[INFO] fetching crate rust_sbml 0.7.0...
[INFO] testing rust_sbml-0.7.0 against 1.69.0 for beta-1.70-1
[INFO] extracting crate rust_sbml 0.7.0 into /workspace/builds/worker-0-tc1/source
[INFO] validating manifest of crates.io crate rust_sbml 0.7.0 on toolchain 1.69.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.69.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate rust_sbml 0.7.0
[INFO] finished tweaking crates.io crate rust_sbml 0.7.0
[INFO] tweaked toml for crates.io crate rust_sbml 0.7.0 written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] crate crates.io crate rust_sbml 0.7.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.69.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.14.5
[INFO] [stderr]   Downloaded pyo3-build-config v0.14.5
[INFO] [stderr]   Downloaded pyo3 v0.14.5
[INFO] [stderr]   Downloaded quick-xml v0.23.0-alpha3
[INFO] [stderr]   Downloaded pyo3-macros v0.14.5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5ff2268d62e97bff2cde7d5815dd6ed5b47097566f13b8d0ca110b04b60e07ed" "/opt/rustwide/cargo-home/bin/cargo" "+1.69.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 502110fac85ac96cca475d91eef07ba1613aba16a57d7795c8d95a11023369dd
[INFO] running `Command { std: "docker" "start" "-a" "502110fac85ac96cca475d91eef07ba1613aba16a57d7795c8d95a11023369dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "502110fac85ac96cca475d91eef07ba1613aba16a57d7795c8d95a11023369dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "502110fac85ac96cca475d91eef07ba1613aba16a57d7795c8d95a11023369dd", kill_on_drop: false }`
[INFO] [stdout] 502110fac85ac96cca475d91eef07ba1613aba16a57d7795c8d95a11023369dd
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5ff2268d62e97bff2cde7d5815dd6ed5b47097566f13b8d0ca110b04b60e07ed" "/opt/rustwide/cargo-home/bin/cargo" "+1.69.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e40505c94e05fff22ea4c90aaf611bfbb73a90e811c0bf7a6a1676365fce9354
[INFO] running `Command { std: "docker" "start" "-a" "e40505c94e05fff22ea4c90aaf611bfbb73a90e811c0bf7a6a1676365fce9354", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.32
[INFO] [stderr]    Compiling unicode-xid v0.2.2
[INFO] [stderr]    Compiling syn v1.0.81
[INFO] [stderr]    Compiling proc-macro-hack v0.5.19
[INFO] [stderr]    Compiling pyo3-build-config v0.14.5
[INFO] [stderr]    Compiling once_cell v1.8.0
[INFO] [stderr]    Compiling libc v0.2.106
[INFO] [stderr]    Compiling serde_derive v1.0.130
[INFO] [stderr]    Compiling parking_lot_core v0.8.5
[INFO] [stderr]    Compiling serde v1.0.130
[INFO] [stderr]    Compiling memchr v2.4.1
[INFO] [stderr]    Compiling unindent v0.1.7
[INFO] [stderr]    Compiling smallvec v1.7.0
[INFO] [stderr]    Compiling either v1.6.1
[INFO] [stderr]    Compiling instant v0.1.12
[INFO] [stderr]    Compiling lock_api v0.4.5
[INFO] [stderr]    Compiling itertools v0.8.2
[INFO] [stderr]    Compiling quote v1.0.10
[INFO] [stderr]    Compiling paste-impl v0.1.18
[INFO] [stderr]    Compiling parking_lot v0.11.2
[INFO] [stderr]    Compiling pyo3 v0.14.5
[INFO] [stderr]    Compiling paste v0.1.18
[INFO] [stderr]    Compiling pyo3-macros-backend v0.14.5
[INFO] [stderr]    Compiling indoc-impl v0.3.6
[INFO] [stderr]    Compiling indoc v0.3.6
[INFO] [stderr]    Compiling pyo3-macros v0.14.5
[INFO] [stderr]    Compiling quick-xml v0.23.0-alpha3
[INFO] [stderr]    Compiling rust_sbml v0.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 16.56s
[INFO] running `Command { std: "docker" "inspect" "e40505c94e05fff22ea4c90aaf611bfbb73a90e811c0bf7a6a1676365fce9354", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e40505c94e05fff22ea4c90aaf611bfbb73a90e811c0bf7a6a1676365fce9354", kill_on_drop: false }`
[INFO] [stdout] e40505c94e05fff22ea4c90aaf611bfbb73a90e811c0bf7a6a1676365fce9354
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5ff2268d62e97bff2cde7d5815dd6ed5b47097566f13b8d0ca110b04b60e07ed" "/opt/rustwide/cargo-home/bin/cargo" "+1.69.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 2de8d6054c8090aa6f773d5b6d379f1004b8d9ecc5747b2a65b145ddced1a659
[INFO] running `Command { std: "docker" "start" "-a" "2de8d6054c8090aa6f773d5b6d379f1004b8d9ecc5747b2a65b145ddced1a659", kill_on_drop: false }`
[INFO] [stderr]    Compiling rust_sbml v0.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 3.11s
[INFO] running `Command { std: "docker" "inspect" "2de8d6054c8090aa6f773d5b6d379f1004b8d9ecc5747b2a65b145ddced1a659", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2de8d6054c8090aa6f773d5b6d379f1004b8d9ecc5747b2a65b145ddced1a659", kill_on_drop: false }`
[INFO] [stdout] 2de8d6054c8090aa6f773d5b6d379f1004b8d9ecc5747b2a65b145ddced1a659
