[INFO] cloning repository https://github.com/chfi/rust-qtlreaper
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/chfi/rust-qtlreaper" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 8d650921ec4aec63c42068de58b91579228f57b1
[INFO] testing chfi/rust-qtlreaper against 1.75.0 for beta-1.76-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/chfi/rust-qtlreaper on toolchain 1.75.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/chfi/rust-qtlreaper
[INFO] finished tweaking git repo https://github.com/chfi/rust-qtlreaper
[INFO] tweaked toml for git repo https://github.com/chfi/rust-qtlreaper written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/chfi/rust-qtlreaper already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 5c30f26c439426675d2439f25aa34cbb16bb96ed850c451e58974e08ccff3ec4
[INFO] running `Command { std: "docker" "start" "-a" "5c30f26c439426675d2439f25aa34cbb16bb96ed850c451e58974e08ccff3ec4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "5c30f26c439426675d2439f25aa34cbb16bb96ed850c451e58974e08ccff3ec4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5c30f26c439426675d2439f25aa34cbb16bb96ed850c451e58974e08ccff3ec4", kill_on_drop: false }`
[INFO] [stdout] 5c30f26c439426675d2439f25aa34cbb16bb96ed850c451e58974e08ccff3ec4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 1456cd7cff5e64b21cc45c2521e400ff08e43431ec4a514f50b9756d0a735814
[INFO] running `Command { std: "docker" "start" "-a" "1456cd7cff5e64b21cc45c2521e400ff08e43431ec4a514f50b9756d0a735814", kill_on_drop: false }`
[INFO] [stderr]    Compiling autocfg v0.1.6
[INFO] [stderr]    Compiling libc v0.2.54
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]    Compiling rand_core v0.4.0
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]    Compiling syn v0.15.34
[INFO] [stderr]    Compiling arrayvec v0.4.10
[INFO] [stderr]    Compiling cfg-if v0.1.9
[INFO] [stderr]    Compiling nodrop v0.1.13
[INFO] [stderr]    Compiling rayon-core v1.4.1
[INFO] [stderr]    Compiling lazy_static v1.3.0
[INFO] [stderr]    Compiling memoffset v0.2.1
[INFO] [stderr]    Compiling scopeguard v0.3.3
[INFO] [stderr]    Compiling unicode-segmentation v1.3.0
[INFO] [stderr]    Compiling ryu v0.2.8
[INFO] [stderr]    Compiling either v1.5.2
[INFO] [stderr]    Compiling crossbeam-utils v0.2.2
[INFO] [stderr]    Compiling serde v1.0.91
[INFO] [stderr]    Compiling matrixmultiply v0.1.15
[INFO] [stderr]    Compiling unicode-width v0.1.5
[INFO] [stderr]    Compiling rawpointer v0.1.0
[INFO] [stderr]    Compiling rand_core v0.3.1
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling ansi_term v0.11.0
[INFO] [stderr]    Compiling bitflags v1.0.4
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling vec_map v0.8.1
[INFO] [stderr]    Compiling ndarray v0.12.1
[INFO] [stderr]    Compiling rayon v1.0.3
[INFO] [stderr]    Compiling rand_hc v0.1.0
[INFO] [stderr]    Compiling rand_xorshift v0.1.1
[INFO] [stderr]    Compiling rand_isaac v0.1.1
[INFO] [stderr]    Compiling num-traits v0.2.8
[INFO] [stderr]    Compiling rand_chacha v0.1.1
[INFO] [stderr]    Compiling num-complex v0.2.3
[INFO] [stderr]    Compiling rand_pcg v0.1.2
[INFO] [stderr]    Compiling rand v0.6.5
[INFO] [stderr]    Compiling heck v0.3.1
[INFO] [stderr]    Compiling itertools v0.7.11
[INFO] [stderr]    Compiling rand_jitter v0.1.4
