[INFO] cloning repository https://github.com/chfi/rust-qtlreaper
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/chfi/rust-qtlreaper" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 8d650921ec4aec63c42068de58b91579228f57b1
[INFO] testing chfi/rust-qtlreaper against 1.69.0 for beta-1.70-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/chfi/rust-qtlreaper on toolchain 1.69.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.69.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/chfi/rust-qtlreaper
[INFO] finished tweaking git repo https://github.com/chfi/rust-qtlreaper
[INFO] tweaked toml for git repo https://github.com/chfi/rust-qtlreaper written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/chfi/rust-qtlreaper already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.69.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5ff2268d62e97bff2cde7d5815dd6ed5b47097566f13b8d0ca110b04b60e07ed" "/opt/rustwide/cargo-home/bin/cargo" "+1.69.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] e4c51c3c0c24ac978c48b48d1a14b8251ab36be53d4e669b0f204d3520b6835b
[INFO] running `Command { std: "docker" "start" "-a" "e4c51c3c0c24ac978c48b48d1a14b8251ab36be53d4e669b0f204d3520b6835b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e4c51c3c0c24ac978c48b48d1a14b8251ab36be53d4e669b0f204d3520b6835b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e4c51c3c0c24ac978c48b48d1a14b8251ab36be53d4e669b0f204d3520b6835b", kill_on_drop: false }`
[INFO] [stdout] e4c51c3c0c24ac978c48b48d1a14b8251ab36be53d4e669b0f204d3520b6835b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5ff2268d62e97bff2cde7d5815dd6ed5b47097566f13b8d0ca110b04b60e07ed" "/opt/rustwide/cargo-home/bin/cargo" "+1.69.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 5b9fc3b8199233a2a57ba22eb6d1bb9f97839fe60acd64b0e79e296e1b8faef4
[INFO] running `Command { std: "docker" "start" "-a" "5b9fc3b8199233a2a57ba22eb6d1bb9f97839fe60acd64b0e79e296e1b8faef4", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.54
[INFO] [stderr]    Compiling rand_core v0.4.0
[INFO] [stderr]    Compiling syn v0.15.34
[INFO] [stderr]    Compiling arrayvec v0.4.10
[INFO] [stderr]    Compiling nodrop v0.1.13
[INFO] [stderr]    Compiling num-traits v0.2.8
[INFO] [stderr]    Compiling rayon-core v1.4.1
[INFO] [stderr]    Compiling memoffset v0.2.1
[INFO] [stderr]    Compiling scopeguard v0.3.3
[INFO] [stderr]    Compiling rand_pcg v0.1.2
[INFO] [stderr]    Compiling rand_chacha v0.1.1
[INFO] [stderr]    Compiling num-complex v0.2.3
[INFO] [stderr]    Compiling unicode-segmentation v1.3.0
[INFO] [stderr]    Compiling crossbeam-utils v0.2.2
[INFO] [stderr]    Compiling serde v1.0.91
[INFO] [stderr]    Compiling quote v0.6.12
[INFO] [stderr]    Compiling matrixmultiply v0.1.15
[INFO] [stderr]    Compiling either v1.5.2
[INFO] [stderr]    Compiling ryu v0.2.8
[INFO] [stderr]    Compiling rand_core v0.3.1
[INFO] [stderr]    Compiling unicode-width v0.1.5
[INFO] [stderr]    Compiling rand v0.6.5
[INFO] [stderr]    Compiling ndarray v0.12.1
[INFO] [stderr]    Compiling vec_map v0.8.1
[INFO] [stderr]    Compiling bitflags v1.0.4
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling rayon v1.0.3
[INFO] [stderr]    Compiling heck v0.3.1
[INFO] [stderr]    Compiling rand_hc v0.1.0
[INFO] [stderr]    Compiling rand_isaac v0.1.1
[INFO] [stderr]    Compiling rand_xorshift v0.1.1
[INFO] [stderr]    Compiling itertools v0.7.11
