[INFO] cloning repository https://github.com/Curryrasul/labs-bioinformatics
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Curryrasul/labs-bioinformatics" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCurryrasul%2Flabs-bioinformatics", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCurryrasul%2Flabs-bioinformatics'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] d40c7dae4f2955951b5f7fcef83c0c2e74fee2c2
[INFO] documenting Curryrasul/labs-bioinformatics against 1.75.0 for beta-1.76-rustdoc-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCurryrasul%2Flabs-bioinformatics" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/Curryrasul/labs-bioinformatics on toolchain 1.75.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/Curryrasul/labs-bioinformatics
[INFO] finished tweaking git repo https://github.com/Curryrasul/labs-bioinformatics
[INFO] tweaked toml for git repo https://github.com/Curryrasul/labs-bioinformatics written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] e5a926053ba318fd75deb7e63f43966521e542b59739a616634cd5b96488ff73
[INFO] running `Command { std: "docker" "start" "-a" "e5a926053ba318fd75deb7e63f43966521e542b59739a616634cd5b96488ff73", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e5a926053ba318fd75deb7e63f43966521e542b59739a616634cd5b96488ff73", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e5a926053ba318fd75deb7e63f43966521e542b59739a616634cd5b96488ff73", kill_on_drop: false }`
[INFO] [stdout] e5a926053ba318fd75deb7e63f43966521e542b59739a616634cd5b96488ff73
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a03c7883a9a949e2e71cd186ef6dc6bb6a753102db3164f19ce0356ecbe6e7d7
[INFO] running `Command { std: "docker" "start" "-a" "a03c7883a9a949e2e71cd186ef6dc6bb6a753102db3164f19ce0356ecbe6e7d7", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stderr]     Checking needleman-wunsch v0.1.0 (/opt/rustwide/workdir/needleman-wunsch)
[INFO] [stderr]  Documenting nw-affin v0.1.0 (/opt/rustwide/workdir/nw-affin)
[INFO] [stderr]  Documenting needleman-wunsch v0.1.0 (/opt/rustwide/workdir/needleman-wunsch)
[INFO] [stderr]  Documenting hirschberg v0.1.0 (/opt/rustwide/workdir/hirschberg)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 0.29s
[INFO] [stderr]    Generated /opt/rustwide/target/doc/hirschberg/index.html
[INFO] [stderr]    Generated /opt/rustwide/target/doc/needleman_wunsch/index.html
[INFO] [stderr]    Generated /opt/rustwide/target/doc/nw_affin/index.html
[INFO] running `Command { std: "docker" "inspect" "a03c7883a9a949e2e71cd186ef6dc6bb6a753102db3164f19ce0356ecbe6e7d7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a03c7883a9a949e2e71cd186ef6dc6bb6a753102db3164f19ce0356ecbe6e7d7", kill_on_drop: false }`
[INFO] [stdout] a03c7883a9a949e2e71cd186ef6dc6bb6a753102db3164f19ce0356ecbe6e7d7
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "DOCS_RS=1" "-e" "RUSTC_BOOTSTRAP=1" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "rustdoc" "--lib" "-Zrustdoc-map" "-Z" "unstable-options" "--config" "build.rustdocflags=[\"-Z\", \"unstable-options\", \"--document-private-items\"]" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 7b8f7e1f346449d671ebd4732e9c607d837c51e5cc00b6fa61b28e9dad51ce2f
[INFO] running `Command { std: "docker" "start" "-a" "7b8f7e1f346449d671ebd4732e9c607d837c51e5cc00b6fa61b28e9dad51ce2f", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stderr] error: manifest path `/opt/rustwide/workdir/Cargo.toml` is a virtual manifest, but this command requires running against an actual package in this workspace
[INFO] running `Command { std: "docker" "inspect" "7b8f7e1f346449d671ebd4732e9c607d837c51e5cc00b6fa61b28e9dad51ce2f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7b8f7e1f346449d671ebd4732e9c607d837c51e5cc00b6fa61b28e9dad51ce2f", kill_on_drop: false }`
[INFO] [stdout] 7b8f7e1f346449d671ebd4732e9c607d837c51e5cc00b6fa61b28e9dad51ce2f
