[INFO] fetching crate tskit 0.14.1...
[INFO] testing tskit-0.14.1 against 1.75.0 for beta-1.76-1
[INFO] extracting crate tskit 0.14.1 into /workspace/builds/worker-0-tc1/source
[INFO] validating manifest of crates.io crate tskit 0.14.1 on toolchain 1.75.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate tskit 0.14.1
[INFO] removed 0 missing examples
[INFO] finished tweaking crates.io crate tskit 0.14.1
[INFO] tweaked toml for crates.io crate tskit 0.14.1 written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] crate crates.io crate tskit 0.14.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded delegate v0.9.0
[INFO] [stderr]   Downloaded mbox v0.6.0
[INFO] [stderr]   Downloaded tskit-derive v0.2.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 43dd55792342dc83f69b6deab51d251e87b5448e3888c08cca1fa6cf60946f57
[INFO] running `Command { std: "docker" "start" "-a" "43dd55792342dc83f69b6deab51d251e87b5448e3888c08cca1fa6cf60946f57", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "43dd55792342dc83f69b6deab51d251e87b5448e3888c08cca1fa6cf60946f57", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "43dd55792342dc83f69b6deab51d251e87b5448e3888c08cca1fa6cf60946f57", kill_on_drop: false }`
[INFO] [stdout] 43dd55792342dc83f69b6deab51d251e87b5448e3888c08cca1fa6cf60946f57
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 0b1c155960401e6a70370d2433700320a3c130db8ab871dfd167d9a435ad9791
[INFO] running `Command { std: "docker" "start" "-a" "0b1c155960401e6a70370d2433700320a3c130db8ab871dfd167d9a435ad9791", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.56
[INFO] [stderr]    Compiling unicode-ident v1.0.8
[INFO] [stderr]    Compiling quote v1.0.26
[INFO] [stderr]    Compiling libc v0.2.141
[INFO] [stderr]    Compiling thiserror v1.0.40
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling ucd-trie v0.1.5
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]    Compiling bindgen v0.63.0
[INFO] [stderr]    Compiling either v1.8.1
[INFO] [stderr]    Compiling regex-syntax v0.6.29
[INFO] [stderr]    Compiling shlex v1.1.0
[INFO] [stderr]    Compiling libloading v0.7.4
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling bitflags v1.3.2
[INFO] [stderr]    Compiling pkg-config v0.3.26
[INFO] [stderr]    Compiling stable_deref_trait v1.2.0
[INFO] [stderr]    Compiling streaming-iterator v0.1.9
[INFO] [stderr]    Compiling clang-sys v1.6.1
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling syn v2.0.13
[INFO] [stderr]    Compiling jobserver v0.1.26
[INFO] [stderr]    Compiling which v4.4.0
[INFO] [stderr]    Compiling cc v1.0.79
[INFO] [stderr]    Compiling regex v1.7.3
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.40
[INFO] [stderr]    Compiling pest v2.5.7
[INFO] [stderr]    Compiling delegate v0.9.0
[INFO] [stderr]    Compiling semver-parser v0.10.2
[INFO] [stderr]    Compiling semver v0.11.0
[INFO] [stderr]    Compiling rustc_version v0.3.3
[INFO] [stderr]    Compiling mbox v0.6.0
[INFO] [stderr]    Compiling tskit v0.14.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 16.32s
[INFO] running `Command { std: "docker" "inspect" "0b1c155960401e6a70370d2433700320a3c130db8ab871dfd167d9a435ad9791", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0b1c155960401e6a70370d2433700320a3c130db8ab871dfd167d9a435ad9791", kill_on_drop: false }`
[INFO] [stdout] 0b1c155960401e6a70370d2433700320a3c130db8ab871dfd167d9a435ad9791
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3019b2d9dc1c5b9396b0a997090078a85c2847987be3de5be873a7ca3ccb8620
[INFO] running `Command { std: "docker" "start" "-a" "3019b2d9dc1c5b9396b0a997090078a85c2847987be3de5be873a7ca3ccb8620", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.141
[INFO] [stderr]    Compiling libm v0.2.6
[INFO] [stderr]    Compiling version_check v0.9.4
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling serde_derive v1.0.159
[INFO] [stderr]    Compiling io-lifetimes v1.0.9
[INFO] [stderr]    Compiling libloading v0.7.4
[INFO] [stderr]    Compiling rustix v0.37.7
[INFO] [stderr]    Compiling serde v1.0.159
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling linux-raw-sys v0.3.1
[INFO] [stderr]    Compiling indexmap v1.9.3
[INFO] [stderr]    Compiling num-bigint v0.4.3
[INFO] [stderr]    Compiling fastrand v1.9.0
[INFO] [stderr]    Compiling fnv v1.0.7
[INFO] [stderr]    Compiling anyhow v1.0.70
[INFO] [stderr]    Compiling serde_json v1.0.95
[INFO] [stderr]    Compiling byteorder v1.4.3
[INFO] [stderr]    Compiling os_str_bytes v6.5.0
[INFO] [stderr]    Compiling bit-vec v0.6.3
[INFO] [stderr]    Compiling hashbrown v0.12.3
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling bit-set v0.5.3
[INFO] [stderr]    Compiling clap_lex v0.2.4
[INFO] [stderr]    Compiling itoa v1.0.6
[INFO] [stderr]    Compiling once_cell v1.17.1
[INFO] [stderr]    Compiling termcolor v1.2.0
[INFO] [stderr]    Compiling textwrap v0.16.0
[INFO] [stderr]    Compiling iter-read v0.3.1
[INFO] [stderr]    Compiling jobserver v0.1.26
[INFO] [stderr]    Compiling clang-sys v1.6.1
[INFO] [stderr]    Compiling which v4.4.0
[INFO] [stderr]    Compiling quick-error v2.0.1
[INFO] [stderr]    Compiling strsim v0.10.0
[INFO] [stderr]    Compiling ryu v1.0.13
[INFO] [stderr]    Compiling unarray v0.1.4
[INFO] [stderr]    Compiling humantime v2.1.0
[INFO] [stderr]    Compiling cc v1.0.79
[INFO] [stderr]    Compiling clap_derive v3.2.18
[INFO] [stderr]    Compiling getrandom v0.2.8
[INFO] [stderr]    Compiling wait-timeout v0.2.0
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling mbox v0.6.0
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand_xorshift v0.3.0
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling bindgen v0.63.0
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling tempfile v3.5.0
[INFO] [stderr]    Compiling clap v3.2.23
[INFO] [stderr]    Compiling rusty-fork v0.3.0
[INFO] [stderr]    Compiling proptest v1.1.0
[INFO] [stderr]    Compiling serde-pickle v1.1.1
[INFO] [stderr]    Compiling bincode v1.3.3
[INFO] [stderr]    Compiling tskit v0.14.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 15.28s
[INFO] running `Command { std: "docker" "inspect" "3019b2d9dc1c5b9396b0a997090078a85c2847987be3de5be873a7ca3ccb8620", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3019b2d9dc1c5b9396b0a997090078a85c2847987be3de5be873a7ca3ccb8620", kill_on_drop: false }`
[INFO] [stdout] 3019b2d9dc1c5b9396b0a997090078a85c2847987be3de5be873a7ca3ccb8620
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 3e343deb726ab8b0f8af9cfbf301fe39c5fe96726694416cba4085665ba7cfbd
[INFO] running `Command { std: "docker" "start" "-a" "3e343deb726ab8b0f8af9cfbf301fe39c5fe96726694416cba4085665ba7cfbd", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.09s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/tskit-04cbbd7939d16365)
[INFO] [stdout] 
[INFO] [stdout] running 88 tests
[INFO] [stdout] test _macros::test::test_handle_good_return_value ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_compressed_matrix_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__IO_FILE ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_diff_iter_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_bookmark_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_blkalloc_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_avl_tree_int_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_table_sorter_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_edge_list_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_kaitem_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_edge_list_node_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_kastore_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_identity_segment_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_avl_node_int_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_ls_hmm_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_edge_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_argsort_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_edge_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_individual_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_individual_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_identity_segments_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_mutation_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_migration_t ... ok
