[INFO] fetching crate exon 0.5.3...
[INFO] documenting exon-0.5.3 against 1.75.0 for beta-1.76-rustdoc-1
[INFO] extracting crate exon 0.5.3 into /workspace/builds/worker-6-tc1/source
[INFO] validating manifest of crates.io crate exon 0.5.3 on toolchain 1.75.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate exon 0.5.3
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate exon 0.5.3
[INFO] tweaked toml for crates.io crate exon 0.5.3 written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] b6c75f7f1e8f10ae95d21ec37c91073930aa1dad5dae7368e88c7b2f233737ad
[INFO] running `Command { std: "docker" "start" "-a" "b6c75f7f1e8f10ae95d21ec37c91073930aa1dad5dae7368e88c7b2f233737ad", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b6c75f7f1e8f10ae95d21ec37c91073930aa1dad5dae7368e88c7b2f233737ad", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b6c75f7f1e8f10ae95d21ec37c91073930aa1dad5dae7368e88c7b2f233737ad", kill_on_drop: false }`
[INFO] [stdout] b6c75f7f1e8f10ae95d21ec37c91073930aa1dad5dae7368e88c7b2f233737ad
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 208bc6e80666aec54562cf5b9ca0959ad858f9bd6482d20f4682370465f6bd47
[INFO] running `Command { std: "docker" "start" "-a" "208bc6e80666aec54562cf5b9ca0959ad858f9bd6482d20f4682370465f6bd47", kill_on_drop: false }`
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[INFO] [stderr]     Checking noodles v0.59.0
[INFO] [stderr]     Checking arrow-select v48.0.1
[INFO] [stderr]     Checking arrow-arith v48.0.1
[INFO] [stderr]     Checking arrow-row v48.0.1
[INFO] [stderr]     Checking arrow-cast v49.0.0
[INFO] [stderr]     Checking arrow-string v49.0.0
[INFO] [stderr]     Checking arrow-ord v49.0.0
[INFO] [stderr]     Checking arrow-cast v48.0.1
[INFO] [stderr]     Checking arrow-string v48.0.1
[INFO] [stderr]     Checking arrow-ord v48.0.1
[INFO] [stderr]     Checking zstd v0.13.0
[INFO] [stderr]     Checking arrow-ipc v49.0.0
[INFO] [stderr]     Checking arrow-json v49.0.0
[INFO] [stderr]     Checking arrow-csv v49.0.0
[INFO] [stderr]     Checking async-compression v0.4.5
[INFO] [stderr]     Checking arrow-ipc v48.0.1
[INFO] [stderr]     Checking arrow-csv v48.0.1
[INFO] [stderr]     Checking arrow-json v48.0.1
[INFO] [stderr]     Checking tokio-rustls v0.24.1
[INFO] [stderr]     Checking hyper-rustls v0.24.2
[INFO] [stderr]     Checking reqwest v0.11.23
[INFO] [stderr]     Checking arrow v49.0.0
[INFO] [stderr]     Checking aws-smithy-runtime v1.1.1
[INFO] [stderr]     Checking arrow v48.0.1
[INFO] [stderr]     Checking object_store v0.8.0
[INFO] [stderr]     Checking object_store v0.7.1
[INFO] [stderr]     Checking aws-sdk-ssooidc v1.9.0
[INFO] [stderr]     Checking aws-sdk-sso v1.9.0
[INFO] [stderr]     Checking aws-sdk-sts v1.9.0
[INFO] [stderr]     Checking aws-config v1.1.1
[INFO] [stderr]     Checking parquet v49.0.0
[INFO] [stderr]     Checking parquet v48.0.1
[INFO] [stderr]     Checking exon-io v0.5.5
[INFO] [stderr]     Checking datafusion-common v34.0.0
[INFO] [stderr]     Checking datafusion-common v33.0.0
[INFO] [stderr]     Checking datafusion-expr v34.0.0
[INFO] [stderr]     Checking datafusion-expr v33.0.0
[INFO] [stderr]     Checking datafusion-physical-expr v34.0.0
[INFO] [stderr]     Checking datafusion-execution v34.0.0
[INFO] [stderr]     Checking datafusion-sql v34.0.0
[INFO] [stderr]     Checking datafusion-physical-expr v33.0.0
[INFO] [stderr]     Checking datafusion-execution v33.0.0
[INFO] [stderr]     Checking datafusion-sql v33.0.0
[INFO] [stderr]     Checking datafusion-physical-plan v34.0.0
[INFO] [stderr]     Checking datafusion-optimizer v34.0.0
[INFO] [stderr]     Checking datafusion-physical-plan v33.0.0
[INFO] [stderr]     Checking datafusion-optimizer v33.0.0
[INFO] [stderr]     Checking datafusion v34.0.0
[INFO] [stderr]     Checking datafusion v33.0.0
[INFO] [stderr]     Checking exon-common v0.5.5
[INFO] [stderr]     Checking exon-fasta v0.5.5
