[INFO] fetching crate openmm-sys 7.4.1...
[INFO] testing openmm-sys-7.4.1 against beta-2023-04-20 for beta-1.70-1
[INFO] extracting crate openmm-sys 7.4.1 into /workspace/builds/worker-5-tc2/source
[INFO] validating manifest of crates.io crate openmm-sys 7.4.1 on toolchain beta-2023-04-20
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2023-04-20" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate openmm-sys 7.4.1
[INFO] finished tweaking crates.io crate openmm-sys 7.4.1
[INFO] tweaked toml for crates.io crate openmm-sys 7.4.1 written to /workspace/builds/worker-5-tc2/source/Cargo.toml
[INFO] crate crates.io crate openmm-sys 7.4.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2023-04-20" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded cmake v0.1.44
[INFO] [stderr]   Downloaded cc v1.0.59
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5ff2268d62e97bff2cde7d5815dd6ed5b47097566f13b8d0ca110b04b60e07ed" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2023-04-20" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 4a1c3670fd05eb935b58a9e13a7b6bca42f78feb5d7f9e965adf715848504a11
[INFO] running `Command { std: "docker" "start" "-a" "4a1c3670fd05eb935b58a9e13a7b6bca42f78feb5d7f9e965adf715848504a11", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4a1c3670fd05eb935b58a9e13a7b6bca42f78feb5d7f9e965adf715848504a11", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4a1c3670fd05eb935b58a9e13a7b6bca42f78feb5d7f9e965adf715848504a11", kill_on_drop: false }`
[INFO] [stdout] 4a1c3670fd05eb935b58a9e13a7b6bca42f78feb5d7f9e965adf715848504a11
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5ff2268d62e97bff2cde7d5815dd6ed5b47097566f13b8d0ca110b04b60e07ed" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2023-04-20" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 02440239ab2c460751c04f6721076bafb5a51cc528d3fb63a4291f07410c2d90
[INFO] running `Command { std: "docker" "start" "-a" "02440239ab2c460751c04f6721076bafb5a51cc528d3fb63a4291f07410c2d90", kill_on_drop: false }`
[INFO] [stderr]    Compiling cc v1.0.59
[INFO] [stderr]    Compiling cmake v0.1.44
[INFO] [stderr]    Compiling openmm-sys v7.4.1 (/opt/rustwide/workdir)
[INFO] [stderr] The following warnings were emitted during compilation:
[INFO] [stderr] 
[INFO] [stderr] warning: [OpenMM-sys] Dynamically linking against the OpenMM library.
[INFO] [stderr] 
[INFO] [stderr] error: failed to run custom build command for `openmm-sys v7.4.1 (/opt/rustwide/workdir)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/openmm-sys-dbbbcb1980d6f73e/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   cargo:warning=[OpenMM-sys] Dynamically linking against the OpenMM library.
[INFO] [stderr]   running: cd "/opt/rustwide/target/debug/build/openmm-sys-9389d78ee739b4eb/out/build" && CMAKE_PREFIX_PATH="" "cmake" "/opt/rustwide/workdir/openmm" "-DOPENMM_BUILD_PYTHON_WRAPPERS=OFF" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/openmm-sys-9389d78ee739b4eb/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Release"
[INFO] [stderr]   -- Found PythonInterp: /usr/bin/python3.10 (found version "3.10.6") 
[INFO] [stderr]   -- The C compiler identification is GNU 11.3.0
[INFO] [stderr]   -- The CXX compiler identification is GNU 11.3.0
[INFO] [stderr]   -- Detecting C compiler ABI info
[INFO] [stderr]   -- Detecting C compiler ABI info - done
[INFO] [stderr]   -- Check for working C compiler: /usr/bin/cc - skipped
[INFO] [stderr]   -- Detecting C compile features
[INFO] [stderr]   -- Detecting C compile features - done
[INFO] [stderr]   -- Detecting CXX compiler ABI info
[INFO] [stderr]   -- Detecting CXX compiler ABI info - done
[INFO] [stderr]   -- Check for working CXX compiler: /usr/bin/c++ - skipped
[INFO] [stderr]   -- Detecting CXX compile features
[INFO] [stderr]   -- Detecting CXX compile features - done
[INFO] [stderr]   -- Configuring incomplete, errors occurred!
