[INFO] cloning repository https://github.com/zietzm/igwas
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/zietzm/igwas" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzietzm%2Figwas", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzietzm%2Figwas'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] da169d609141748abe192eee6d746f2c72b0a7e3
[INFO] testing zietzm/igwas against 1.75.0 for beta-1.76-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzietzm%2Figwas" "/workspace/builds/worker-4-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/zietzm/igwas on toolchain 1.75.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/zietzm/igwas
[INFO] finished tweaking git repo https://github.com/zietzm/igwas
[INFO] tweaked toml for git repo https://github.com/zietzm/igwas written to /workspace/builds/worker-4-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/zietzm/igwas already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.75.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] c87d8bf3925ac3d15647fa7e4e48fc3b073b58454c94eb5b215f2e6eae45de29
[INFO] running `Command { std: "docker" "start" "-a" "c87d8bf3925ac3d15647fa7e4e48fc3b073b58454c94eb5b215f2e6eae45de29", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "c87d8bf3925ac3d15647fa7e4e48fc3b073b58454c94eb5b215f2e6eae45de29", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c87d8bf3925ac3d15647fa7e4e48fc3b073b58454c94eb5b215f2e6eae45de29", kill_on_drop: false }`
[INFO] [stdout] c87d8bf3925ac3d15647fa7e4e48fc3b073b58454c94eb5b215f2e6eae45de29
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] dcfe0c0ede3b653dfb45808bd6d6bef613fee9600d6f61ee2b64be59232925d1
[INFO] running `Command { std: "docker" "start" "-a" "dcfe0c0ede3b653dfb45808bd6d6bef613fee9600d6f61ee2b64be59232925d1", kill_on_drop: false }`
[INFO] [stderr]    Compiling autocfg v1.1.0
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling proc-macro2 v1.0.70
[INFO] [stderr]    Compiling unicode-ident v1.0.12
[INFO] [stderr]    Compiling libc v0.2.150
[INFO] [stderr]    Compiling paste v1.0.14
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling bytemuck v1.14.0
[INFO] [stderr]    Compiling crossbeam-utils v0.8.16
[INFO] [stderr]    Compiling memchr v2.6.4
[INFO] [stderr]    Compiling ppv-lite86 v0.2.17
[INFO] [stderr]    Compiling typenum v1.17.0
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling rustix v0.38.26
[INFO] [stderr]    Compiling utf8parse v0.2.1
[INFO] [stderr]    Compiling scopeguard v1.2.0
[INFO] [stderr]    Compiling anstyle-parse v0.2.2
[INFO] [stderr]    Compiling rayon-core v1.12.0
[INFO] [stderr]    Compiling serde v1.0.193
[INFO] [stderr]    Compiling regex-syntax v0.8.2
[INFO] [stderr]    Compiling safe_arch v0.7.1
[INFO] [stderr]    Compiling bitflags v2.4.1
[INFO] [stderr]    Compiling anstyle v1.0.4
[INFO] [stderr]    Compiling num-traits v0.2.17
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling memoffset v0.9.0
[INFO] [stderr]    Compiling num-rational v0.4.1
[INFO] [stderr]    Compiling matrixmultiply v0.3.8
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.15
[INFO] [stderr]    Compiling wide v0.7.13
[INFO] [stderr]    Compiling aho-corasick v1.1.2
[INFO] [stderr]    Compiling linux-raw-sys v0.4.12
[INFO] [stderr]    Compiling colorchoice v1.0.0
[INFO] [stderr]    Compiling anstyle-query v1.0.0
[INFO] [stderr]    Compiling anstream v0.6.4
[INFO] [stderr]    Compiling quote v1.0.33
[INFO] [stderr]    Compiling getrandom v0.2.11
[INFO] [stderr]    Compiling syn v2.0.39
[INFO] [stderr]    Compiling anyhow v1.0.75
[INFO] [stderr]    Compiling crossbeam-deque v0.8.3
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling clap_lex v0.6.0
[INFO] [stderr]    Compiling strsim v0.10.0
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling clap_builder v4.4.9
[INFO] [stderr]    Compiling csv-core v0.1.11
[INFO] [stderr]    Compiling ryu v1.0.15
[INFO] [stderr]    Compiling humantime v2.1.0
[INFO] [stderr]    Compiling either v1.9.0
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling regex-automata v0.4.3
[INFO] [stderr]    Compiling itoa v1.0.9
[INFO] [stderr]    Compiling termcolor v1.4.0
[INFO] [stderr]    Compiling log v0.4.20
[INFO] [stderr]    Compiling is-terminal v0.4.9
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling num-complex v0.4.4
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling rayon v1.8.0
[INFO] [stderr]    Compiling simba v0.6.0