[INFO] [stderr]    Compiling rand_jitter v0.1.4
[INFO] [stderr]    Compiling crossbeam-epoch v0.3.1
[INFO] [stderr]    Compiling num_cpus v1.10.0
[INFO] [stderr]    Compiling atty v0.2.11
[INFO] [stderr]    Compiling rand_os v0.1.3
[INFO] [stderr]    Compiling clap v2.33.0
[INFO] [stderr]    Compiling crossbeam-deque v0.2.0
[INFO] [stderr]    Compiling serde_derive v1.0.91
[INFO] [stderr]    Compiling structopt-derive v0.2.15
[INFO] [stderr]    Compiling structopt v0.2.15
[INFO] [stderr]    Compiling serde_json v1.0.39
[INFO] [stderr]    Compiling qtlreaper v0.1.4 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused `#[macro_use]` import
[INFO] [stdout]  --> src/lib.rs:5:22
[INFO] [stdout]   |
[INFO] [stdout] 5 | #[macro_use(s, azip, array)]
[INFO] [stdout]   |                      ^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `PERMUTATION_TESTSIZE` is never used
[INFO] [stdout]  --> src/regression.rs:5:7
[INFO] [stdout]   |
[INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000;
[INFO] [stdout]   |       ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `regression_2n_variance` is never used
[INFO] [stdout]    --> src/regression.rs:250:4
[INFO] [stdout]     |
[INFO] [stdout] 250 | fn regression_2n_variance(
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `n_bootstrap` is never read
[INFO] [stdout]   --> src/main.rs:67:5
[INFO] [stdout]    |
[INFO] [stdout] 15 | struct Opt {
[INFO] [stdout]    |        --- field in this struct
[INFO] [stdout] ...
[INFO] [stdout] 67 |     n_bootstrap: usize,
[INFO] [stdout]    |     ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Opt` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 15.82s
[INFO] running `Command { std: "docker" "inspect" "5b9fc3b8199233a2a57ba22eb6d1bb9f97839fe60acd64b0e79e296e1b8faef4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5b9fc3b8199233a2a57ba22eb6d1bb9f97839fe60acd64b0e79e296e1b8faef4", kill_on_drop: false }`
[INFO] [stdout] 5b9fc3b8199233a2a57ba22eb6d1bb9f97839fe60acd64b0e79e296e1b8faef4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5ff2268d62e97bff2cde7d5815dd6ed5b47097566f13b8d0ca110b04b60e07ed" "/opt/rustwide/cargo-home/bin/cargo" "+1.69.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 4d0df663a8fc681aa4fac9d255fb63b891eea6ec743b0a9d57722d0de47437c6
[INFO] running `Command { std: "docker" "start" "-a" "4d0df663a8fc681aa4fac9d255fb63b891eea6ec743b0a9d57722d0de47437c6", kill_on_drop: false }`
[INFO] [stdout] warning: unused `#[macro_use]` import
[INFO] [stdout]  --> src/lib.rs:5:22
[INFO] [stdout]   |
[INFO] [stdout] 5 | #[macro_use(s, azip, array)]
[INFO] [stdout]   |                      ^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `PERMUTATION_TESTSIZE` is never used
[INFO] [stdout]  --> src/regression.rs:5:7
[INFO] [stdout]   |
[INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000;
[INFO] [stdout]   |       ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling qtlreaper v0.1.4 (/opt/rustwide/workdir)
[INFO] [stdout] warning: function `regression_2n_variance` is never used
[INFO] [stdout]    --> src/regression.rs:250:4
[INFO] [stdout]     |
[INFO] [stdout] 250 | fn regression_2n_variance(
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `n_bootstrap` is never read
[INFO] [stdout]   --> src/main.rs:67:5
[INFO] [stdout]    |
[INFO] [stdout] 15 | struct Opt {
[INFO] [stdout]    |        --- field in this struct
[INFO] [stdout] ...