[INFO] [stdout] test _macros::test::test_handle_return_value_test_panic ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_node_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_mutation_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_migration_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_ld_calc_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_node_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_provenance_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_site_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_identity_segment_list_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_population_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_site_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_reference_sequence_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_recomb_required_record ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_table_collection_t__bindgen_ty_1 ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_population_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_tree_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_state_transition_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_tree_t__bindgen_ty_1 ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_treeseq_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_variant_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_value_transition_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_vargen_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_site_probability_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_provenance_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_table_collection_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_transition_stack_t ... ok
[INFO] [stdout] test error::test::test_anyhow_compatability ... ok
[INFO] [stdout] test error::test::test_extract_error_message ... ok
[INFO] [stdout] test error::test::test_error_formatting ... ok
[INFO] [stdout] test flags::tests::node_is_not_sample ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_viterbi_matrix_t ... ok
[INFO] [stdout] test metadata::test_serde::test_encoded_metadata_roundtrip ... ok
[INFO] [stdout] test metadata::test_serde::test_metadata_round_trip_wrong_type ... ok
[INFO] [stdout] test metadata::tests::test_metadata_round_trip ... ok
[INFO] [stdout] test newtypes::test_usize_to_size_type ... ok
[INFO] [stdout] test flags::tests::node_is_sample ... ok
[INFO] [stdout] test newtypes::test_f64_newtype_Display ... ok
[INFO] [stdout] test metadata::tests::test_vec8_cast_to_c_string ... ok
[INFO] [stdout] test metadata::test_serde::test_metadata_round_trip ... ok
[INFO] [stdout] test error::test::test_get_tskit_error_message ... ok
[INFO] [stdout] test _macros::test::test_tskit_panic - should panic ... ok
[INFO] [stdout] test metadata::tests::test_encoded_metadata_roundtrip ... ok
[INFO] [stdout] test sys::test_error_message ... ok
[INFO] [stdout] test test_simplification::tests::test_simplify_tables ... ok
[INFO] [stdout] test trees::test_trees::test_create_treeseq_from_tables ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_no_roots ... ok
[INFO] [stdout] test trees::test_trees::test_array_lifetime ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_samples_two_trees ... ok
[INFO] [stdout] test trees::test_trees::test_reverse_tree_iteration ... ok
[INFO] [stdout] test types::test::test_bookmark_mutability ... ok
[INFO] [stdout] test test_tsk_variables::tests::test_node_is_sample ... ok
[INFO] [stdout] test trees::test_trees::test_samples_iterator_error_when_not_tracking_samples ... ok
[INFO] [stdout] test trees::test_trees::test_dump_tables ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_tree_seq_with_one_tree ... ok
[INFO] [stdout] test tests::test_c_api_version ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_samples ... ok
[INFO] [stdout] test table_views::table_views_tests::test_treeseq ... ok
[INFO] [stdout] test trees::test_treeeseq_send_sync::build_arc ... ok
[INFO] [stdout] test test_simplification::tests::test_simplify_treeseq ... ok
[INFO] [stdout] test trees::test_trees::test_create_treeseq_new_from_tables ... ok
[INFO] [stdout] test trees::test_trees::test_kc_distance_naive_test ... ok
[INFO] [stdout] test node_table::test_owned_node_table::test_add_row ... ok
[INFO] [stdout] test sys::test_error_code ... ok
[INFO] [stdout] test trees::test_trees::test_num_tracked_samples ... ok
[INFO] [stdout] test trees::test_trees::test_num_tracked_samples_not_tracking_sample_counts - should panic ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 88 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.04s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/book_metadata.rs (/opt/rustwide/target/debug/deps/book_metadata-516316f09cc9f6f8)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/book_table_collection.rs (/opt/rustwide/target/debug/deps/book_table_collection-41b8fdf92a819114)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test add_node_handle_error ... ok
[INFO] [stdout] test simple_table_collection_creation_with_newtype ... ok
[INFO] [stdout] test get_data_from_edge_table ... ok
[INFO] [stdout] test add_node_without_metadata ... ok
[INFO] [stdout] test simple_table_collection_creation ... ok
[INFO] [stdout] test test_adding_node_table_row_with_defaults_and_metadata_requiring_clone ... ok
[INFO] [stdout] test test_adding_node_table_row_with_defaults_and_metadata ... ok
[INFO] [stdout] test test_adding_node_table_row_with_defaults ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/book_trees.rs (/opt/rustwide/target/debug/deps/book_trees-6c5c851dc4c08d9b)
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test initialize_from_table_collection ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/example_flags.rs (/opt/rustwide/target/debug/deps/example_flags-fde4c93dc03ce2ff)
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test test_clip_invalid_flags ... ok
[INFO] [stdout] test test_example_node_flags ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/experimental.rs (/opt/rustwide/target/debug/deps/experimental-6501867fbad084b2)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/test_id_types.rs (/opt/rustwide/target/debug/deps/test_id_types-edb86ba4169b4c1d)
[INFO] [stderr]      Running tests/test_metadata.rs (/opt/rustwide/target/debug/deps/test_metadata-c0ffd82fdcb8d60c)
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test test_node_id_as_usize ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/test_tables.rs (/opt/rustwide/target/debug/deps/test_tables-41d1fe387bb5567b)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_individual ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_edge ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_migration ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_node ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_mutation ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_population ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_site ... ok
[INFO] [stdout] test test_empty_table_collection ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests tskit
[INFO] [stdout] 
[INFO] [stdout] running 148 tests
[INFO] [stdout] test src/edge_table.rs - edge_table::OwningEdgeTable (line 327) ... ok
[INFO] [stdout] test src/bindings.rs - bindings (line 12) ... ok
[INFO] [stdout] test src/error.rs - error::panic_on_tskit_error (line 65) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions (line 30) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions (line 37) ... ok
[INFO] [stdout] test src/edge_table.rs - edge_table::OwningEdgeTable (line 312) ... ok
[INFO] [stdout] test src/error.rs - error::get_tskit_error_message (line 93) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::filter_sites (line 124) ... ok
[INFO] [stdout] test src/error.rs - error::get_tskit_error_message (line 77) ... ok
[INFO] [stdout] test src/flags.rs - flags::NodeFlags (line 586) ... ok
[INFO] [stdout] test src/flags.rs - flags::NodeFlags (line 577) ... ok
[INFO] [stdout] test src/flags.rs - flags::IndividualTableSortOptions (line 327) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::filter_individuals (line 146) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::filter_populations (line 113) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::keep_input_roots (line 80) ... ok
[INFO] [stdout] test src/error.rs - error::get_tskit_error_message (line 86) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::reduce_to_site_topology (line 135) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::keep_unary (line 91) ... ok
[INFO] [stdout] test src/flags.rs - flags::NodeFlags (line 567) ... ok