[INFO] [stderr]    Compiling itoa v0.4.4
[INFO] [stderr]    Compiling crossbeam-epoch v0.3.1
[INFO] [stderr]    Compiling crossbeam-deque v0.2.0
[INFO] [stderr]    Compiling quote v0.6.12
[INFO] [stderr]    Compiling num_cpus v1.10.0
[INFO] [stderr]    Compiling atty v0.2.11
[INFO] [stderr]    Compiling rand_os v0.1.3
[INFO] [stderr]    Compiling clap v2.33.0
[INFO] [stderr]    Compiling serde_derive v1.0.91
[INFO] [stderr]    Compiling structopt-derive v0.2.15
[INFO] [stderr]    Compiling structopt v0.2.15
[INFO] [stderr]    Compiling serde_json v1.0.39
[INFO] [stderr]    Compiling qtlreaper v0.1.4 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused `#[macro_use]` import
[INFO] [stdout]  --> src/lib.rs:5:22
[INFO] [stdout]   |
[INFO] [stdout] 5 | #[macro_use(s, azip, array)]
[INFO] [stdout]   |                      ^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `PERMUTATION_TESTSIZE` is never used
[INFO] [stdout]  --> src/regression.rs:5:7
[INFO] [stdout]   |
[INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000;
[INFO] [stdout]   |       ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `regression_2n_variance` is never used
[INFO] [stdout]    --> src/regression.rs:250:4
[INFO] [stdout]     |
[INFO] [stdout] 250 | fn regression_2n_variance(
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `n_bootstrap` is never read
[INFO] [stdout]   --> src/main.rs:67:5
[INFO] [stdout]    |
[INFO] [stdout] 15 | struct Opt {
[INFO] [stdout]    |        --- field in this struct
[INFO] [stdout] ...
[INFO] [stdout] 67 |     n_bootstrap: usize,
[INFO] [stdout]    |     ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Opt` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 14.10s
[INFO] running `Command { std: "docker" "inspect" "1456cd7cff5e64b21cc45c2521e400ff08e43431ec4a514f50b9756d0a735814", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1456cd7cff5e64b21cc45c2521e400ff08e43431ec4a514f50b9756d0a735814", kill_on_drop: false }`
[INFO] [stdout] 1456cd7cff5e64b21cc45c2521e400ff08e43431ec4a514f50b9756d0a735814
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e20fd55db62ac9cb1be99b1915776bdd482fbb99e512d334006a9d01347ab881
[INFO] running `Command { std: "docker" "start" "-a" "e20fd55db62ac9cb1be99b1915776bdd482fbb99e512d334006a9d01347ab881", kill_on_drop: false }`
[INFO] [stdout] warning: unused `#[macro_use]` import
[INFO] [stdout]  --> src/lib.rs:5:22
[INFO] [stdout]   |
[INFO] [stdout] 5 | #[macro_use(s, azip, array)]
[INFO] [stdout]   |                      ^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `PERMUTATION_TESTSIZE` is never used
[INFO] [stdout]  --> src/regression.rs:5:7
[INFO] [stdout]   |
[INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000;
[INFO] [stdout]   |       ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `regression_2n_variance` is never used
[INFO] [stdout]    --> src/regression.rs:250:4
[INFO] [stdout]     |
[INFO] [stdout] 250 | fn regression_2n_variance(
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling qtlreaper v0.1.4 (/opt/rustwide/workdir)
[INFO] [stdout] warning: field `n_bootstrap` is never read
[INFO] [stdout]   --> src/main.rs:67:5
[INFO] [stdout]    |
[INFO] [stdout] 15 | struct Opt {
[INFO] [stdout]    |        --- field in this struct
[INFO] [stdout] ...