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5ff2268d62e97bff2cde7d5815dd6ed5b47097566f13b8d0ca110b04b60e07ed" "/opt/rustwide/cargo-home/bin/cargo" "+1.69.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 75c54d984dad760ae0508560c26c2bd928ab0f343aa5110557f4c8e104d88cba
[INFO] running `Command { std: "docker" "start" "-a" "75c54d984dad760ae0508560c26c2bd928ab0f343aa5110557f4c8e104d88cba", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.02s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/rust_sbml-c405ed07d6769aaa)
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test pyo::tests::it_works ... ok
[INFO] [stdout] test tests::parse_minimal_model_with_reactions ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/tests.rs (/opt/rustwide/target/debug/deps/tests-7bd7cea3308f2480)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test read_units_succeed ... ok
[INFO] [stdout] test test_constraints ... ok
[INFO] [stdout] test glc_retrieves_corect_formula ... ok
[INFO] [stdout] test read_abstraction_objective_succeeds ... ok
[INFO] [stdout] test model_has_annotations ... ok
[INFO] [stdout] test reaction_annotation_is_parsed ... ok
[INFO] [stdout] test model_has_more_species_annotations_species ... ok
[INFO] [stdout] test read_model_raw_objective_succeeds ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.06s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests rust_sbml
[INFO] [stdout] 
[INFO] [stdout] running 17 tests
[INFO] [stdout] test src/base_types.rs - base_types::SpeciesReference (line 154) ... FAILED
[INFO] [stdout] test src/model.rs - model::Model::get_list_of_reactions (line 184) ... FAILED
[INFO] [stdout] test src/model.rs - model::Model::get_list_of_compartments (line 154) ... FAILED
[INFO] [stdout] test src/base_types.rs - base_types::FunctionDefinition (line 287) ... ok
[INFO] [stdout] test src/base_types.rs - base_types::Compartment (line 13) ... ok
[INFO] [stdout] test src/rdf.rs - rdf::Rdf (line 89) ... ok
[INFO] [stdout] test src/base_types.rs - base_types::Parameter (line 95) ... ok
[INFO] [stdout] test src/base_types.rs - base_types::Reaction (line 231) ... ok
[INFO] [stdout] test src/base_types.rs - base_types::Rule (line 327) ... ok
[INFO] [stdout] test src/base_types.rs - base_types::Objective (line 426) ... ok
[INFO] [stdout] test src/lib.rs - (line 19) ... ok
[INFO] [stdout] test src/base_types.rs - base_types::Constraint (line 385) ... ok
[INFO] [stdout] test src/base_types.rs - base_types::InitialAssignment (line 123) ... ok
[INFO] [stdout] test src/base_types.rs - base_types::Species (line 50) ... ok
[INFO] [stdout] test src/model.rs - model::Model (line 114) ... ok
[INFO] [stdout] test src/model.rs - model::ModelRaw (line 17) ... ok
[INFO] [stdout] test src/model.rs - model::Model::get_list_of_species (line 169) ... ok
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- src/base_types.rs - base_types::SpeciesReference (line 154) stdout ----
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note: LC_ALL="C" PATH="/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/bin:/opt/rustwide/cargo-home/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin" VSLANG="1033" "cc" "-m64" "/tmp/rustcVRPAbW/symbols.o" "/tmp/rustdoctesteCVOiZ/rust_out.rust_out.5bfee551-cgu.0.rcgu.o" "/tmp/rustdoctesteCVOiZ/rust_out.j00p4ncf7xg64kg.rcgu.o" "-Wl,--as-needed" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/librust_sbml.rlib" "/opt/rustwide/target/debug/deps/libquick_xml-6f1c09cf1540923e.rlib" "/opt/rustwide/target/debug/deps/libmemchr-e30a17317ff1667e.rlib" "/opt/rustwide/target/debug/deps/libitertools-5fdee0e78689e720.rlib" "/opt/rustwide/target/debug/deps/libeither-35bc8c9d74b85ee8.rlib" "/opt/rustwide/target/debug/deps/libserde-a1dc4cfb20478415.rlib" "/opt/rustwide/target/debug/deps/libpyo3-4c8493b2db461a5f.rlib" "/opt/rustwide/target/debug/deps/libparking_lot-d56485372180fec8.rlib" "/opt/rustwide/target/debug/deps/libparking_lot_core-0548f885234725d2.rlib" "/opt/rustwide/target/debug/deps/libsmallvec-c9c12de244d0b753.rlib" "/opt/rustwide/target/debug/deps/liblock_api-f14a8142d92b1256.rlib" "/opt/rustwide/target/debug/deps/libscopeguard-f471875f675163b5.rlib" "/opt/rustwide/target/debug/deps/libinstant-1bfa666718b38be4.rlib" "/opt/rustwide/target/debug/deps/libcfg_if-e5e118dd7d121aaa.rlib" "/opt/rustwide/target/debug/deps/liblibc-05e2460b842cf648.rlib" "/opt/rustwide/target/debug/deps/libunindent-c800aef61d5d79cb.rlib" "/opt/rustwide/target/debug/deps/libpaste-65acee8811b2f325.rlib" "/opt/rustwide/target/debug/deps/libindoc-d53ca9d096957d28.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-89bc084783fdc439.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-8bee4b287d4367c1.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-d61707aed80694c0.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libmemchr-d85366256f22345b.