[INFO] [stdout] test src/error.rs - error::panic_on_tskit_error (line 56) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 172) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 160) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 189) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 167) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 227) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 220) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 252) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 232) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::keep_unary_in_individuals (line 102) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 470) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 461) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 237) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 242) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 177) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 490) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 475) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 485) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 480) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 500) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 505) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeFlags (line 347) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 495) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableSortOptions (line 291) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableOutputOptions (line 395) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeFlags (line 361) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableSortOptions (line 300) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 221) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 283) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeSequenceFlags (line 432) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 302) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 233) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 256) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 314) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeFlags (line 356) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeSequenceFlags (line 423) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::OwningIndividualTable (line 455) ... ok
[INFO] [stdout] test src/migration_table.rs - migration_table::OwningMigrationTable (line 386) ... ok
[INFO] [stdout] test src/lib.rs - (line 35) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::OwningIndividualTable (line 442) ... ok
[INFO] [stdout] test src/metadata.rs - metadata (line 30) ... ok
[INFO] [stdout] test src/metadata.rs - metadata (line 76) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaultsWithMetadataNotCloneNotDebug (line 376) - compile fail ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaultsWithMetadataNotCloneNotDebug (line 412) - compile fail ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::NodeId (line 40) ... ok
[INFO] [stdout] test src/mutation_table.rs - mutation_table::OwningMutationTable (line 362) ... ok
[INFO] [stdout] test src/migration_table.rs - migration_table::OwningMigrationTable (line 374) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::Time (line 288) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::SizeType (line 147) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::NodeId (line 16) ... ok
[INFO] [stdout] test src/mutation_table.rs - mutation_table::OwningMutationTable (line 350) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::NodeId (line 56) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::time_slice_mut (line 745) - compile fail ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaults (line 255) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags (line 543) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaults (line 245) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 797) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 786) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::OwningNodeTable (line 892) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::individual (line 620) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::OwningNodeTable::add_row_with_defaults (line 974) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::population (line 577) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 835) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::time_slice_mut (line 755) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::time (line 518) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 811) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::OwningNodeTable (line 880) ... ok
[INFO] [stdout] test src/metadata.rs - metadata (line 103) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 822) ... ok
[INFO] [stdout] test src/site_table.rs - site_table::OwningSiteTable (line 277) ... ok
[INFO] [stdout] test src/population_table.rs - population_table::OwningPopulationTable (line 213) ... ok
[INFO] [stdout] test src/population_table.rs - population_table::OwningPopulationTable (line 225) ... ok
[INFO] [stdout] test src/site_table.rs - site_table::OwningSiteTable (line 265) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_migration_with_metadata (line 378) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge_with_metadata (line 272) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual_with_metadata (line 334) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_mutation_with_metadata (line 529) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection (line 33) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge (line 223) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge (line 251) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_migration (line 360) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual (line 293) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge (line 237) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual (line 314) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_node_with_metadata (line 451) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_population_with_metadata (line 564) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual (line 303) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_node_with_defaults (line 425) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_site_with_metadata (line 500) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_population (line 549) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::check_integrity (line 896) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::check_integrity (line 882) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::check_integrity (line 889) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::new (line 86) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::new (line 92) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_child_array (line 269) - compile fail ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::create_node_id_vector (line 1294) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::sequence_length (line 211) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_edges (line 970) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::new_from_file (line 165) ... FAILED
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_individuals (line 1119) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_sample_array (line 169) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::parent_array (line 59) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_sib_array (line 229) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::next_sample_array (line 132) - compile fail ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_migrations (line 1161) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_child_array (line 289) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_sib_array (line 249) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_sample_array (line 206) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::samples_array (line 93) - compile fail ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::topological_sort_individuals (line 685) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_mutations (line 1080) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_populations (line 1200) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_nodes (line 1007) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence (line 178) - compile fail ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::tree_iterator (line 364) - compile ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::tree_iterator (line 348) - compile fail ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_sites (line 1044) ... ok
[INFO] [stdout] test src/table_views.rs - table_views::TableViews::create_node_id_vector (line 206) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::next_sample_array (line 118) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_sample_array (line 155) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_sample_array (line 192) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::new (line 227) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::samples_array (line 79) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence (line 159) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::create_node_id_vector (line 551) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::tree_iterator (line 328) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::new (line 218) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::new (line 235) ... ok
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- src/table_collection.rs - table_collection::TableCollection::new_from_file (line 165) stdout ----
[INFO] [stdout] Test executable failed (exit status: 101).