[INFO] [stderr]     Checking exon-bam v0.5.5
[INFO] [stderr]     Checking exon-fastq v0.5.5
[INFO] [stderr]     Checking exon-bed v0.5.5
[INFO] [stderr]     Checking exon-gff v0.5.5
[INFO] [stderr]     Checking exon-gtf v0.5.5
[INFO] [stderr]  Documenting exon v0.5.3 (/opt/rustwide/workdir)
[INFO] [stdout] error[E0433]: failed to resolve: could not find `bam` in `noodles`
[INFO] [stdout]   --> src/datasources/bam/table_provider.rs:33:15
[INFO] [stdout]    |
[INFO] [stdout] 33 | use noodles::{bam::lazy::Record, core::Region};
[INFO] [stdout]    |               ^^^ could not find `bam` in `noodles`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: failed to resolve: could not find `sam` in `noodles`
[INFO] [stdout]   --> src/datasources/sam/array_builder.rs:24:14
[INFO] [stdout]    |
[INFO] [stdout] 24 | use noodles::sam::record::{
[INFO] [stdout]    |              ^^^ could not find `sam` in `noodles`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: failed to resolve: could not find `sam` in `noodles`
[INFO] [stdout]   --> src/datasources/sam/array_builder.rs:28:14
[INFO] [stdout]    |
[INFO] [stdout] 28 | use noodles::sam::{alignment::Record, Header};
[INFO] [stdout]    |              ^^^ could not find `sam` in `noodles`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: failed to resolve: could not find `sam` in `noodles`
[INFO] [stdout]   --> src/udfs/samflags/mod.rs:25:14
[INFO] [stdout]    |
[INFO] [stdout] 25 | use noodles::sam::record::Flags;
[INFO] [stdout]    |              ^^^ could not find `sam` in `noodles`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0432]: unresolved import `noodles::sam`
[INFO] [stdout]   --> src/datasources/sam/array_builder.rs:28:14
[INFO] [stdout]    |
[INFO] [stdout] 28 | use noodles::sam::{alignment::Record, Header};
[INFO] [stdout]    |              ^^^ could not find `sam` in `noodles`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: failed to resolve: could not find `sam` in `noodles`
[INFO] [stdout]   --> src/datasources/sam/batch_reader.rs:30:22
[INFO] [stdout]    |
[INFO] [stdout] 30 |     reader: noodles::sam::AsyncReader<R>,
[INFO] [stdout]    |                      ^^^ could not find `sam` in `noodles`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: failed to resolve: could not find `sam` in `noodles`
[INFO] [stdout]   --> src/datasources/sam/batch_reader.rs:36:22
[INFO] [stdout]    |
[INFO] [stdout] 36 |     header: noodles::sam::Header,
[INFO] [stdout]    |                      ^^^ could not find `sam` in `noodles`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: failed to resolve: could not find `sam` in `noodles`
[INFO] [stdout]   --> src/datasources/sam/batch_reader.rs:65:72
[INFO] [stdout]    |
[INFO] [stdout] 65 |     async fn read_record(&mut self) -> std::io::Result<Option<noodles::sam::alignment::Record>> {
[INFO] [stdout]    |                                                                        ^^^ could not find `sam` in `noodles`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0053]: method `finish` has an incompatible type for trait
[INFO] [stdout]    --> src/datasources/vcf/array_builder/lazy_array_builder.rs:325:5
[INFO] [stdout]     |
[INFO] [stdout] 325 |     fn finish(&mut self) -> Vec<ArrayRef> {
[INFO] [stdout]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ expected trait `arrow_array::array::Array`, found trait `arrow::array::Array`
[INFO] [stdout]     |
[INFO] [stdout]     = note: expected signature `fn(&mut datasources::vcf::array_builder::lazy_array_builder::LazyVCFArrayBuilder) -> std::vec::Vec<std::sync::Arc<(dyn arrow_array::array::Array + 'static)>>`
[INFO] [stdout]                found signature `fn(&mut datasources::vcf::array_builder::lazy_array_builder::LazyVCFArrayBuilder) -> std::vec::Vec<std::sync::Arc<(dyn arrow::array::Array + 'static)>>`
[INFO] [stdout]     = note: perhaps two different versions of crate `arrow_array` are being used?