[INFO] [stdout] 67 |     n_bootstrap: usize,
[INFO] [stdout]    |     ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Opt` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `PERMUTATION_TESTSIZE` is never used
[INFO] [stdout]  --> src/regression.rs:5:7
[INFO] [stdout]   |
[INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000;
[INFO] [stdout]   |       ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `regression_2n_variance` is never used
[INFO] [stdout]    --> src/regression.rs:250:4
[INFO] [stdout]     |
[INFO] [stdout] 250 | fn regression_2n_variance(
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.88s
[INFO] running `Command { std: "docker" "inspect" "e20fd55db62ac9cb1be99b1915776bdd482fbb99e512d334006a9d01347ab881", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e20fd55db62ac9cb1be99b1915776bdd482fbb99e512d334006a9d01347ab881", kill_on_drop: false }`
[INFO] [stdout] e20fd55db62ac9cb1be99b1915776bdd482fbb99e512d334006a9d01347ab881
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 082803b18b2159a21aa6c4b517fe6f490d7db20887ac727fcf4365cdb06aa72e
[INFO] running `Command { std: "docker" "start" "-a" "082803b18b2159a21aa6c4b517fe6f490d7db20887ac727fcf4365cdb06aa72e", kill_on_drop: false }`
[INFO] [stderr] warning: unused `#[macro_use]` import
[INFO] [stderr]  --> src/lib.rs:5:22
[INFO] [stderr]   |
[INFO] [stderr] 5 | #[macro_use(s, azip, array)]
[INFO] [stderr]   |                      ^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: constant `PERMUTATION_TESTSIZE` is never used
[INFO] [stderr]  --> src/regression.rs:5:7
[INFO] [stderr]   |
[INFO] [stderr] 5 | const PERMUTATION_TESTSIZE: usize = 1000;
[INFO] [stderr]   |       ^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: function `regression_2n_variance` is never used
[INFO] [stderr]    --> src/regression.rs:250:4
[INFO] [stderr]     |
[INFO] [stderr] 250 | fn regression_2n_variance(
[INFO] [stderr]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: `qtlreaper` (lib) generated 3 warnings
[INFO] [stderr] warning: `qtlreaper` (lib test) generated 2 warnings (2 duplicates)
[INFO] [stderr] warning: field `n_bootstrap` is never read
[INFO] [stderr]   --> src/main.rs:67:5
[INFO] [stderr]    |
[INFO] [stderr] 15 | struct Opt {
[INFO] [stderr]    |        --- field in this struct
[INFO] [stderr] ...
[INFO] [stderr] 67 |     n_bootstrap: usize,
[INFO] [stderr]    |     ^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `Opt` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stderr]    = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: `qtlreaper` (bin "qtlreaper" test) generated 1 warning
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.06s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/qtlreaper-d5ec9d2186120f19)
[INFO] [stdout] 
[INFO] [stdout] running 3 tests
[INFO] [stdout] test geneobject::tests::it_can_parse_header ... ok
[INFO] [stdout] test geneobject::tests::it_can_parse_metadata ... ok
[INFO] [stdout] test geneobject::tests::it_can_estimate_unknown_genotypes ... FAILED
[INFO] [stderr] error: test failed, to rerun pass `--lib`
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- geneobject::tests::it_can_estimate_unknown_genotypes stdout ----
[INFO] [stdout] thread 'geneobject::tests::it_can_estimate_unknown_genotypes' panicked at src/geneobject.rs:895:9:
[INFO] [stdout] assertion `left == right` failed
[INFO] [stdout]   left: [Locus { dominance: None, genotype: [Mat, Mat, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-1.0, -1.0, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk1", centi_morgan: 10.0, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Pat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-0.18523506128077272, 1.0, 0.9616255554798838] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk2", centi_morgan: 30.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.18906668494617707, 0.3421367343627406, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk3", centi_morgan: 40.1, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.5826065314914579, -0.32233300305265566, 0.3223330030526552] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk4", centi_morgan: 50.2, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -0.34213673436274084] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk5", centi_morgan: 60.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Mat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk6", centi_morgan: 70.1, mega_basepair: None, chromosome: "1" } }]