[INFO] [stdout] 
[INFO] [stdout] stderr:
[INFO] [stdout] thread 'main' panicked at src/table_collection.rs:6:71:
[INFO] [stdout] called `Result::unwrap()` on an `Err` value: ErrorCode { code: -3 }
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x55e46b98cb0c - std::backtrace_rs::backtrace::libunwind::trace::ha637c64ce894333a
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/../../backtrace/src/backtrace/libunwind.rs:104:5
[INFO] [stdout]    1:     0x55e46b98cb0c - std::backtrace_rs::backtrace::trace_unsynchronized::h47f62dea28e0c88d
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stdout]    2:     0x55e46b98cb0c - std::sys_common::backtrace::_print_fmt::h9eef0abe20ede486
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/sys_common/backtrace.rs:67:5
[INFO] [stdout]    3:     0x55e46b98cb0c - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::hed7f999df88cc644
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/sys_common/backtrace.rs:44:22
[INFO] [stdout]    4:     0x55e46b9b0210 - core::fmt::rt::Argument::fmt::h1539a9308b8d058d
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/fmt/rt.rs:142:9
[INFO] [stdout]    5:     0x55e46b9b0210 - core::fmt::write::h3a39390d8560d9c9
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/fmt/mod.rs:1120:17
[INFO] [stdout]    6:     0x55e46b98afbf - std::io::Write::write_fmt::h5fc9997dfe05f882
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/io/mod.rs:1762:15
[INFO] [stdout]    7:     0x55e46b98c8f4 - std::sys_common::backtrace::_print::h894006fb5c6f3d45
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/sys_common/backtrace.rs:47:5
[INFO] [stdout]    8:     0x55e46b98c8f4 - std::sys_common::backtrace::print::h23a2d212c6fff936
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/sys_common/backtrace.rs:34:9
[INFO] [stdout]    9:     0x55e46b98de07 - std::panicking::default_hook::{{closure}}::h8a1d2ee00185001a
[INFO] [stdout]   10:     0x55e46b98db6f - std::panicking::default_hook::h6038f2eba384e475
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:292:9
[INFO] [stdout]   11:     0x55e46b98e288 - std::panicking::rust_panic_with_hook::h2b5517d590cab22e
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:779:13
[INFO] [stdout]   12:     0x55e46b98e16e - std::panicking::begin_panic_handler::{{closure}}::h233112c06e0ef43e
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:657:13
[INFO] [stdout]   13:     0x55e46b98cfd6 - std::sys_common::backtrace::__rust_end_short_backtrace::h6e893f24d7ebbff8
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/sys_common/backtrace.rs:170:18
[INFO] [stdout]   14:     0x55e46b98ded2 - rust_begin_unwind
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:645:5
[INFO] [stdout]   15:     0x55e46b95afe5 - core::panicking::panic_fmt::hbf0e066aabfa482c
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/panicking.rs:72:14
[INFO] [stdout]   16:     0x55e46b95b573 - core::result::unwrap_failed::hddb4fea594200c52
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/result.rs:1653:5
[INFO] [stdout]   17:     0x55e46b95c96a - core::result::Result<T,E>::unwrap::h72909821a4454223
[INFO] [stdout]   18:     0x55e46b95f97c - rust_out::main::_doctest_main_src_table_collection_rs_165_0::h6563b3dd1f27ba56
[INFO] [stdout]   19:     0x55e46b95f8c6 - rust_out::main::hc20c0d07e2402830
[INFO] [stdout]   20:     0x55e46b95c303 - core::ops::function::FnOnce::call_once::hbc459743598298c4
[INFO] [stdout]   21:     0x55e46b95bab6 - std::sys_common::backtrace::__rust_begin_short_backtrace::h62debe7d3058b76a
[INFO] [stdout]   22:     0x55e46b95bf99 - std::rt::lang_start::{{closure}}::h8f486f3e1e6418b2
[INFO] [stdout]   23:     0x55e46b988c27 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::hd95060ecd5e1ca24
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/ops/function.rs:284:13
[INFO] [stdout]   24:     0x55e46b988c27 - std::panicking::try::do_call::h6e8cf51db32a6e4b
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:552:40
[INFO] [stdout]   25:     0x55e46b988c27 - std::panicking::try::h3a52eefe24fe3c29
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:516:19
[INFO] [stdout]   26:     0x55e46b988c27 - std::panic::catch_unwind::h24c28c23c02c3841
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panic.rs:142:14
[INFO] [stdout]   27:     0x55e46b988c27 - std::rt::lang_start_internal::{{closure}}::h705d3c9cbc06ef47
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/rt.rs:148:48
[INFO] [stdout]   28:     0x55e46b988c27 - std::panicking::try::do_call::ha21f52ba13158470
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:552:40
[INFO] [stdout]   29:     0x55e46b988c27 - std::panicking::try::h5581346bf6aeb1f8
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:516:19
[INFO] [stdout]   30:     0x55e46b988c27 - std::panic::catch_unwind::h7919645a6b72e25b
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panic.rs:142:14
[INFO] [stdout]   31:     0x55e46b988c27 - std::rt::lang_start_internal::h12de51168669836e
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/rt.rs:148:20
[INFO] [stdout]   32:     0x55e46b95bf77 - std::rt::lang_start::h2c48f91a7bf85629
[INFO] [stdout]   33:     0x55e46b95fd65 - main
[INFO] [stdout]   34:     0x7fadf6273d90 - <unknown>
[INFO] [stdout]   35:     0x7fadf6273e40 - __libc_start_main
[INFO] [stdout]   36:     0x55e46b95b835 - _start
[INFO] [stdout]   37:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     src/table_collection.rs - table_collection::TableCollection::new_from_file (line 165)
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 147 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 5.17s
[INFO] [stdout] 
[INFO] [stderr] error: doctest failed, to rerun pass `--doc`
[INFO] running `Command { std: "docker" "inspect" "3e343deb726ab8b0f8af9cfbf301fe39c5fe96726694416cba4085665ba7cfbd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3e343deb726ab8b0f8af9cfbf301fe39c5fe96726694416cba4085665ba7cfbd", kill_on_drop: false }`
[INFO] [stdout] 3e343deb726ab8b0f8af9cfbf301fe39c5fe96726694416cba4085665ba7cfbd
[INFO] testing tskit-0.14.1 against beta-2023-12-22 for beta-1.76-1
[INFO] extracting crate tskit 0.14.1 into /workspace/builds/worker-0-tc2/source
[INFO] validating manifest of crates.io crate tskit 0.14.1 on toolchain beta-2023-12-22
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2023-12-22" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate tskit 0.14.1
[INFO] removed 0 missing examples
[INFO] finished tweaking crates.io crate tskit 0.14.1
[INFO] tweaked toml for crates.io crate tskit 0.14.1 written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] crate crates.io crate tskit 0.14.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2023-12-22" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2023-12-22" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 4c591bf92cc8259b7deb0ec978e82c9b17e3e759607206e6a1e4b82867072930
[INFO] running `Command { std: "docker" "start" "-a" "4c591bf92cc8259b7deb0ec978e82c9b17e3e759607206e6a1e4b82867072930", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4c591bf92cc8259b7deb0ec978e82c9b17e3e759607206e6a1e4b82867072930", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4c591bf92cc8259b7deb0ec978e82c9b17e3e759607206e6a1e4b82867072930", kill_on_drop: false }`
[INFO] [stdout] 4c591bf92cc8259b7deb0ec978e82c9b17e3e759607206e6a1e4b82867072930
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2023-12-22" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 5c24c0ac45792ebe595353cc295c9c05f220a14993602738e00085f649303371
[INFO] running `Command { std: "docker" "start" "-a" "5c24c0ac45792ebe595353cc295c9c05f220a14993602738e00085f649303371", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.56
[INFO] [stderr]    Compiling quote v1.0.26
[INFO] [stderr]    Compiling unicode-ident v1.0.8
[INFO] [stderr]    Compiling libc v0.2.141
[INFO] [stderr]    Compiling thiserror v1.0.40
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]    Compiling ucd-trie v0.1.5
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]    Compiling bindgen v0.63.0
[INFO] [stderr]    Compiling either v1.8.1
[INFO] [stderr]    Compiling regex-syntax v0.6.29
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling libloading v0.7.4
[INFO] [stderr]    Compiling shlex v1.1.0
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling bitflags v1.3.2