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 9 previous errors
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] Some errors have detailed explanations: E0053, E0432, E0433.
[INFO] [stdout] 
[INFO] [stdout] For more information about an error, try `rustc --explain E0053`.
[INFO] [stdout] 
[INFO] [stderr] error: could not document `exon`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/1.75.0-x86_64-unknown-linux-gnu/bin/rustdoc --edition=2021 --crate-type lib --crate-name exon src/lib.rs -o /opt/rustwide/target/doc --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --document-private-items -C metadata=6b408bfa8aa923d7 -L dependency=/opt/rustwide/target/debug/deps --extern arrow=/opt/rustwide/target/debug/deps/libarrow-26257df35095bfb8.rmeta --extern async_trait=/opt/rustwide/target/debug/deps/libasync_trait-702e4cf5eb80aa86.so --extern bytes=/opt/rustwide/target/debug/deps/libbytes-19782e77171d7466.rmeta --extern datafusion=/opt/rustwide/target/debug/deps/libdatafusion-a4077207b51125e1.rmeta --extern exon_bam=/opt/rustwide/target/debug/deps/libexon_bam-25fc4d019f6035f9.rmeta --extern exon_bed=/opt/rustwide/target/debug/deps/libexon_bed-9d7903875e355c93.rmeta --extern exon_common=/opt/rustwide/target/debug/deps/libexon_common-7ffc3aa5f81f0016.rmeta --extern exon_fasta=/opt/rustwide/target/debug/deps/libexon_fasta-83fff1bdc3d7ffbb.rmeta --extern exon_fastq=/opt/rustwide/target/debug/deps/libexon_fastq-80dafffe0448fa84.rmeta --extern exon_gff=/opt/rustwide/target/debug/deps/libexon_gff-ac3b5ac8363448e6.rmeta --extern exon_gtf=/opt/rustwide/target/debug/deps/libexon_gtf-28e0a0cb707f7615.rmeta --extern exon_io=/opt/rustwide/target/debug/deps/libexon_io-e85773525c153037.rmeta --extern futures=/opt/rustwide/target/debug/deps/libfutures-c2c237b7737f7612.rmeta --extern itertools=/opt/rustwide/target/debug/deps/libitertools-718e62fb194a164b.rmeta --extern noodles=/opt/rustwide/target/debug/deps/libnoodles-fd4353ed3aca6902.rmeta --extern noodles_bgzf=/opt/rustwide/target/debug/deps/libnoodles_bgzf-e58ddea5e2875b62.rmeta --extern num_cpus=/opt/rustwide/target/debug/deps/libnum_cpus-56644faccfdfe357.rmeta --extern object_store=/opt/rustwide/target/debug/deps/libobject_store-052e9673c36261f7.rmeta --extern tokio=/opt/rustwide/target/debug/deps/libtokio-b2ab356793e545c9.rmeta --extern tokio_util=/opt/rustwide/target/debug/deps/libtokio_util-47002f5f5a0a25de.rmeta --extern tracing=/opt/rustwide/target/debug/deps/libtracing-fbcd174f63276144.rmeta --extern tracing_subscriber=/opt/rustwide/target/debug/deps/libtracing_subscriber-dc996f835b648358.rmeta --extern url=/opt/rustwide/target/debug/deps/liburl-51e81bbd4892d5a9.rmeta --cap-lints=warn --crate-version 0.5.3` (exit status: 1)
[INFO] running `Command { std: "docker" "inspect" "208bc6e80666aec54562cf5b9ca0959ad858f9bd6482d20f4682370465f6bd47", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "208bc6e80666aec54562cf5b9ca0959ad858f9bd6482d20f4682370465f6bd47", kill_on_drop: false }`
[INFO] [stdout] 208bc6e80666aec54562cf5b9ca0959ad858f9bd6482d20f4682370465f6bd47