[INFO] [stdout] 67 |     n_bootstrap: usize,
[INFO] [stdout]    |     ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Opt` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `PERMUTATION_TESTSIZE` is never used
[INFO] [stdout]  --> src/regression.rs:5:7
[INFO] [stdout]   |
[INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000;
[INFO] [stdout]   |       ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `regression_2n_variance` is never used
[INFO] [stdout]    --> src/regression.rs:250:4
[INFO] [stdout]     |
[INFO] [stdout] 250 | fn regression_2n_variance(
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.89s
[INFO] running `Command { std: "docker" "inspect" "4d0df663a8fc681aa4fac9d255fb63b891eea6ec743b0a9d57722d0de47437c6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4d0df663a8fc681aa4fac9d255fb63b891eea6ec743b0a9d57722d0de47437c6", kill_on_drop: false }`
[INFO] [stdout] 4d0df663a8fc681aa4fac9d255fb63b891eea6ec743b0a9d57722d0de47437c6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5ff2268d62e97bff2cde7d5815dd6ed5b47097566f13b8d0ca110b04b60e07ed" "/opt/rustwide/cargo-home/bin/cargo" "+1.69.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] b4fbf09e25ef7a8add1918cd30d5abe401d53f6e02fff912ad6e478591d0c825
[INFO] running `Command { std: "docker" "start" "-a" "b4fbf09e25ef7a8add1918cd30d5abe401d53f6e02fff912ad6e478591d0c825", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr] warning: unused `#[macro_use]` import
[INFO] [stderr]  --> src/lib.rs:5:22
[INFO] [stderr]   |
[INFO] [stderr] 5 | #[macro_use(s, azip, array)]
[INFO] [stderr]   |                      ^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: constant `PERMUTATION_TESTSIZE` is never used
[INFO] [stderr]  --> src/regression.rs:5:7
[INFO] [stderr]   |
[INFO] [stderr] 5 | const PERMUTATION_TESTSIZE: usize = 1000;
[INFO] [stderr]   |       ^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: function `regression_2n_variance` is never used
[INFO] [stderr]    --> src/regression.rs:250:4
[INFO] [stderr]     |
[INFO] [stderr] 250 | fn regression_2n_variance(
[INFO] [stderr]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: `qtlreaper` (lib) generated 3 warnings
[INFO] [stderr] warning: `qtlreaper` (lib test) generated 2 warnings (2 duplicates)
[INFO] [stderr] warning: field `n_bootstrap` is never read
[INFO] [stderr]   --> src/main.rs:67:5
[INFO] [stderr]    |
[INFO] [stderr] 15 | struct Opt {
[INFO] [stderr]    |        --- field in this struct
[INFO] [stderr] ...
[INFO] [stderr] 67 |     n_bootstrap: usize,
[INFO] [stderr]    |     ^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `Opt` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stderr]    = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: `qtlreaper` (bin "qtlreaper" test) generated 1 warning
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.36s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/qtlreaper-3cabc829a52e3ee0)
[INFO] [stdout] 
[INFO] [stdout] running 3 tests
[INFO] [stdout] test geneobject::tests::it_can_parse_header ... ok
[INFO] [stdout] test geneobject::tests::it_can_parse_metadata ... ok
[INFO] [stdout] test geneobject::tests::it_can_estimate_unknown_genotypes ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- geneobject::tests::it_can_estimate_unknown_genotypes stdout ----
[INFO] [stdout] thread 'geneobject::tests::it_can_estimate_unknown_genotypes' panicked at 'assertion failed: `(left == right)`
[INFO] [stdout]   left: `[Locus { dominance: None, genotype: [Mat, Mat, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-1.0, -1.0, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk1", centi_morgan: 10.0, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Pat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-0.18523506128077272, 1.0, 0.9616255554798838] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk2", centi_morgan: 30.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.18906668494617707, 0.3421367343627406, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk3", centi_morgan: 40.1, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.5826065314914579, -0.32233300305265566, 0.3223330030526552] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk4", centi_morgan: 50.2, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -0.34213673436274084] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk5", centi_morgan: 60.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Mat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk6", centi_morgan: 70.1, mega_basepair: None, chromosome: "1" } }]`,