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling pkg-config v0.3.26
[INFO] [stderr]    Compiling stable_deref_trait v1.2.0
[INFO] [stderr]    Compiling streaming-iterator v0.1.9
[INFO] [stderr]    Compiling clang-sys v1.6.1
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling syn v2.0.13
[INFO] [stderr]    Compiling jobserver v0.1.26
[INFO] [stderr]    Compiling which v4.4.0
[INFO] [stderr]    Compiling cc v1.0.79
[INFO] [stderr]    Compiling regex v1.7.3
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.40
[INFO] [stderr]    Compiling pest v2.5.7
[INFO] [stderr]    Compiling delegate v0.9.0
[INFO] [stderr]    Compiling semver-parser v0.10.2
[INFO] [stderr]    Compiling semver v0.11.0
[INFO] [stderr]    Compiling rustc_version v0.3.3
[INFO] [stderr]    Compiling mbox v0.6.0
[INFO] [stderr]    Compiling tskit v0.14.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 15.69s
[INFO] running `Command { std: "docker" "inspect" "5c24c0ac45792ebe595353cc295c9c05f220a14993602738e00085f649303371", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5c24c0ac45792ebe595353cc295c9c05f220a14993602738e00085f649303371", kill_on_drop: false }`
[INFO] [stdout] 5c24c0ac45792ebe595353cc295c9c05f220a14993602738e00085f649303371
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2023-12-22" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 83b661f7d79b705e4351c2f96028cbc6c41fbf22b1afd3750c04d31dc22e14ee
[INFO] running `Command { std: "docker" "start" "-a" "83b661f7d79b705e4351c2f96028cbc6c41fbf22b1afd3750c04d31dc22e14ee", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.141
[INFO] [stderr]    Compiling version_check v0.9.4
[INFO] [stderr]    Compiling libm v0.2.6
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling serde_derive v1.0.159
[INFO] [stderr]    Compiling io-lifetimes v1.0.9
[INFO] [stderr]    Compiling libloading v0.7.4
[INFO] [stderr]    Compiling rustix v0.37.7
[INFO] [stderr]    Compiling serde v1.0.159
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling linux-raw-sys v0.3.1
[INFO] [stderr]    Compiling indexmap v1.9.3
[INFO] [stderr]    Compiling num-bigint v0.4.3
[INFO] [stderr]    Compiling fastrand v1.9.0
[INFO] [stderr]    Compiling byteorder v1.4.3
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling bit-vec v0.6.3
[INFO] [stderr]    Compiling os_str_bytes v6.5.0
[INFO] [stderr]    Compiling fnv v1.0.7
[INFO] [stderr]    Compiling serde_json v1.0.95
[INFO] [stderr]    Compiling hashbrown v0.12.3
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling anyhow v1.0.70
[INFO] [stderr]    Compiling clap_lex v0.2.4
[INFO] [stderr]    Compiling bit-set v0.5.3
[INFO] [stderr]    Compiling unarray v0.1.4
[INFO] [stderr]    Compiling iter-read v0.3.1
[INFO] [stderr]    Compiling textwrap v0.16.0
[INFO] [stderr]    Compiling quick-error v2.0.1
[INFO] [stderr]    Compiling once_cell v1.17.1
[INFO] [stderr]    Compiling jobserver v0.1.26
[INFO] [stderr]    Compiling which v4.4.0
[INFO] [stderr]    Compiling clang-sys v1.6.1
[INFO] [stderr]    Compiling itoa v1.0.6
[INFO] [stderr]    Compiling termcolor v1.2.0
[INFO] [stderr]    Compiling strsim v0.10.0
[INFO] [stderr]    Compiling ryu v1.0.13
[INFO] [stderr]    Compiling humantime v2.1.0
[INFO] [stderr]    Compiling cc v1.0.79
[INFO] [stderr]    Compiling clap_derive v3.2.18
[INFO] [stderr]    Compiling getrandom v0.2.8
[INFO] [stderr]    Compiling wait-timeout v0.2.0
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling mbox v0.6.0
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand_xorshift v0.3.0
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling bindgen v0.63.0
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling tempfile v3.5.0
[INFO] [stderr]    Compiling rusty-fork v0.3.0
[INFO] [stderr]    Compiling clap v3.2.23
[INFO] [stderr]    Compiling proptest v1.1.0
[INFO] [stderr]    Compiling serde-pickle v1.1.1
[INFO] [stderr]    Compiling bincode v1.3.3
[INFO] [stderr]    Compiling tskit v0.14.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 12.13s
[INFO] running `Command { std: "docker" "inspect" "83b661f7d79b705e4351c2f96028cbc6c41fbf22b1afd3750c04d31dc22e14ee", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "83b661f7d79b705e4351c2f96028cbc6c41fbf22b1afd3750c04d31dc22e14ee", kill_on_drop: false }`
[INFO] [stdout] 83b661f7d79b705e4351c2f96028cbc6c41fbf22b1afd3750c04d31dc22e14ee
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2023-12-22" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] c1af835fc342c5043612bc6128e1ebac04f4199ee1de113cf61f757d88e411e9
[INFO] running `Command { std: "docker" "start" "-a" "c1af835fc342c5043612bc6128e1ebac04f4199ee1de113cf61f757d88e411e9", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.06s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/tskit-9d946256cc149eb2)
[INFO] [stdout] 
[INFO] [stdout] running 88 tests
[INFO] [stdout] test _macros::test::test_handle_good_return_value ... ok
[INFO] [stdout] test _macros::test::test_handle_return_value_test_panic ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_avl_node_int_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__IO_FILE ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_edge_list_node_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_identity_segment_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_ls_hmm_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_kaitem_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_kastore_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout__tsk_table_sorter_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_argsort_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_avl_tree_int_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_blkalloc_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_bookmark_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_diff_iter_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_edge_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_edge_list_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_compressed_matrix_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_edge_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_individual_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_identity_segments_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_individual_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_ld_calc_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_migration_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_population_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_mutation_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_mutation_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_identity_segment_list_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_node_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_node_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_migration_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_provenance_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_recomb_required_record ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_provenance_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_population_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_reference_sequence_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_site_probability_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_site_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_value_transition_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_state_transition_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_site_table_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_table_collection_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_table_collection_t__bindgen_ty_1 ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_tree_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_transition_stack_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_treeseq_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_vargen_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_tree_t__bindgen_ty_1 ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_variant_t ... ok
[INFO] [stdout] test bindings::bindgen_test_layout_tsk_viterbi_matrix_t ... ok
[INFO] [stdout] test error::test::test_get_tskit_error_message ... ok
[INFO] [stdout] test flags::tests::node_is_not_sample ... ok
[INFO] [stdout] test error::test::test_error_formatting ... ok
