[INFO] fetching crate chiral-computing-unit 0.1.2...
[INFO] documenting chiral-computing-unit-0.1.2 against 1.75.0 for beta-1.76-rustdoc-1
[INFO] extracting crate chiral-computing-unit 0.1.2 into /workspace/builds/worker-1-tc1/source
[INFO] validating manifest of crates.io crate chiral-computing-unit 0.1.2 on toolchain 1.75.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate chiral-computing-unit 0.1.2
[INFO] finished tweaking crates.io crate chiral-computing-unit 0.1.2
[INFO] tweaked toml for crates.io crate chiral-computing-unit 0.1.2 written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded number_prefix v0.4.0
[INFO] [stderr]   Downloaded permutation v0.4.1
[INFO] [stderr]   Downloaded openbabel v0.5.3
[INFO] [stderr]   Downloaded chiral-common v0.1.4
[INFO] [stderr]   Downloaded cxxbridge-flags v1.0.115
[INFO] [stderr]   Downloaded chiral-data v0.1.2
[INFO] [stderr]   Downloaded nanoid v0.4.0
[INFO] [stderr]   Downloaded chiral-derive v0.1.4
[INFO] [stderr]   Downloaded indicatif v0.17.7
[INFO] [stderr]   Downloaded cxxbridge-macro v1.0.115
[INFO] [stderr]   Downloaded cxx v1.0.115
[INFO] [stderr]   Downloaded openbabel-sys v0.5.3+openbabel-3.1.1
[INFO] [stderr]   Downloaded chiral-operator v0.1.2
[INFO] [stderr]   Downloaded portable-atomic v1.6.0
[INFO] [stderr]   Downloaded cxx-build v1.0.115
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] efd6c7e32cc05ee84be0b2e661c5b636f78350033b95c2b72dd7429336994a37
[INFO] running `Command { std: "docker" "start" "-a" "efd6c7e32cc05ee84be0b2e661c5b636f78350033b95c2b72dd7429336994a37", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "efd6c7e32cc05ee84be0b2e661c5b636f78350033b95c2b72dd7429336994a37", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "efd6c7e32cc05ee84be0b2e661c5b636f78350033b95c2b72dd7429336994a37", kill_on_drop: false }`
[INFO] [stdout] efd6c7e32cc05ee84be0b2e661c5b636f78350033b95c2b72dd7429336994a37
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3c4e7afd876dbf0776dd3571856976dc5046674d354b9172ef00a93130481da4
[INFO] running `Command { std: "docker" "start" "-a" "3c4e7afd876dbf0776dd3571856976dc5046674d354b9172ef00a93130481da4", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.76
[INFO] [stderr]    Compiling serde v1.0.195
[INFO] [stderr]    Compiling scratch v1.0.7
[INFO] [stderr]     Checking anstyle-parse v0.2.3
[INFO] [stderr]    Compiling portable-atomic v1.6.0
[INFO] [stderr]    Compiling link-cplusplus v1.0.9
[INFO] [stderr]    Compiling crc32fast v1.3.2
[INFO] [stderr]    Compiling cxxbridge-flags v1.0.115
[INFO] [stderr]    Compiling termcolor v1.4.0
[INFO] [stderr]    Compiling unicode-width v0.1.11
[INFO] [stderr]     Checking anstyle v1.0.4
[INFO] [stderr]     Checking anstyle-query v1.0.2
[INFO] [stderr]    Compiling codespan-reporting v0.11.1
[INFO] [stderr]     Checking anstream v0.6.5
[INFO] [stderr]    Compiling cxx v1.0.115
[INFO] [stderr]    Compiling serde_json v1.0.111
[INFO] [stderr]     Checking clap_lex v0.6.0
[INFO] [stderr]    Compiling anyhow v1.0.79
[INFO] [stderr]     Checking adler v1.0.2
[INFO] [stderr]     Checking clap_builder v4.4.12
[INFO] [stderr]     Checking miniz_oxide v0.7.1
[INFO] [stderr]     Checking console v0.15.7
[INFO] [stderr]    Compiling quote v1.0.35
[INFO] [stderr]    Compiling thiserror v1.0.56
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking number_prefix v0.4.0
[INFO] [stderr]    Compiling syn v2.0.48
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking iana-time-zone v0.1.59
[INFO] [stderr]    Compiling fs_extra v1.3.0
[INFO] [stderr]     Checking flate2 v1.0.28
[INFO] [stderr]     Checking indicatif v0.17.7
[INFO] [stderr]     Checking home v0.5.9
[INFO] [stderr]     Checking permutation v0.4.1
[INFO] [stderr]     Checking nanoid v0.4.0
[INFO] [stderr]    Compiling cxx-build v1.0.115
[INFO] [stderr]    Compiling serde_derive v1.0.195
[INFO] [stderr]    Compiling clap_derive v4.4.7
[INFO] [stderr]    Compiling thiserror-impl v1.0.56
[INFO] [stderr]    Compiling cxxbridge-macro v1.0.115
[INFO] [stderr]    Compiling strum_macros v0.24.3
[INFO] [stderr]    Compiling chiral-derive v0.1.4
[INFO] [stderr]    Compiling openbabel-sys v0.5.3+openbabel-3.1.1
[INFO] [stderr]     Checking clap v4.4.13
[INFO] [stderr]     Checking strum v0.24.1
[INFO] [stderr]     Checking chrono v0.4.31