[INFO] [stdout]  right: `[Locus { dominance: None, genotype: [Mat, Mat, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-1.0, -1.0, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk1", centi_morgan: 10.0, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Pat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-0.18523506128077272, 1.0, 0.9616255554798838] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk2", centi_morgan: 30.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.18906668494617707, 0.3421367343627405, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk3", centi_morgan: 40.1, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.5826065314914579, -0.3223330030526561, 0.3223330030526552] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk4", centi_morgan: 50.2, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -0.34213673436274084] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk5", centi_morgan: 60.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Mat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk6", centi_morgan: 70.1, mega_basepair: None, chromosome: "1" } }]`', src/geneobject.rs:895:9
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x55f1a8efb46a - std::backtrace_rs::backtrace::libunwind::trace::ha9053a9a07ca49cb
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5
[INFO] [stdout]    1:     0x55f1a8efb46a - std::backtrace_rs::backtrace::trace_unsynchronized::h9c2852a457ad564e
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stdout]    2:     0x55f1a8efb46a - std::sys_common::backtrace::_print_fmt::h457936fbfaa0070f
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/sys_common/backtrace.rs:65:5
[INFO] [stdout]    3:     0x55f1a8efb46a - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::h5779d7bf7f70cb0c
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/sys_common/backtrace.rs:44:22
[INFO] [stdout]    4:     0x55f1a8f1ef9e - core::fmt::write::h5a4baaff1bcd3eb5
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/core/src/fmt/mod.rs:1232:17
[INFO] [stdout]    5:     0x55f1a8ef88e5 - std::io::Write::write_fmt::h478f79c628ef31d1
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/io/mod.rs:1684:15
[INFO] [stdout]    6:     0x55f1a8efb235 - std::sys_common::backtrace::_print::h5fcdc36060f177e8
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/sys_common/backtrace.rs:47:5
[INFO] [stdout]    7:     0x55f1a8efb235 - std::sys_common::backtrace::print::h54ca9458b876c8bf
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/sys_common/backtrace.rs:34:9
[INFO] [stdout]    8:     0x55f1a8efcfff - std::panicking::default_hook::{{closure}}::hbe471161c7664ed6
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/panicking.rs:271:22
[INFO] [stdout]    9:     0x55f1a8efccbf - std::panicking::default_hook::ha3500da57aa4ac4f
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/panicking.rs:287:9
[INFO] [stdout]   10:     0x55f1a8ec2427 - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::hdf1b89dd137ece34
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/alloc/src/boxed.rs:2001:9
[INFO] [stdout]   11:     0x55f1a8ec2427 - test::test_main::{{closure}}::h9081a79f20e75698
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/test/src/lib.rs:135:21
[INFO] [stdout]   12:     0x55f1a8efd72d - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::h6507bddc3eebb4a5
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/alloc/src/boxed.rs:2001:9
[INFO] [stdout]   13:     0x55f1a8efd72d - std::panicking::rust_panic_with_hook::h50c09d000dc561d2
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/panicking.rs:696:13
[INFO] [stdout]   14:     0x55f1a8efd4a9 - std::panicking::begin_panic_handler::{{closure}}::h9e2b2176e00e0d9c
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/panicking.rs:583:13
[INFO] [stdout]   15:     0x55f1a8efb8d6 - std::sys_common::backtrace::__rust_end_short_backtrace::h5739b8e512c09d02
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/sys_common/backtrace.rs:150:18
[INFO] [stdout]   16:     0x55f1a8efd1b2 - rust_begin_unwind
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/panicking.rs:579:5
[INFO] [stdout]   17:     0x55f1a8e69b83 - core::panicking::panic_fmt::hf33a1475b4dc5c3e
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/core/src/panicking.rs:64:14
[INFO] [stdout]   18:     0x55f1a8e69ebf - core::panicking::assert_failed_inner::haf9816227b20b6f2
[INFO] [stdout]   19:     0x55f1a8e7579a - core::panicking::assert_failed::h349ea4968c063557
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/core/src/panicking.rs:211:5
[INFO] [stdout]   20:     0x55f1a8e7f8a3 - qtlreaper::geneobject::tests::it_can_estimate_unknown_genotypes::h1b866c65e4a54702
[INFO] [stdout]                                at /opt/rustwide/workdir/src/geneobject.rs:895:9
[INFO] [stdout]   21:     0x55f1a8e7d477 - qtlreaper::geneobject::tests::it_can_estimate_unknown_genotypes::{{closure}}::hcfb462c6f944f8fb
[INFO] [stdout]                                at /opt/rustwide/workdir/src/geneobject.rs:808:44
[INFO] [stdout]   22:     0x55f1a8e7b155 - core::ops::function::FnOnce::call_once::he22c32f5121e0069