[INFO] [stdout] test metadata::test_serde::test_metadata_round_trip_wrong_type ... ok
[INFO] [stdout] test error::test::test_extract_error_message ... ok
[INFO] [stdout] test metadata::tests::test_encoded_metadata_roundtrip ... ok
[INFO] [stdout] test metadata::tests::test_metadata_round_trip ... ok
[INFO] [stdout] test error::test::test_anyhow_compatability ... ok
[INFO] [stdout] test newtypes::test_f64_newtype_Display ... ok
[INFO] [stdout] test flags::tests::node_is_sample ... ok
[INFO] [stdout] test newtypes::test_usize_to_size_type ... ok
[INFO] [stdout] test metadata::test_serde::test_metadata_round_trip ... ok
[INFO] [stdout] test metadata::tests::test_vec8_cast_to_c_string ... ok
[INFO] [stdout] test metadata::test_serde::test_encoded_metadata_roundtrip ... ok
[INFO] [stdout] test sys::test_error_code ... ok
[INFO] [stdout] test node_table::test_owned_node_table::test_add_row ... ok
[INFO] [stdout] test sys::test_error_message ... ok
[INFO] [stdout] test tests::test_c_api_version ... ok
[INFO] [stdout] test test_tsk_variables::tests::test_node_is_sample ... ok
[INFO] [stdout] test table_views::table_views_tests::test_treeseq ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_no_roots ... ok
[INFO] [stdout] test trees::test_trees::test_array_lifetime ... ok
[INFO] [stdout] test trees::test_trees::test_create_treeseq_new_from_tables ... ok
[INFO] [stdout] test trees::test_trees::test_create_treeseq_from_tables ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_samples_two_trees ... ok
[INFO] [stdout] test trees::test_trees::test_reverse_tree_iteration ... ok
[INFO] [stdout] test trees::test_treeeseq_send_sync::build_arc ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_tree_seq_with_one_tree ... ok
[INFO] [stdout] test types::test::test_bookmark_mutability ... ok
[INFO] [stdout] test test_simplification::tests::test_simplify_treeseq ... ok
[INFO] [stdout] test trees::test_trees::test_samples_iterator_error_when_not_tracking_samples ... ok
[INFO] [stdout] test trees::test_trees::test_iterate_samples ... ok
[INFO] [stdout] test trees::test_trees::test_kc_distance_naive_test ... ok
[INFO] [stdout] test trees::test_trees::test_num_tracked_samples ... ok
[INFO] [stdout] test test_simplification::tests::test_simplify_tables ... ok
[INFO] [stdout] test trees::test_trees::test_dump_tables ... ok
[INFO] [stdout] test _macros::test::test_tskit_panic - should panic ... ok
[INFO] [stdout] test trees::test_trees::test_num_tracked_samples_not_tracking_sample_counts - should panic ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 88 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/book_metadata.rs (/opt/rustwide/target/debug/deps/book_metadata-13e3193026ce8772)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/book_table_collection.rs (/opt/rustwide/target/debug/deps/book_table_collection-48dd732d29be5cc4)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test add_node_handle_error ... ok
[INFO] [stdout] test add_node_without_metadata ... ok
[INFO] [stdout] test simple_table_collection_creation ... ok
[INFO] [stdout] test simple_table_collection_creation_with_newtype ... ok
[INFO] [stdout] test get_data_from_edge_table ... ok
[INFO] [stdout] test test_adding_node_table_row_with_defaults ... ok
[INFO] [stdout] test test_adding_node_table_row_with_defaults_and_metadata ... ok
[INFO] [stdout] test test_adding_node_table_row_with_defaults_and_metadata_requiring_clone ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/book_trees.rs (/opt/rustwide/target/debug/deps/book_trees-68ff26e5c9e5b349)
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test initialize_from_table_collection ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/example_flags.rs (/opt/rustwide/target/debug/deps/example_flags-8c4da09c7e47543e)
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test test_clip_invalid_flags ... ok
[INFO] [stdout] test test_example_node_flags ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/experimental.rs (/opt/rustwide/target/debug/deps/experimental-b60ba34893e78ebd)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/test_id_types.rs (/opt/rustwide/target/debug/deps/test_id_types-a47289513bb0ddcb)
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test test_node_id_as_usize ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/test_metadata.rs (/opt/rustwide/target/debug/deps/test_metadata-a8fb545a654ae1c0)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/test_tables.rs (/opt/rustwide/target/debug/deps/test_tables-bdc73f34b0467e8b)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_edge ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_population ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_node ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_mutation ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_site ... ok
[INFO] [stdout] test test_empty_table_collection ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_migration ... ok
[INFO] [stdout] test test_adding_rows_without_metadata::test_adding_individual ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests tskit
[INFO] [stdout] 
[INFO] [stdout] running 148 tests
[INFO] [stdout] test src/edge_table.rs - edge_table::OwningEdgeTable (line 327) ... ok
[INFO] [stdout] test src/bindings.rs - bindings (line 12) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::filter_populations (line 113) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions (line 37) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::filter_individuals (line 146) ... ok
[INFO] [stdout] test src/flags.rs - flags::NodeFlags (line 586) ... ok
[INFO] [stdout] test src/error.rs - error::get_tskit_error_message (line 86) ... ok
[INFO] [stdout] test src/flags.rs - flags::NodeFlags (line 577) ... ok
[INFO] [stdout] test src/error.rs - error::get_tskit_error_message (line 77) ... ok
[INFO] [stdout] test src/error.rs - error::panic_on_tskit_error (line 56) ... ok
[INFO] [stdout] test src/flags.rs - flags::IndividualTableSortOptions (line 327) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions (line 30) ... ok
[INFO] [stdout] test src/flags.rs - flags::NodeFlags (line 567) ... ok
[INFO] [stdout] test src/edge_table.rs - edge_table::OwningEdgeTable (line 312) ... ok
[INFO] [stdout] test src/error.rs - error::panic_on_tskit_error (line 65) ... ok
[INFO] [stdout] test src/error.rs - error::get_tskit_error_message (line 93) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::keep_input_roots (line 80) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::filter_sites (line 124) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 189) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 172) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::keep_unary_in_individuals (line 102) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::reduce_to_site_topology (line 135) ... ok
[INFO] [stdout] test src/flags.rs - flags::SimplificationOptions::keep_unary (line 91) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 220) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 167) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 160) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableClearOptions (line 177) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 237) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 227) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 232) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 242) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableEqualityOptions (line 252) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 461) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 475) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 470) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 485) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 505) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableOutputOptions (line 395) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 490) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 480) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 495) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeFlags (line 361) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableIntegrityCheckFlags (line 500) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableSortOptions (line 300) ... ok