[INFO] documenting Curryrasul/labs-bioinformatics against beta-2023-12-22 for beta-1.76-rustdoc-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCurryrasul%2Flabs-bioinformatics" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/Curryrasul/labs-bioinformatics on toolchain beta-2023-12-22
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2023-12-22" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/Curryrasul/labs-bioinformatics
[INFO] finished tweaking git repo https://github.com/Curryrasul/labs-bioinformatics
[INFO] tweaked toml for git repo https://github.com/Curryrasul/labs-bioinformatics written to /workspace/builds/worker-5-tc2/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2023-12-22" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2023-12-22" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2023-12-22" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 630238b032d32c8e71909f32e9149222f3e14c8e7442f6e64522dccb19a5b33f
[INFO] running `Command { std: "docker" "start" "-a" "630238b032d32c8e71909f32e9149222f3e14c8e7442f6e64522dccb19a5b33f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "630238b032d32c8e71909f32e9149222f3e14c8e7442f6e64522dccb19a5b33f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "630238b032d32c8e71909f32e9149222f3e14c8e7442f6e64522dccb19a5b33f", kill_on_drop: false }`
[INFO] [stdout] 630238b032d32c8e71909f32e9149222f3e14c8e7442f6e64522dccb19a5b33f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2023-12-22" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c367a03ef7446b5e66280ace11488d035eb901f616b32cffe8629a28bb73be7b
[INFO] running `Command { std: "docker" "start" "-a" "c367a03ef7446b5e66280ace11488d035eb901f616b32cffe8629a28bb73be7b", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stderr]     Checking needleman-wunsch v0.1.0 (/opt/rustwide/workdir/needleman-wunsch)
[INFO] [stderr]  Documenting nw-affin v0.1.0 (/opt/rustwide/workdir/nw-affin)
[INFO] [stderr]  Documenting needleman-wunsch v0.1.0 (/opt/rustwide/workdir/needleman-wunsch)
[INFO] [stderr]  Documenting hirschberg v0.1.0 (/opt/rustwide/workdir/hirschberg)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 0.30s
[INFO] [stderr]    Generated /opt/rustwide/target/doc/hirschberg/index.html
[INFO] [stderr]    Generated /opt/rustwide/target/doc/needleman_wunsch/index.html
[INFO] [stderr]    Generated /opt/rustwide/target/doc/nw_affin/index.html
[INFO] running `Command { std: "docker" "inspect" "c367a03ef7446b5e66280ace11488d035eb901f616b32cffe8629a28bb73be7b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c367a03ef7446b5e66280ace11488d035eb901f616b32cffe8629a28bb73be7b", kill_on_drop: false }`
[INFO] [stdout] c367a03ef7446b5e66280ace11488d035eb901f616b32cffe8629a28bb73be7b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "RUSTC_BOOTSTRAP=1" "-e" "DOCS_RS=1" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2023-12-22" "rustdoc" "--lib" "-Zrustdoc-map" "-Z" "unstable-options" "--config" "build.rustdocflags=[\"-Z\", \"unstable-options\", \"--document-private-items\"]" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 702e6a7c9db9cab59bea8e239b771457b1f4f0eda09a8f1ea60eb99cc7dbf4eb
[INFO] running `Command { std: "docker" "start" "-a" "702e6a7c9db9cab59bea8e239b771457b1f4f0eda09a8f1ea60eb99cc7dbf4eb", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stderr] error: manifest path `/opt/rustwide/workdir/Cargo.toml` is a virtual manifest, but this command requires running against an actual package in this workspace
[INFO] running `Command { std: "docker" "inspect" "702e6a7c9db9cab59bea8e239b771457b1f4f0eda09a8f1ea60eb99cc7dbf4eb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "702e6a7c9db9cab59bea8e239b771457b1f4f0eda09a8f1ea60eb99cc7dbf4eb", kill_on_drop: false }`
[INFO] [stdout] 702e6a7c9db9cab59bea8e239b771457b1f4f0eda09a8f1ea60eb99cc7dbf4eb