[INFO] [stderr]     Checking chiral-common v0.1.4
[INFO] [stderr]     Checking chiral-data v0.1.2
[INFO] [stdout] error[E0433]: failed to resolve: could not find `fs` in `chiral_common`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/chiral-data-0.1.2/src/lib.rs:33:43
[INFO] [stdout]    |
[INFO] [stdout] 33 |             let filepath = chiral_common::fs::default_dir().join(kind.filename());
[INFO] [stdout]    |                                           ^^ could not find `fs` in `chiral_common`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0412]: cannot find type `DatasetID` in crate `chiral_common`
[INFO] [stdout]  --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/chiral-data-0.1.2/src/doc/smiles.rs:9:29
[INFO] [stdout]   |
[INFO] [stdout] 9 |     ids: Vec<chiral_common::DatasetID>,
[INFO] [stdout]   |                             ^^^^^^^^^ not found in `chiral_common`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0412]: cannot find type `SMILES` in crate `chiral_common`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/chiral-data-0.1.2/src/doc/smiles.rs:10:32
[INFO] [stdout]    |
[INFO] [stdout] 10 |     smiles: Vec<chiral_common::SMILES>,
[INFO] [stdout]    |                                ^^^^^^ not found in `chiral_common`
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this type alias
[INFO] [stdout]    |
[INFO] [stdout] 5  + use chiral_common::app::chem::types::SMILES;
[INFO] [stdout]    |
[INFO] [stdout] help: if you import `SMILES`, refer to it directly
[INFO] [stdout]    |
[INFO] [stdout] 10 -     smiles: Vec<chiral_common::SMILES>,
[INFO] [stdout] 10 +     smiles: Vec<SMILES>,
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0412]: cannot find type `DatasetID` in crate `chiral_common`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/chiral-data-0.1.2/src/doc/smiles.rs:14:43
[INFO] [stdout]    |
[INFO] [stdout] 14 |     pub fn new(ids_in: Vec<chiral_common::DatasetID>, smiles_in: Vec<chiral_common::SMILES>) -> Self {
[INFO] [stdout]    |                                           ^^^^^^^^^ not found in `chiral_common`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0412]: cannot find type `SMILES` in crate `chiral_common`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/chiral-data-0.1.2/src/doc/smiles.rs:14:85
[INFO] [stdout]    |
[INFO] [stdout] 14 |     pub fn new(ids_in: Vec<chiral_common::DatasetID>, smiles_in: Vec<chiral_common::SMILES>) -> Self {
[INFO] [stdout]    |                                                                                     ^^^^^^ not found in `chiral_common`
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this type alias
[INFO] [stdout]    |
[INFO] [stdout] 5  + use chiral_common::app::chem::types::SMILES;
[INFO] [stdout]    |
[INFO] [stdout] help: if you import `SMILES`, refer to it directly
[INFO] [stdout]    |
[INFO] [stdout] 14 -     pub fn new(ids_in: Vec<chiral_common::DatasetID>, smiles_in: Vec<chiral_common::SMILES>) -> Self {
[INFO] [stdout] 14 +     pub fn new(ids_in: Vec<chiral_common::DatasetID>, smiles_in: Vec<SMILES>) -> Self {
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0412]: cannot find type `SerializedFormat` in crate `chiral_common`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/chiral-data-0.1.2/src/doc/smiles.rs:24:47
[INFO] [stdout]    |
[INFO] [stdout] 24 |     pub fn serialize(&self) -> chiral_common::SerializedFormat { serde_json::to_string(self).unwrap() }
[INFO] [stdout]    |                                               ^^^^^^^^^^^^^^^^ not found in `chiral_common`
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this type alias
[INFO] [stdout]    |
[INFO] [stdout] 5  + use chiral_common::traits::SerializedFormat;
[INFO] [stdout]    |
[INFO] [stdout] help: if you import `SerializedFormat`, refer to it directly
[INFO] [stdout]    |
[INFO] [stdout] 24 -     pub fn serialize(&self) -> chiral_common::SerializedFormat { serde_json::to_string(self).unwrap() }
[INFO] [stdout] 24 +     pub fn serialize(&self) -> SerializedFormat { serde_json::to_string(self).unwrap() }
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0412]: cannot find type `SerializedFormat` in crate `chiral_common`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/chiral-data-0.1.2/src/doc/smiles.rs:25:49