[INFO] [stdout] test src/flags.rs - flags::TableSortOptions (line 291) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeFlags (line 347) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeFlags (line 356) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 221) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 233) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeSequenceFlags (line 423) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 302) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 283) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 256) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::IndividualTable::metadata (line 314) ... ok
[INFO] [stdout] test src/metadata.rs - metadata (line 76) ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::OwningIndividualTable (line 455) ... ok
[INFO] [stdout] test src/lib.rs - (line 35) ... ok
[INFO] [stdout] test src/metadata.rs - metadata (line 30) ... ok
[INFO] [stdout] test src/flags.rs - flags::TreeSequenceFlags (line 432) ... ok
[INFO] [stdout] test src/migration_table.rs - migration_table::OwningMigrationTable (line 386) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaultsWithMetadataNotCloneNotDebug (line 376) - compile fail ... ok
[INFO] [stdout] test src/individual_table.rs - individual_table::OwningIndividualTable (line 442) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaultsWithMetadataNotCloneNotDebug (line 412) - compile fail ... ok
[INFO] [stdout] test src/migration_table.rs - migration_table::OwningMigrationTable (line 374) ... ok
[INFO] [stdout] test src/mutation_table.rs - mutation_table::OwningMutationTable (line 362) ... ok
[INFO] [stdout] test src/mutation_table.rs - mutation_table::OwningMutationTable (line 350) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::SizeType (line 147) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::NodeId (line 16) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::NodeId (line 56) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaults (line 245) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::NodeId (line 40) ... ok
[INFO] [stdout] test src/newtypes.rs - newtypes::Time (line 288) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::time_slice_mut (line 745) - compile fail ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeDefaults (line 255) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags (line 543) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 786) ... ok
[INFO] [stdout] test src/metadata.rs - metadata (line 103) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 797) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::individual (line 620) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 822) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 811) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::flags_slice_mut (line 835) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::OwningNodeTable (line 892) ... ok
[INFO] [stdout] test src/population_table.rs - population_table::OwningPopulationTable (line 225) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::OwningNodeTable::add_row_with_defaults (line 974) ... ok
[INFO] [stdout] test src/site_table.rs - site_table::OwningSiteTable (line 277) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::time_slice_mut (line 755) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::population (line 577) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::OwningNodeTable (line 880) ... ok
[INFO] [stdout] test src/site_table.rs - site_table::OwningSiteTable (line 265) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection (line 33) ... ok
[INFO] [stdout] test src/population_table.rs - population_table::OwningPopulationTable (line 213) ... ok
[INFO] [stdout] test src/node_table.rs - node_table::NodeTable::time (line 518) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge_with_metadata (line 272) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge (line 223) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual_with_metadata (line 334) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge (line 237) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_migration_with_metadata (line 378) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual (line 293) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_edge (line 251) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual (line 303) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_node_with_metadata (line 451) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_mutation_with_metadata (line 529) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_population_with_metadata (line 564) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_migration (line 360) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_site_with_metadata (line 500) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_individual (line 314) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_node_with_defaults (line 425) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::add_population (line 549) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::check_integrity (line 882) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::check_integrity (line 889) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::check_integrity (line 896) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::new (line 86) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::create_node_id_vector (line 1294) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::sequence_length (line 211) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::new (line 92) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_sib_array (line 229) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_child_array (line 269) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_sample_array (line 169) - compile fail ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_individuals (line 1119) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::new_from_file (line 165) ... FAILED
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_migrations (line 1161) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_nodes (line 1007) ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_edges (line 970) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::next_sample_array (line 132) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_child_array (line 289) - compile fail ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_mutations (line 1080) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_sample_array (line 206) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_sib_array (line 249) - compile fail ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::samples_array (line 93) - compile fail ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_sites (line 1044) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::parent_array (line 59) - compile fail ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::set_populations (line 1200) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::tree_iterator (line 348) - compile fail ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::tree_iterator (line 364) - compile ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence (line 178) - compile fail ... ok
[INFO] [stdout] test src/table_collection.rs - table_collection::TableCollection::topological_sort_individuals (line 685) ... ok
[INFO] [stdout] test src/table_views.rs - table_views::TableViews::create_node_id_vector (line 206) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::left_sample_array (line 155) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::new (line 227) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::right_sample_array (line 192) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::samples_array (line 79) ... ok
[INFO] [stdout] test src/tree_interface.rs - tree_interface::TreeInterface::next_sample_array (line 118) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence (line 159) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::tree_iterator (line 328) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::new (line 235) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::new (line 218) ... ok
[INFO] [stdout] test src/trees.rs - trees::TreeSequence::create_node_id_vector (line 551) ... ok
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- src/table_collection.rs - table_collection::TableCollection::new_from_file (line 165) stdout ----
[INFO] [stdout] Test executable failed (exit status: 101).