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling simba v0.8.1
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling nalgebra-macros v0.2.1
[INFO] [stderr]    Compiling regex v1.10.2
[INFO] [stderr]    Compiling clap_derive v4.4.7
[INFO] [stderr]    Compiling csv v1.3.0
[INFO] [stderr]    Compiling env_logger v0.10.1
[INFO] [stderr]    Compiling clap v4.4.10
[INFO] [stderr]    Compiling nalgebra v0.29.0
[INFO] [stderr]    Compiling nalgebra v0.32.3
[INFO] [stderr]    Compiling statrs v0.16.0
[INFO] [stderr]    Compiling igwas v1.0.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 24.05s
[INFO] running `Command { std: "docker" "inspect" "dcfe0c0ede3b653dfb45808bd6d6bef613fee9600d6f61ee2b64be59232925d1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "dcfe0c0ede3b653dfb45808bd6d6bef613fee9600d6f61ee2b64be59232925d1", kill_on_drop: false }`
[INFO] [stdout] dcfe0c0ede3b653dfb45808bd6d6bef613fee9600d6f61ee2b64be59232925d1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 6bf53ab8e73aa974615986997e310613cd0d3a3559a005a63b45fd8d3c31a9b5
[INFO] running `Command { std: "docker" "start" "-a" "6bf53ab8e73aa974615986997e310613cd0d3a3559a005a63b45fd8d3c31a9b5", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.150
[INFO] [stderr]    Compiling either v1.9.0
[INFO] [stderr]    Compiling rustix v0.38.26
[INFO] [stderr]    Compiling regex-automata v0.4.3
[INFO] [stderr]    Compiling serde v1.0.193
[INFO] [stderr]    Compiling serde_derive v1.0.193
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling predicates-core v1.0.6
[INFO] [stderr]    Compiling termtree v0.4.1
[INFO] [stderr]    Compiling difflib v0.4.0
[INFO] [stderr]    Compiling fastrand v2.0.1
[INFO] [stderr]    Compiling rayon v1.8.0
[INFO] [stderr]    Compiling itertools v0.11.0
[INFO] [stderr]    Compiling predicates-tree v1.0.9
[INFO] [stderr]    Compiling getrandom v0.2.11
[INFO] [stderr]    Compiling wait-timeout v0.2.0
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling predicates v3.0.4
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling nalgebra v0.29.0
[INFO] [stderr]    Compiling nalgebra v0.32.3
[INFO] [stderr]    Compiling is-terminal v0.4.9
[INFO] [stderr]    Compiling tempfile v3.8.1
[INFO] [stderr]    Compiling regex v1.10.2
[INFO] [stderr]    Compiling bstr v1.8.0
[INFO] [stderr]    Compiling env_logger v0.10.1
[INFO] [stderr]    Compiling assert_cmd v2.0.12
[INFO] [stderr]    Compiling csv v1.3.0
[INFO] [stderr]    Compiling statrs v0.16.0
[INFO] [stderr]    Compiling igwas v1.0.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 16.06s
[INFO] running `Command { std: "docker" "inspect" "6bf53ab8e73aa974615986997e310613cd0d3a3559a005a63b45fd8d3c31a9b5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6bf53ab8e73aa974615986997e310613cd0d3a3559a005a63b45fd8d3c31a9b5", kill_on_drop: false }`
[INFO] [stdout] 6bf53ab8e73aa974615986997e310613cd0d3a3559a005a63b45fd8d3c31a9b5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+1.75.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 6351e3f5b8b2938f1a9804fcd1cf2c6347b6108a75162723154f484ce372e01a
[INFO] running `Command { std: "docker" "start" "-a" "6351e3f5b8b2938f1a9804fcd1cf2c6347b6108a75162723154f484ce372e01a", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.07s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/igwas-85cc6d18d2df31c1)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/igwas-01cb2dfda75c4dcd)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/integration_test.rs (/opt/rustwide/target/debug/deps/integration_test-e39796df9af9b085)
[INFO] [stdout] 
[INFO] [stdout] running 6 tests
[INFO] [stdout] test cli_help ... ok
[INFO] [stdout] test read_projection_matrix ... ok
[INFO] [stdout] test read_gwas_results ... ok
[INFO] [stdout] test cli_full ... ok
[INFO] [stdout] test test_run_cli ... ok
[INFO] [stdout] test run_fn ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 3.42s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/utils.rs (/opt/rustwide/target/debug/deps/utils-9fad48e493b699c7)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests igwas
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "6351e3f5b8b2938f1a9804fcd1cf2c6347b6108a75162723154f484ce372e01a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6351e3f5b8b2938f1a9804fcd1cf2c6347b6108a75162723154f484ce372e01a", kill_on_drop: false }`
[INFO] [stdout] 6351e3f5b8b2938f1a9804fcd1cf2c6347b6108a75162723154f484ce372e01a