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   23:     0x55f1a8ec780f - core::ops::function::FnOnce::call_once::h7d969581be7d0075
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   24:     0x55f1a8ec780f - test::__rust_begin_short_backtrace::hca25a52684e56655
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/test/src/lib.rs:656:18
[INFO] [stdout]   25:     0x55f1a8e98e2c - test::run_test::{{closure}}::ha8ac744c4af1a4bb
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/test/src/lib.rs:647:30
[INFO] [stdout]   26:     0x55f1a8e98e2c - core::ops::function::FnOnce::call_once{{vtable.shim}}::h7b411a9ed45bdecf
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   27:     0x55f1a8ec67d6 - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::hd05328869a8ed200
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/alloc/src/boxed.rs:1987:9
[INFO] [stdout]   28:     0x55f1a8ec67d6 - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::h0c601ce20bd5b2be
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/core/src/panic/unwind_safe.rs:271:9
[INFO] [stdout]   29:     0x55f1a8ec67d6 - std::panicking::try::do_call::ha4be5c164fe30854
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/panicking.rs:487:40
[INFO] [stdout]   30:     0x55f1a8ec67d6 - std::panicking::try::h604546f3609af05f
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/panicking.rs:451:19
[INFO] [stdout]   31:     0x55f1a8ec67d6 - std::panic::catch_unwind::h5bfa8afe44c9c2f9
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/panic.rs:140:14
[INFO] [stdout]   32:     0x55f1a8ec67d6 - test::run_test_in_process::hd50dee55dd63e6aa
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/test/src/lib.rs:679:27
[INFO] [stdout]   33:     0x55f1a8ec67d6 - test::run_test::run_test_inner::{{closure}}::h4aa0f433aa85cea8
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/test/src/lib.rs:573:39
[INFO] [stdout]   34:     0x55f1a8e934a1 - test::run_test::run_test_inner::{{closure}}::had56431adf24b4d6
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/test/src/lib.rs:600:37
[INFO] [stdout]   35:     0x55f1a8e934a1 - std::sys_common::backtrace::__rust_begin_short_backtrace::ha8d9890e0c73bf13
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/sys_common/backtrace.rs:134:18
[INFO] [stdout]   36:     0x55f1a8e98ebb - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h251832bcb4a95327
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/thread/mod.rs:560:17
[INFO] [stdout]   37:     0x55f1a8e98ebb - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::h8fdff598fa414831
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/core/src/panic/unwind_safe.rs:271:9
[INFO] [stdout]   38:     0x55f1a8e98ebb - std::panicking::try::do_call::h455dd2f7764a950f
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/panicking.rs:487:40
[INFO] [stdout]   39:     0x55f1a8e98ebb - std::panicking::try::had6f23b7b73ae72a
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/panicking.rs:451:19
[INFO] [stdout]   40:     0x55f1a8e98ebb - std::panic::catch_unwind::ha6a5ca3915b4dad0
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/panic.rs:140:14
[INFO] [stdout]   41:     0x55f1a8e98ebb - std::thread::Builder::spawn_unchecked_::{{closure}}::h883b72ef75da6231
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/thread/mod.rs:559:30
[INFO] [stdout]   42:     0x55f1a8e98ebb - core::ops::function::FnOnce::call_once{{vtable.shim}}::hb7dff73dc8bd2ccb
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   43:     0x55f1a8f01a93 - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::h39990b24eedef2ab
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/alloc/src/boxed.rs:1987:9
[INFO] [stdout]   44:     0x55f1a8f01a93 - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::h01a027258444143b
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/alloc/src/boxed.rs:1987:9
[INFO] [stdout]   45:     0x55f1a8f01a93 - std::sys::unix::thread::Thread::new::thread_start::ha4f1cdd9c25884ba
[INFO] [stdout]                                at /rustc/84c898d65adf2f39a5a98507f1fe0ce10a2b8dbc/library/std/src/sys/unix/thread.rs:108:17
[INFO] [stdout]   46:     0x7f30e2fdeb43 - <unknown>
[INFO] [stdout]   47:     0x7f30e306fbb4 - __clone
[INFO] [stdout]   48:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     geneobject::tests::it_can_estimate_unknown_genotypes
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 2 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--lib`
[INFO] running `Command { std: "docker" "inspect" "b4fbf09e25ef7a8add1918cd30d5abe401d53f6e02fff912ad6e478591d0c825", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b4fbf09e25ef7a8add1918cd30d5abe401d53f6e02fff912ad6e478591d0c825", kill_on_drop: false }`
[INFO] [stdout] b4fbf09e25ef7a8add1918cd30d5abe401d53f6e02fff912ad6e478591d0c825