[INFO] [stdout]  right: [Locus { dominance: None, genotype: [Mat, Mat, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-1.0, -1.0, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk1", centi_morgan: 10.0, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Pat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-0.18523506128077272, 1.0, 0.9616255554798838] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk2", centi_morgan: 30.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.18906668494617707, 0.3421367343627405, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk3", centi_morgan: 40.1, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.5826065314914579, -0.3223330030526561, 0.3223330030526552] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk4", centi_morgan: 50.2, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -0.34213673436274084] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk5", centi_morgan: 60.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Mat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk6", centi_morgan: 70.1, mega_basepair: None, chromosome: "1" } }]
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x5581003249cc - std::backtrace_rs::backtrace::libunwind::trace::ha637c64ce894333a
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/../../backtrace/src/backtrace/libunwind.rs:104:5
[INFO] [stdout]    1:     0x5581003249cc - std::backtrace_rs::backtrace::trace_unsynchronized::h47f62dea28e0c88d
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stdout]    2:     0x5581003249cc - std::sys_common::backtrace::_print_fmt::h9eef0abe20ede486
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/sys_common/backtrace.rs:67:5
[INFO] [stdout]    3:     0x5581003249cc - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::hed7f999df88cc644
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/sys_common/backtrace.rs:44:22
[INFO] [stdout]    4:     0x55810034e920 - core::fmt::rt::Argument::fmt::h1539a9308b8d058d
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/fmt/rt.rs:142:9
[INFO] [stdout]    5:     0x55810034e920 - core::fmt::write::h3a39390d8560d9c9
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/fmt/mod.rs:1120:17
[INFO] [stdout]    6:     0x55810032237f - std::io::Write::write_fmt::h040b369f3a0f9cbc
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/io/mod.rs:1762:15
[INFO] [stdout]    7:     0x5581003247b4 - std::sys_common::backtrace::_print::h894006fb5c6f3d45
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/sys_common/backtrace.rs:47:5
[INFO] [stdout]    8:     0x5581003247b4 - std::sys_common::backtrace::print::h23a2d212c6fff936
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/sys_common/backtrace.rs:34:9
[INFO] [stdout]    9:     0x558100326477 - std::panicking::default_hook::{{closure}}::h8a1d2ee00185001a
[INFO] [stdout]   10:     0x558100326163 - std::panicking::default_hook::h6038f2eba384e475
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:289:9
[INFO] [stdout]   11:     0x5581002eb477 - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::h0ad024c9bdc6d768
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/alloc/src/boxed.rs:2021:9
[INFO] [stdout]   12:     0x5581002eb477 - test::test_main::{{closure}}::h7500b54257359db6
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/test/src/lib.rs:138:21
[INFO] [stdout]   13:     0x558100326a88 - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::h1f8f335eaa9cfaee
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/alloc/src/boxed.rs:2021:9
[INFO] [stdout]   14:     0x558100326a88 - std::panicking::rust_panic_with_hook::h2b5517d590cab22e
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:783:13
[INFO] [stdout]   15:     0x5581003267de - std::panicking::begin_panic_handler::{{closure}}::h233112c06e0ef43e
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:657:13
[INFO] [stdout]   16:     0x558100324e96 - std::sys_common::backtrace::__rust_end_short_backtrace::h6e893f24d7ebbff8
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/sys_common/backtrace.rs:170:18
[INFO] [stdout]   17:     0x558100326542 - rust_begin_unwind
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:645:5
[INFO] [stdout]   18:     0x558100290cf5 - core::panicking::panic_fmt::hbf0e066aabfa482c
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/panicking.rs:72:14
[INFO] [stdout]   19:     0x55810029114b - core::panicking::assert_failed_inner::h0bba8b7c26ee4492
[INFO] [stdout]   20:     0x5581002b457e - core::panicking::assert_failed::h9e26906a94fcfacd
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/panicking.rs:279:5
[INFO] [stdout]   21:     0x5581002ab6a7 - qtlreaper::geneobject::tests::it_can_estimate_unknown_genotypes::h7939a6b8cea0a1ad
[INFO] [stdout]                                at /opt/rustwide/workdir/src/geneobject.rs:895:9