[INFO] [stdout]    |
[INFO] [stdout] 25 |     pub fn deserialize(content: &chiral_common::SerializedFormat) -> Self { serde_json::from_str(content).unwrap() }
[INFO] [stdout]    |                                                 ^^^^^^^^^^^^^^^^ not found in `chiral_common`
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this type alias
[INFO] [stdout]    |
[INFO] [stdout] 5  + use chiral_common::traits::SerializedFormat;
[INFO] [stdout]    |
[INFO] [stdout] help: if you import `SerializedFormat`, refer to it directly
[INFO] [stdout]    |
[INFO] [stdout] 25 -     pub fn deserialize(content: &chiral_common::SerializedFormat) -> Self { serde_json::from_str(content).unwrap() }
[INFO] [stdout] 25 +     pub fn deserialize(content: &SerializedFormat) -> Self { serde_json::from_str(content).unwrap() }
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0412]: cannot find type `DatasetID` in crate `chiral_common`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/chiral-data-0.1.2/src/doc/smiles.rs:27:50
[INFO] [stdout]    |
[INFO] [stdout] 27 |     pub fn get_smiles(&self, id: &chiral_common::DatasetID) -> Option<&chiral_common::SMILES> {
[INFO] [stdout]    |                                                  ^^^^^^^^^ not found in `chiral_common`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0412]: cannot find type `SMILES` in crate `chiral_common`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/chiral-data-0.1.2/src/doc/smiles.rs:27:87
[INFO] [stdout]    |
[INFO] [stdout] 27 |     pub fn get_smiles(&self, id: &chiral_common::DatasetID) -> Option<&chiral_common::SMILES> {
[INFO] [stdout]    |                                                                                       ^^^^^^ not found in `chiral_common`
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this type alias
[INFO] [stdout]    |
[INFO] [stdout] 5  + use chiral_common::app::chem::types::SMILES;
[INFO] [stdout]    |
[INFO] [stdout] help: if you import `SMILES`, refer to it directly
[INFO] [stdout]    |
[INFO] [stdout] 27 -     pub fn get_smiles(&self, id: &chiral_common::DatasetID) -> Option<&chiral_common::SMILES> {
[INFO] [stdout] 27 +     pub fn get_smiles(&self, id: &chiral_common::DatasetID) -> Option<&SMILES> {
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0412]: cannot find type `SMILES` in crate `chiral_common`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/chiral-data-0.1.2/src/doc/smiles.rs:34:57
[INFO] [stdout]    |
[INFO] [stdout] 34 |     pub fn get_smiles_vec(&self) -> &Vec<chiral_common::SMILES> { &self.smiles }
[INFO] [stdout]    |                                                         ^^^^^^ not found in `chiral_common`
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this type alias
[INFO] [stdout]    |
[INFO] [stdout] 5  + use chiral_common::app::chem::types::SMILES;
[INFO] [stdout]    |
[INFO] [stdout] help: if you import `SMILES`, refer to it directly
[INFO] [stdout]    |
[INFO] [stdout] 34 -     pub fn get_smiles_vec(&self) -> &Vec<chiral_common::SMILES> { &self.smiles }
[INFO] [stdout] 34 +     pub fn get_smiles_vec(&self) -> &Vec<SMILES> { &self.smiles }
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0412]: cannot find type `DatasetID` in crate `chiral_common`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/chiral-data-0.1.2/src/doc/smiles.rs:35:50
[INFO] [stdout]    |
[INFO] [stdout] 35 |     pub fn get_ids(&self) -> &Vec<chiral_common::DatasetID> { &self.ids }
[INFO] [stdout]    |                                                  ^^^^^^^^^ not found in `chiral_common`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 11 previous errors
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] Some errors have detailed explanations: E0412, E0433.
[INFO] [stdout] 
[INFO] [stdout] For more information about an error, try `rustc --explain E0412`.
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `chiral-data` (lib) due to 12 previous errors
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "3c4e7afd876dbf0776dd3571856976dc5046674d354b9172ef00a93130481da4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3c4e7afd876dbf0776dd3571856976dc5046674d354b9172ef00a93130481da4", kill_on_drop: false }`
[INFO] [stdout] 3c4e7afd876dbf0776dd3571856976dc5046674d354b9172ef00a93130481da4