[INFO] [stdout] 
[INFO] [stdout] stderr:
[INFO] [stdout] thread 'main' panicked at src/table_collection.rs:6:71:
[INFO] [stdout] called `Result::unwrap()` on an `Err` value: ErrorCode { code: -3 }
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x55f76dd78ef6 - std::backtrace_rs::backtrace::libunwind::trace::h261606ad26a499c1
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/../../backtrace/src/backtrace/libunwind.rs:104:5
[INFO] [stdout]    1:     0x55f76dd78ef6 - std::backtrace_rs::backtrace::trace_unsynchronized::hd183f0625477fb28
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stdout]    2:     0x55f76dd78ef6 - std::sys_common::backtrace::_print_fmt::hd7f8fef21b4eda67
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/sys_common/backtrace.rs:68:5
[INFO] [stdout]    3:     0x55f76dd78ef6 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::h623d9b51f2f453f1
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/sys_common/backtrace.rs:44:22
[INFO] [stdout]    4:     0x55f76dd9b6c0 - core::fmt::rt::Argument::fmt::h9f417ac76a86f368
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/core/src/fmt/rt.rs:142:9
[INFO] [stdout]    5:     0x55f76dd9b6c0 - core::fmt::write::hc9b6faf4ac2aeff7
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/core/src/fmt/mod.rs:1120:17
[INFO] [stdout]    6:     0x55f76dd773af - std::io::Write::write_fmt::hfead1eee52c2e65e
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/io/mod.rs:1810:15
[INFO] [stdout]    7:     0x55f76dd78cd4 - std::sys_common::backtrace::_print::hd5d66399c7df88a2
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/sys_common/backtrace.rs:47:5
[INFO] [stdout]    8:     0x55f76dd78cd4 - std::sys_common::backtrace::print::he81ed2da642d37e5
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/sys_common/backtrace.rs:34:9
[INFO] [stdout]    9:     0x55f76dd7a237 - std::panicking::default_hook::{{closure}}::h85773f4fa117163d
[INFO] [stdout]   10:     0x55f76dd79f99 - std::panicking::default_hook::h6a1694a91d09b278
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/panicking.rs:292:9
[INFO] [stdout]   11:     0x55f76dd7a6c8 - std::panicking::rust_panic_with_hook::h0a7ad96e90f7145b
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/panicking.rs:779:13
[INFO] [stdout]   12:     0x55f76dd7a5a2 - std::panicking::begin_panic_handler::{{closure}}::h7919090525c6485e
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/panicking.rs:657:13
[INFO] [stdout]   13:     0x55f76dd793f6 - std::sys_common::backtrace::__rust_end_short_backtrace::hf3289479464f7dfe
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/sys_common/backtrace.rs:171:18
[INFO] [stdout]   14:     0x55f76dd7a300 - rust_begin_unwind
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/panicking.rs:645:5
[INFO] [stdout]   15:     0x55f76dd46fe5 - core::panicking::panic_fmt::hcc9f77c5c132af55
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/core/src/panicking.rs:72:14
[INFO] [stdout]   16:     0x55f76dd47583 - core::result::unwrap_failed::hbe14f498be1452f9
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/core/src/result.rs:1649:5
[INFO] [stdout]   17:     0x55f76dd489bb - core::result::Result<T,E>::unwrap::h78afb77596c18d83
[INFO] [stdout]   18:     0x55f76dd4b95c - rust_out::main::_doctest_main_src_table_collection_rs_165_0::h3b8671024292e9d0
[INFO] [stdout]   19:     0x55f76dd4b8a6 - rust_out::main::h71185a25be64b52e
[INFO] [stdout]   20:     0x55f76dd482d3 - core::ops::function::FnOnce::call_once::h0a5e8bc522cf7e26
[INFO] [stdout]   21:     0x55f76dd47ab6 - std::sys_common::backtrace::__rust_begin_short_backtrace::h904992c6a2208b49
[INFO] [stdout]   22:     0x55f76dd47f79 - std::rt::lang_start::{{closure}}::h95a4dad7805b7c7c
[INFO] [stdout]   23:     0x55f76dd74f11 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::h4eb4c5e1620f29b0
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/core/src/ops/function.rs:284:13
[INFO] [stdout]   24:     0x55f76dd74f11 - std::panicking::try::do_call::h73fd26535faffcdf
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/panicking.rs:552:40
[INFO] [stdout]   25:     0x55f76dd74f11 - std::panicking::try::h77ff1d98f0fb9f39
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/panicking.rs:516:19
[INFO] [stdout]   26:     0x55f76dd74f11 - std::panic::catch_unwind::hab3caf2448b95e37
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/panic.rs:142:14
[INFO] [stdout]   27:     0x55f76dd74f11 - std::rt::lang_start_internal::{{closure}}::h8086711f9c783f78
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/rt.rs:148:48
[INFO] [stdout]   28:     0x55f76dd74f11 - std::panicking::try::do_call::hf920d4dc291cd6ca
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/panicking.rs:552:40
[INFO] [stdout]   29:     0x55f76dd74f11 - std::panicking::try::h2b806ccc0a85db74
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/panicking.rs:516:19
[INFO] [stdout]   30:     0x55f76dd74f11 - std::panic::catch_unwind::h038489539c507df2
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/panic.rs:142:14
[INFO] [stdout]   31:     0x55f76dd74f11 - std::rt::lang_start_internal::h28503b88912e8a5c
[INFO] [stdout]                                at /rustc/0e09125c6c3c2fd70d7de961bcf0e51575235fad/library/std/src/rt.rs:148:20
[INFO] [stdout]   32:     0x55f76dd47f57 - std::rt::lang_start::h9942cc54b4d5350a
[INFO] [stdout]   33:     0x55f76dd4bd35 - main
[INFO] [stdout]   34:     0x7f00ec3fad90 - <unknown>
[INFO] [stdout]   35:     0x7f00ec3fae40 - __libc_start_main
[INFO] [stdout]   36:     0x55f76dd47845 - _start
[INFO] [stdout]   37:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     src/table_collection.rs - table_collection::TableCollection::new_from_file (line 165)
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 147 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 3.05s
[INFO] [stdout] 
[INFO] [stderr] error: doctest failed, to rerun pass `--doc`
[INFO] running `Command { std: "docker" "inspect" "c1af835fc342c5043612bc6128e1ebac04f4199ee1de113cf61f757d88e411e9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c1af835fc342c5043612bc6128e1ebac04f4199ee1de113cf61f757d88e411e9", kill_on_drop: false }`
[INFO] [stdout] c1af835fc342c5043612bc6128e1ebac04f4199ee1de113cf61f757d88e411e9
