95387/out" "-L" "/opt/rustwide/target/debug/build/zstd-sys-b3999e24cae5c2cd/out" "-L" "/opt/rustwide/target/debug/build/hts-sys-dbddc8102181e3ec/out" "-L" "/opt/rustwide/target/debug/build/curl-sys-8ff0f7dd4b594e30/out/build" "-L" "/opt/rustwide/target/debug/build/libz-sys-227528f1221ccca5/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-227528f1221ccca5/out/lib64" "-L" "/opt/rustwide/target/debug/build/openssl-sys-280f7dfc0b8f7882/out/openssl-build/install/lib" "-L" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libtest-5d722ce3e5d0595e.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgetopts-76f5006e4e062e57.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunicode_width-a18ed5fdf4a57b72.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_std-a14b8d31733ef9e9.rlib" "/opt/rustwide/target/debug/deps/libbio-5cf871ac0deeee34.rlib" "/opt/rustwide/target/debug/deps/libstrum-508ba097b61aacc8.rlib" "/opt/rustwide/target/debug/deps/libcsv-4ef3d2f2cec75a48.rlib" "/opt/rustwide/target/debug/deps/libryu-e44ebf67d9e1b5dc.rlib" "/opt/rustwide/target/debug/deps/libitoa-6976aa51a2dfe178.rlib" "/opt/rustwide/target/debug/deps/libcsv_core-294e5418ddeb6efb.rlib" "/opt/rustwide/target/debug/deps/libbytecount-d2293dafe65774c5.rlib" "/opt/rustwide/target/debug/deps/libtriple_accel-cb7eb06465824dd3.rlib" "/opt/rustwide/target/debug/deps/libeditdistancek-3f6793b4735d03f0.rlib" "/opt/rustwide/target/debug/deps/libitertools_num-c68c81828991a3b7.rlib" "/opt/rustwide/target/debug/deps/libenum_map-66edc0a191a25ceb.rlib" "/opt/rustwide/target/debug/deps/libstatrs-9bfa7cb80ec61322.rlib" "/opt/rustwide/target/debug/deps/libnalgebra-242016db3dafccc1.rlib" "/opt/rustwide/target/debug/deps/librand_distr-db66093c5b83d251.rlib" "/opt/rustwide/target/debug/deps/libnum_rational-618a21e49241d26f.rlib" "/opt/rustwide/target/debug/deps/libtypenum-14f7ea860db0865a.rlib" "/opt/rustwide/target/debug/deps/libsimba-ddca959a6ca78d78.rlib" "/opt/rustwide/target/debug/deps/libwide-39887421ade503cc.rlib" "/opt/rustwide/target/debug/deps/libsafe_arch-38ff250ff5481313.rlib" "/opt/rustwide/target/debug/deps/libbytemuck-d3d621d16d225fa6.rlib" "/opt/rustwide/target/debug/deps/libordered_float-5263eff2e449b966.rlib" "/opt/rustwide/target/debug/deps/libndarray-88897586cd4da22f.rlib" "/opt/rustwide/target/debug/deps/libmatrixmultiply-c1315b7ae596f0ff.rlib" "/opt/rustwide/target/debug/deps/libnum_complex-0e168dfc503e2b71.rlib" "/opt/rustwide/target/debug/deps/librawpointer-5d348aa0cccecda3.rlib" "/opt/rustwide/target/debug/deps/libmultimap-51cba074001922ce.rlib" "/opt/rustwide/target/debug/deps/libitertools-f41d5484ab21a47b.rlib" "/opt/rustwide/target/debug/deps/libanyhow-79152dd8fba25995.rlib" "/opt/rustwide/target/debug/deps/libnum_integer-af321ee13878256a.rlib" "/opt/rustwide/target/debug/deps/libbv-a09608cff4a1c518.rlib" "/opt/rustwide/target/debug/deps/libvec_map-4c19f230d63f12bd.rlib" "/opt/rustwide/target/debug/deps/libserde-d7f2ad7a3dcdad1a.rlib" "/opt/rustwide/target/debug/deps/libbit_set-f7d2bf37cc06865b.rlib" "/opt/rustwide/target/debug/deps/libbit_vec-51af7e270c17e705.rlib" "/opt/rustwide/target/debug/deps/libfxhash-cde54061635bed1a.rlib" "/opt/rustwide/target/debug/deps/libpetgraph-a619d76e458f0b1d.rlib" "/opt/rustwide/target/debug/deps/libindexmap-b6ed0d5535814d6d.rlib" "/opt/rustwide/target/debug/deps/libequivalent-d4ba86fbe25ccfe9.rlib" "/opt/rustwide/target/debug/deps/libhashbrown-cd697adf09417a41.rlib" "/opt/rustwide/target/debug/deps/libfixedbitset-e5316dd218690b3f.rlib" "/opt/rustwide/target/debug/deps/libapprox-26cfd25da042379c.rlib" "/opt/rustwide/target/debug/deps/libnum_traits-4906274a55d0f2b2.rlib" "/opt/rustwide/target/debug/deps/libautocompress-63313eebb8263320.rlib" "/opt/rustwide/target/debug/deps/libbzip2-f9a3a31c6a666229.rlib" "/opt/rustwide/target/debug/deps/libbgzip-c15078cd95aa2ed1.rlib" "/opt/rustwide/target/debug/deps/libflate2-66eb97d192bebf64.rlib" "/opt/rustwide/target/debug/deps/libminiz_oxide-674fa96f13923731.rlib" "/opt/rustwide/target/debug/deps/libadler-a0cd1d9d3187563c.rlib" "/opt/rustwide/target/debug/deps/libcrc32fast-29c38368e0d9b46f.rlib" "/opt/rustwide/target/debug/deps/librayon-17908095fe1cc682.rlib" "/opt/rustwide/target/debug/deps/librayon_core-0802e691f9017a50.rlib" "/opt/rustwide/target/debug/deps/libcrossbeam_deque-bf9c4bc061a9bace.rlib" "/opt/rustwide/target/debug/deps/libcrossbeam_epoch-1513adba5f520e6d.rlib" "/opt/rustwide/target/debug/deps/libcrossbeam_utils-58d10426aba53d20.rlib" "/opt/rustwide/target/debug/deps/libeither-855b9314fb261e0d.rlib" "/opt/rustwide/target/debug/deps/libzstd-11865ae2bfe2d457.rlib" "/opt/rustwide/target/debug/deps/libzstd_safe-77c781708cbbd1c9.rlib" "/opt/rustwide/target/debug/deps/libzstd_sys-d1a92dc5ef0cc191.rlib" "/opt/rustwide/target/debug/deps/libxz2-44d9d66662ec4e0e.rlib" "/opt/rustwide/target/debug/deps/libtokio-e56edeccef365c3a.rlib" "/opt/rustwide/target/debug/deps/libbytes-ed3aeb66deaa63ba.rlib" "/opt/rustwide/target/debug/deps/libpin_project_lite-78bdbfb86705d97e.rlib" "/opt/rustwide/target/debug/deps/librand-03894ca2a9cb3c58.rlib" "/opt/rustwide/target/debug/deps/librand_chacha-b422dfdefafad176.rlib" "/opt/rustwide/target/debug/deps/libppv_lite86-75d3a003153bde67.rlib" "/opt/rustwide/target/debug/deps/librand_core-6f3732d52301dfcb.rlib" "/opt/rustwide/target/debug/deps/libgetrandom-7998901055423d8f.rlib" "/opt/rustwide/target/debug/deps/libcfg_if-a4e1ca4231ab3b1f.rlib" "/opt/rustwide/target/debug/deps/librust_htslib-2e1555b9d8e90d1b.rlib" "/opt/rustwide/target/debug/deps/libieee754-853c7d22a0f42595.rlib" "/opt/rustwide/target/debug/deps/libhts_sys-2b21f1b022ce9891.rlib" "/opt/rustwide/target/debug/deps/liblzma_sys-eec6629ee4eb99c3.rlib" "/opt/rustwide/target/debug/deps/libcurl_sys-faaa6cbdddfd08da.rlib" "/opt/rustwide/target/debug/deps/libopenssl_sys-64a68c8ee703b441.rlib" "/opt/rustwide/target/debug/deps/liblibz_sys-c2632435094630d9.rlib" "/opt/rustwide/target/debug/deps/libbzip2_sys-af2215d471d312a2.rlib" "/opt/rustwide/target/debug/deps/liblibc-4daa4edee9430ee7.rlib" "/opt/rustwide/target/debug/deps/liburl-98c049f0d7fccc18.rlib" "/opt/rustwide/target/debug/deps/libidna-f33819caff20ffae.rlib" "/opt/rustwide/target/debug/deps/libunicode_normalization-532f6ecbf607242d.rlib" "/opt/rustwide/target/debug/deps/libtinyvec-86233ffb6e68f55f.rlib" "/opt/rustwide/target/debug/deps/libtinyvec_macros-1f837015341fdbf7.rlib" "/opt/rustwide/target/debug/deps/libunicode_bidi-4946e3067124c867.rlib" "/opt/rustwide/target/debug/deps/libform_urlencoded-c4c03fefce78c394.rlib" "/opt/rustwide/target/debug/deps/libpercent_encoding-a434dbd6df2699c7.rlib" "/opt/rustwide/target/debug/deps/libbio_types-145737db120b3bed.rlib" "/opt/rustwide/target/debug/deps/libthiserror-08a344247f3f6fc4.rlib" "/opt/rustwide/target/debug/deps/libbyteorder-34348d75f49273e9.rlib" "/opt/rustwide/target/debug/deps/liblinear_map-9baab41ef9fd006a.rlib" "/opt/rustwide/target/debug/deps/liblazy_static-67076bd63a6