[INFO] [stderr]   See also "/opt/rustwide/target/debug/build/openmm-sys-9389d78ee739b4eb/out/build/CMakeFiles/CMakeOutput.log".
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr]   fatal: not a git repository (or any parent up to mount point /opt/rustwide)
[INFO] [stderr]   Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
[INFO] [stderr]   CMake Deprecation Warning at CMakeLists.txt:25 (CMAKE_POLICY):
[INFO] [stderr]     The OLD behavior for policy CMP0042 will be removed from a future version
[INFO] [stderr]     of CMake.
[INFO] [stderr] 
[INFO] [stderr]     The cmake-policies(7) manual explains that the OLD behaviors of all
[INFO] [stderr]     policies are deprecated and that a policy should be set to OLD only under
[INFO] [stderr]     specific short-term circumstances.  Projects should be ported to the NEW
[INFO] [stderr]     behavior and not rely on setting a policy to OLD.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Error at /usr/share/cmake-3.22/Modules/FindPackageHandleStandardArgs.cmake:230 (message):
[INFO] [stderr]     Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
[INFO] [stderr]   Call Stack (most recent call first):
[INFO] [stderr]     /usr/share/cmake-3.22/Modules/FindPackageHandleStandardArgs.cmake:594 (_FPHSA_FAILURE_MESSAGE)
[INFO] [stderr]     /usr/share/cmake-3.22/Modules/FindDoxygen.cmake:646 (find_package_handle_standard_args)
[INFO] [stderr]     wrappers/CMakeLists.txt:1 (find_package)
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' panicked at '
[INFO] [stderr]   command did not execute successfully, got: exit status: 1
[INFO] [stderr] 
[INFO] [stderr]   build script failed, must exit now', /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/cmake-0.1.44/src/lib.rs:885:5
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x55e2847e69da - std::backtrace_rs::backtrace::libunwind::trace::h2f05d0192276a8f6
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5
[INFO] [stderr]      1:     0x55e2847e69da - std::backtrace_rs::backtrace::trace_unsynchronized::hedc23dff7a1af150
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stderr]      2:     0x55e2847e69da - std::sys_common::backtrace::_print_fmt::h17541ef7592f3ce2
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/sys_common/backtrace.rs:65:5
[INFO] [stderr]      3:     0x55e2847e69da - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::h20f75df5ab0c0792
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/sys_common/backtrace.rs:44:22
[INFO] [stderr]      4:     0x55e2848074cf - core::fmt::write::h78109e6f466b3af6
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/core/src/fmt/mod.rs:1254:17
[INFO] [stderr]      5:     0x55e2847e3ae5 - std::io::Write::write_fmt::hc59e1b02dd273c8a
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/io/mod.rs:1698:15
[INFO] [stderr]      6:     0x55e2847e67a5 - std::sys_common::backtrace::_print::h8dac57a9f8fbf9a5
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/sys_common/backtrace.rs:47:5
[INFO] [stderr]      7:     0x55e2847e67a5 - std::sys_common::backtrace::print::hf9ecbf41d1aa712f
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/sys_common/backtrace.rs:34:9
[INFO] [stderr]      8:     0x55e2847e7f4e - std::panicking::default_hook::{{closure}}::h04c07acfc84ca028
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/panicking.rs:269:22
[INFO] [stderr]      9:     0x55e2847e7cf5 - std::panicking::default_hook::h01f6bb23e1eceb2c
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/panicking.rs:288:9
[INFO] [stderr]     10:     0x55e2847e84ae - std::panicking::rust_panic_with_hook::h2bb3722bbaf2f6df