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-96069b86b8a8cae9.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-d19d53abf68dfa6c.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-787cbccd19d64ac6.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd_detect-b3837a36b830e0d0.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-e3deb0e7e3f04966.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-dabbb79c9815def4.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-305b01f34c9409f2.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-f833521df6074e73.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-9ac333113350d171.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-1c126114322d0eee.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-bad9164fdeeecf92.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-f9374b1e480fa681.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-207f06e41d9603af.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-7e2768e66e984e85.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-957b4aff41f8cd46.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctesteCVOiZ/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: collect2: fatal error: ld terminated with signal 9 [Killed]
[INFO] [stdout]           compilation terminated.
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to previous error
[INFO] [stdout] 
[INFO] [stdout] Couldn't compile the test.
[INFO] [stdout] ---- src/model.rs - model::Model::get_list_of_reactions (line 184) stdout ----
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note: LC_ALL="C" PATH="/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/bin:/opt/rustwide/cargo-home/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin" VSLANG="1033" "cc" "-m64" "/tmp/rustcEJPpuu/symbols.o" "/tmp/rustdoctesturWivg/rust_out.rust_out.5bfee551-cgu.0.rcgu.o" "/tmp/rustdoctesturWivg/rust_out.j00p4ncf7xg64kg.rcgu.o" "-Wl,--as-needed" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/librust_sbml.rlib" "/opt/rustwide/target/debug/deps/libquick_xml-6f1c09cf1540923e.rlib" "/opt/rustwide/target/debug/deps/libmemchr-e30a17317ff1667e.rlib" "/opt/rustwide/target/debug/deps/libitertools-5fdee0e78689e720.rlib" "/opt/rustwide/target/debug/deps/libeither-35bc8c9d74b85ee8.rlib" "/opt/rustwide/target/debug/deps/libserde-a1dc4cfb20478415.rlib" "/opt/rustwide/target/debug/deps/libpyo3-4c8493b2db461a5f.rlib" "/opt/rustwide/target/debug/deps/libparking_lot-d56485372180fec8.rlib" "/opt/rustwide/target/debug/deps/libparking_lot_core-0548f885234725d2.rlib" "/opt/rustwide/target/debug/deps/libsmallvec-c9c12de244d0b753.rlib" "/opt/rustwide/target/debug/deps/liblock_api-f14a8142d92b1256.rlib" "/opt/rustwide/target/debug/deps/libscopeguard-f471875f675163b5.rlib" "/opt/rustwide/target/debug/deps/libinstant-1bfa666718b38be4.rlib" "/opt/rustwide/target/debug/deps/libcfg_if-e5e118dd7d121aaa.rlib" "/opt/rustwide/target/debug/deps/liblibc-05e2460b842cf648.rlib" "/opt/rustwide/target/debug/deps/libunindent-c800aef61d5d79cb.rlib" "/opt/rustwide/target/debug/deps/libpaste-65acee8811b2f325.rlib" "/opt/rustwide/target/debug/deps/libindoc-d53ca9d096957d28.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-89bc084783fdc439.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-8bee4b287d4367c1.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-d61707aed80694c0.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libmemchr-d85366256f22345b.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-96069b86b8a8cae9.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-d19d53abf68dfa6c.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-787cbccd19d64ac6.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd_detect-b3837a36b830e0d0.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-e3deb0e7e3f04966.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-dabbb79c9815def4.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-305b01f34c9409f2.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-f833521df6074e73.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-9ac333113350d171.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-1c126114322d0eee.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-bad9164fdeeecf92.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-f9374b1e480fa681.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-207f06e41d9603af.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-7e2768e66e984e85.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-957b4aff41f8cd46.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctesturWivg/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: collect2: fatal error: ld terminated with signal 9 [Killed]
[INFO] [stdout]           compilation terminated.