ff427.rlib" "/opt/rustwide/target/debug/deps/libnewtype_derive-d2f43ae52e4387a4.rlib" "/opt/rustwide/target/debug/deps/libcustom_derive-b6d3e73f0c7f545d.rlib" "/opt/rustwide/target/debug/deps/libregex-032d21f8cabf573f.rlib" "/opt/rustwide/target/debug/deps/libregex_automata-170a9d073fdc3a22.rlib" "/opt/rustwide/target/debug/deps/libaho_corasick-177caf1c55a5dcb4.rlib" "/opt/rustwide/target/debug/deps/libmemchr-3d56a74a21b1ff72.rlib" "/opt/rustwide/target/debug/deps/libregex_syntax-0d266e3910baead0.rlib" "/opt/rustwide/target/debug/deps/libonce_cell-a5f155bc652541d7.rlib" "/opt/rustwide/target/debug/deps/libclap-72e876f21119b2d4.rlib" "/opt/rustwide/target/debug/deps/libclap_builder-541e79496a2fd255.rlib" "/opt/rustwide/target/debug/deps/libstrsim-1ad18ae4be08849d.rlib" "/opt/rustwide/target/debug/deps/libanstream-cf12d81f5c8b34a2.rlib" "/opt/rustwide/target/debug/deps/libanstyle_query-b28fd6e5bd656721.rlib" "/opt/rustwide/target/debug/deps/libcolorchoice-525cf41a1ca8289f.rlib" "/opt/rustwide/target/debug/deps/libanstyle_parse-737e575968f90d0c.rlib" "/opt/rustwide/target/debug/deps/libutf8parse-1aeec2d3cac7ef6b.rlib" "/opt/rustwide/target/debug/deps/libclap_lex-9bc62322a1e4c998.rlib" "/opt/rustwide/target/debug/deps/libanstyle-a8da1adc15bde755.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-66d8041607d2929b.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-a57e2388c0aea9b1.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-dcd9be90ae2cb505.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libmemchr-516789932d161b4e.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-1ff34b0cf871cb60.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-0c110dd0650d6cb7.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-a6e97aae2681ad8f.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd_detect-b93dac2525ec4d1e.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-ce1d65fb391ae98b.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-8933a2fb54d88492.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-306712ebb1ee1a3f.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-349c574f342b0d30.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-65c422a3ad95273d.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-7e6330a6c0cb9441.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-39c59240bfdfab27.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-e9d126c51bb8b2bb.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-5af394d9b1f07bdc.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-693a8f23970c5917.rlib" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-13fc9d1ed9c7a2bc.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/rustup-home/toolchains/1.76.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/bamutils-7eefd3eb738d9274" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: collect2: fatal error: ld terminated with signal 9 [Killed]
[INFO] [stdout]           compilation terminated.
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 1 previous error
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `bamutils` (lib test) due to 2 previous errors
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "0c344b78494aae16bfc42e97ddc4c639610a542998c04de7dcd9846adf0e1d33", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0c344b78494aae16bfc42e97ddc4c639610a542998c04de7dcd9846adf0e1d33", kill_on_drop: false }`
[INFO] [stdout] 0c344b78494aae16bfc42e97ddc4c639610a542998c04de7dcd9846adf0e1d33