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/panicking.rs:691:13
[INFO] [stderr]     11:     0x55e2847e83a9 - std::panicking::begin_panic_handler::{{closure}}::h91bc7f36a4be011b
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/panicking.rs:582:13
[INFO] [stderr]     12:     0x55e2847e6e46 - std::sys_common::backtrace::__rust_end_short_backtrace::h8b3d3717114f9e59
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/sys_common/backtrace.rs:150:18
[INFO] [stderr]     13:     0x55e2847e8102 - rust_begin_unwind
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/panicking.rs:578:5
[INFO] [stderr]     14:     0x55e28477c813 - core::panicking::panic_fmt::hfd368e3fbdabea26
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/core/src/panicking.rs:67:14
[INFO] [stderr]     15:     0x55e28478986f - cmake::fail::h7a35575b35b2f2a6
[INFO] [stderr]     16:     0x55e2847892d3 - cmake::run::hde8ce22631e7f8f6
[INFO] [stderr]     17:     0x55e284785a22 - cmake::Config::build::h1373286ae916905f
[INFO] [stderr]     18:     0x55e28477f665 - build_script_build::main::h428cd20b3d67bc25
[INFO] [stderr]     19:     0x55e2847823c3 - core::ops::function::FnOnce::call_once::h36c2a0e1c1ad1021
[INFO] [stderr]     20:     0x55e284780b46 - std::sys_common::backtrace::__rust_begin_short_backtrace::hc31889017dc8210d
[INFO] [stderr]     21:     0x55e284780b99 - std::rt::lang_start::{{closure}}::hd78ae28433e6af66
[INFO] [stderr]     22:     0x55e2847dffae - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::h2eb19b8ce4148df4
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/core/src/ops/function.rs:287:13
[INFO] [stderr]     23:     0x55e2847dffae - std::panicking::try::do_call::h2e900feff5d504c5
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/panicking.rs:485:40
[INFO] [stderr]     24:     0x55e2847dffae - std::panicking::try::h8854836cb85aa9f2
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/panicking.rs:449:19
[INFO] [stderr]     25:     0x55e2847dffae - std::panic::catch_unwind::h706025dd4c48f64b
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/panic.rs:140:14
[INFO] [stderr]     26:     0x55e2847dffae - std::rt::lang_start_internal::{{closure}}::h7be5b97f4a07a91a
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/rt.rs:148:48
[INFO] [stderr]     27:     0x55e2847dffae - std::panicking::try::do_call::h59847e9d0a176965
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/panicking.rs:485:40
[INFO] [stderr]     28:     0x55e2847dffae - std::panicking::try::h399a918ba8522823
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/panicking.rs:449:19
[INFO] [stderr]     29:     0x55e2847dffae - std::panic::catch_unwind::hca7ca6c55b2a2e26
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/panic.rs:140:14
[INFO] [stderr]     30:     0x55e2847dffae - std::rt::lang_start_internal::h2c807a81560459eb
[INFO] [stderr]                                  at /rustc/1b7dd2252b99671ce5d1cb9664c5f8636329436d/library/std/src/rt.rs:148:20
[INFO] [stderr]     31:     0x55e284780b77 - std::rt::lang_start::h3cb420c07bf2381c
[INFO] [stderr]     32:     0x55e2847800e5 - main
[INFO] [stderr]     33:     0x7fef517ded90 - <unknown>
[INFO] [stderr]     34:     0x7fef517dee40 - __libc_start_main
[INFO] [stderr]     35:     0x55e28477cd45 - _start
[INFO] [stderr]     36:                0x0 - <unknown>
[INFO] running `Command { std: "docker" "inspect" "02440239ab2c460751c04f6721076bafb5a51cc528d3fb63a4291f07410c2d90", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "02440239ab2c460751c04f6721076bafb5a51cc528d3fb63a4291f07410c2d90", kill_on_drop: false }`
[INFO] [stdout] 02440239ab2c460751c04f6721076bafb5a51cc528d3fb63a4291f07410c2d90