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to previous error
[INFO] [stdout] 
[INFO] [stdout] Couldn't compile the test.
[INFO] [stdout] ---- src/model.rs - model::Model::get_list_of_compartments (line 154) stdout ----
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note: LC_ALL="C" PATH="/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/bin:/opt/rustwide/cargo-home/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin" VSLANG="1033" "cc" "-m64" "/tmp/rustcbHejQe/symbols.o" "/tmp/rustdoctest82MQTv/rust_out.rust_out.5bfee551-cgu.0.rcgu.o" "/tmp/rustdoctest82MQTv/rust_out.j00p4ncf7xg64kg.rcgu.o" "-Wl,--as-needed" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/librust_sbml.rlib" "/opt/rustwide/target/debug/deps/libquick_xml-6f1c09cf1540923e.rlib" "/opt/rustwide/target/debug/deps/libmemchr-e30a17317ff1667e.rlib" "/opt/rustwide/target/debug/deps/libitertools-5fdee0e78689e720.rlib" "/opt/rustwide/target/debug/deps/libeither-35bc8c9d74b85ee8.rlib" "/opt/rustwide/target/debug/deps/libserde-a1dc4cfb20478415.rlib" "/opt/rustwide/target/debug/deps/libpyo3-4c8493b2db461a5f.rlib" "/opt/rustwide/target/debug/deps/libparking_lot-d56485372180fec8.rlib" "/opt/rustwide/target/debug/deps/libparking_lot_core-0548f885234725d2.rlib" "/opt/rustwide/target/debug/deps/libsmallvec-c9c12de244d0b753.rlib" "/opt/rustwide/target/debug/deps/liblock_api-f14a8142d92b1256.rlib" "/opt/rustwide/target/debug/deps/libscopeguard-f471875f675163b5.rlib" "/opt/rustwide/target/debug/deps/libinstant-1bfa666718b38be4.rlib" "/opt/rustwide/target/debug/deps/libcfg_if-e5e118dd7d121aaa.rlib" "/opt/rustwide/target/debug/deps/liblibc-05e2460b842cf648.rlib" "/opt/rustwide/target/debug/deps/libunindent-c800aef61d5d79cb.rlib" "/opt/rustwide/target/debug/deps/libpaste-65acee8811b2f325.rlib" "/opt/rustwide/target/debug/deps/libindoc-d53ca9d096957d28.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-89bc084783fdc439.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-8bee4b287d4367c1.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-d61707aed80694c0.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libmemchr-d85366256f22345b.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-96069b86b8a8cae9.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-d19d53abf68dfa6c.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-787cbccd19d64ac6.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd_detect-b3837a36b830e0d0.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-e3deb0e7e3f04966.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-dabbb79c9815def4.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-305b01f34c9409f2.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-f833521df6074e73.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-9ac333113350d171.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-1c126114322d0eee.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-bad9164fdeeecf92.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-f9374b1e480fa681.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-207f06e41d9603af.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-7e2768e66e984e85.rlib" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-957b4aff41f8cd46.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/rustup-home/toolchains/1.69.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctest82MQTv/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: collect2: fatal error: ld terminated with signal 9 [Killed]
[INFO] [stdout]           compilation terminated.
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to previous error
[INFO] [stderr] error: doctest failed, to rerun pass `--doc`
[INFO] [stdout] 
[INFO] [stdout] Couldn't compile the test.
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     src/base_types.rs - base_types::SpeciesReference (line 154)
[INFO] [stdout]     src/model.rs - model::Model::get_list_of_compartments (line 154)
[INFO] [stdout]     src/model.rs - model::Model::get_list_of_reactions (line 184)
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 14 passed; 3 failed; 0 ignored; 0 measured; 0 filtered out; finished in 2.60s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "75c54d984dad760ae0508560c26c2bd928ab0f343aa5110557f4c8e104d88cba", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "75c54d984dad760ae0508560c26c2bd928ab0f343aa5110557f4c8e104d88cba", kill_on_drop: false }`
[INFO] [stdout] 75c54d984dad760ae0508560c26c2bd928ab0f343aa5110557f4c8e104d88cba