[INFO] [stdout]   22:     0x5581002a8af7 - qtlreaper::geneobject::tests::it_can_estimate_unknown_genotypes::{{closure}}::h439f37dd33eae307
[INFO] [stdout]                                at /opt/rustwide/workdir/src/geneobject.rs:808:43
[INFO] [stdout]   23:     0x5581002ac6b6 - core::ops::function::FnOnce::call_once::h21c13afa061a107d
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   24:     0x5581002f0acf - core::ops::function::FnOnce::call_once::h2b5d431d5046312d
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   25:     0x5581002f0acf - test::__rust_begin_short_backtrace::h7714669af176e207
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/test/src/lib.rs:628:18
[INFO] [stdout]   26:     0x5581002efae5 - test::run_test_in_process::{{closure}}::h85218797dcbcec12
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/test/src/lib.rs:651:60
[INFO] [stdout]   27:     0x5581002efae5 - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::h76c106ea31c14d7b
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/panic/unwind_safe.rs:272:9
[INFO] [stdout]   28:     0x5581002efae5 - std::panicking::try::do_call::h3bd5d0f6620ee946
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:552:40
[INFO] [stdout]   29:     0x5581002efae5 - std::panicking::try::h232e535e4744fe31
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:516:19
[INFO] [stdout]   30:     0x5581002efae5 - std::panic::catch_unwind::h3ce3bd6ca8dbac68
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panic.rs:142:14
[INFO] [stdout]   31:     0x5581002efae5 - test::run_test_in_process::hc97b257c9621286a
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/test/src/lib.rs:651:27
[INFO] [stdout]   32:     0x5581002efae5 - test::run_test::{{closure}}::h2aa798823a438d38
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/test/src/lib.rs:574:43
[INFO] [stdout]   33:     0x5581002b7da6 - test::run_test::{{closure}}::h87d231c78fb59832
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/test/src/lib.rs:602:41
[INFO] [stdout]   34:     0x5581002b7da6 - std::sys_common::backtrace::__rust_begin_short_backtrace::he6df152596625789
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/sys_common/backtrace.rs:154:18
[INFO] [stdout]   35:     0x5581002bce57 - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::ha94be15d1e0acf36
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/thread/mod.rs:529:17
[INFO] [stdout]   36:     0x5581002bce57 - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::h9dc6bd6372f16606
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/panic/unwind_safe.rs:272:9
[INFO] [stdout]   37:     0x5581002bce57 - std::panicking::try::do_call::h9057517f80303cd4
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:552:40
[INFO] [stdout]   38:     0x5581002bce57 - std::panicking::try::he3a30b11ee45340c
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panicking.rs:516:19
[INFO] [stdout]   39:     0x5581002bce57 - std::panic::catch_unwind::h410458cfd3528b8b
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/panic.rs:142:14
[INFO] [stdout]   40:     0x5581002bce57 - std::thread::Builder::spawn_unchecked_::{{closure}}::h72ac3bdb567b737b
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/thread/mod.rs:528:30
[INFO] [stdout]   41:     0x5581002bce57 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h38f34da3654a8344
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   42:     0x55810032b515 - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::hc7eafaff61e32df9
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/alloc/src/boxed.rs:2007:9
[INFO] [stdout]   43:     0x55810032b515 - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::h6ba4a5de48dd2304
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/alloc/src/boxed.rs:2007:9
[INFO] [stdout]   44:     0x55810032b515 - std::sys::unix::thread::Thread::new::thread_start::he469335aef763e45
[INFO] [stdout]                                at /rustc/82e1608dfa6e0b5569232559e3d385fea5a93112/library/std/src/sys/unix/thread.rs:108:17
[INFO] [stdout]   45:     0x7f8944badac3 - <unknown>
[INFO] [stdout]   46:     0x7f8944c3ebf4 - __clone
[INFO] [stdout]   47:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     geneobject::tests::it_can_estimate_unknown_genotypes
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 2 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.05s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "082803b18b2159a21aa6c4b517fe6f490d7db20887ac727fcf4365cdb06aa72e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "082803b18b2159a21aa6c4b517fe6f490d7db20887ac727fcf4365cdb06aa72e", kill_on_drop: false }`
[INFO] [stdout] 082803b18b2159a21aa6c4b517fe6f490d7db20887ac727fcf4365cdb06aa72e
