[INFO] fetching crate bioutils 0.2.4...
[INFO] documenting bioutils-0.2.4 against beta-2022-05-20 for beta-1.62-rustdoc-1
[INFO] extracting crate bioutils 0.2.4 into /workspace/builds/worker-100/source
[INFO] validating manifest of crates.io crate bioutils 0.2.4 on toolchain beta-2022-05-20
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-05-20" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate bioutils 0.2.4
[INFO] finished tweaking crates.io crate bioutils 0.2.4
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[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-05-20" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-05-20" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-100/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-100/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-05-20" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "inspect" "f6438000d1c5eb2c828963941b2148a019e054297e562609d5bead65294bae76", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f6438000d1c5eb2c828963941b2148a019e054297e562609d5bead65294bae76", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-100/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-100/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-05-20" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] cc6b2d8866d9a242fd24cd5f3ab88c5a215cc49165bfa27a099a7d69d50217b1
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[INFO] [stderr]  Documenting bioutils v0.2.4 (/opt/rustwide/workdir)
[INFO] [stdout] warning: Rust code block is empty
[INFO] [stdout]   --> src/files/http.rs:3:5
[INFO] [stdout]    |
[INFO] [stdout] 3  |   //! ```
[INFO] [stdout]    |  _____^
[INFO] [stdout] 4  | | //! // use std::path::Path;
[INFO] [stdout] 5  | | //! // use bioutils::files::http::bioutils_curl;
[INFO] [stdout] 6  | | //! // let fastq_ftp = "ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR170/009/SRR1700869/";
[INFO] [stdout] ...  |
[INFO] [stdout] 9  | | //! // bioutils_curl(fastq_ftp, fastq_gz, &out_directory);    
[INFO] [stdout] 10 | | //! ```
[INFO] [stdout]    | |_______^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(rustdoc::invalid_rust_codeblocks)]` on by default
[INFO] [stdout] help: mark blocks that do not contain Rust code as text
[INFO] [stdout]    |
[INFO] [stdout] 3  | //! ```text
[INFO] [stdout]    |        ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: Rust code block is empty
[INFO] [stdout]  --> src/utils/count.rs:3:5
[INFO] [stdout]   |
[INFO] [stdout] 3 |   //! ```
[INFO] [stdout]   |  _____^
[INFO] [stdout] 4 | | //! // Counts the number of elements greater, less, and equal to the given value in the item
[INFO] [stdout] 5 | | //! // Use this to count the number of elements that pass (greater than or equal to) a threshold value
[INFO] [stdout] 6 | | //! 
[INFO] [stdout] 7 | | //! ```
[INFO] [stdout]   | |_______^
[INFO] [stdout]   |
[INFO] [stdout] help: mark blocks that do not contain Rust code as text
[INFO] [stdout]   |
[INFO] [stdout] 3 | //! ```text
[INFO] [stdout]   |        ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: Rust code block is empty
[INFO] [stdout]   --> src/references/ftp.rs:6:5
[INFO] [stdout]    |
[INFO] [stdout] 6  |   //! ```
[INFO] [stdout]    |  _____^
[INFO] [stdout] 7  | | //! // use std::path::Path;
[INFO] [stdout] 8  | | //! // let path = Path::new("./");
[INFO] [stdout] 9  | | //! // Downloads the latest file versions
[INFO] [stdout] 10 | | //! // download_grch38_primary_assembly_genome_fa_gz(&path);
[INFO] [stdout] 11 | | //! // download_gencode_vxx_primary_assembly_annotation_gtf_gz(&path);
[INFO] [stdout] 12 | | //! ```
[INFO] [stdout]    | |_______^
[INFO] [stdout]    |
[INFO] [stdout] help: mark blocks that do not contain Rust code as text
[INFO] [stdout]    |
[INFO] [stdout] 6  | //! ```text
[INFO] [stdout]    |        ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 26.23s
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[INFO] running `Command { std: "docker" "rm" "-f" "cc6b2d8866d9a242fd24cd5f3ab88c5a215cc49165bfa27a099a7d69d50217b1", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-100/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-100/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "DOCS_RS=1" "-e" "RUSTC_BOOTSTRAP=1" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-05-20" "rustdoc" "--lib" "-Zrustdoc-map" "--frozen" "--message-format=json" "--" "-Z" "unstable-options" "--document-private-items", kill_on_drop: false }`
[INFO] [stdout] 95f0e108f7b4902c3993a41e530fc0a675275d08bde48c12f2374dc267128dbe
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[INFO] [stderr]    Compiling num-rational v0.3.2
[INFO] [stderr]     Checking url v2.2.2
[INFO] [stderr]     Checking png v0.16.8
[INFO] [stderr]     Checking flate2 v1.0.24
[INFO] [stderr]     Checking crossbeam-channel v0.5.4
[INFO] [stderr]    Compiling quote v1.0.18
[INFO] [stderr]     Checking buf_redux v0.8.4
[INFO] [stderr]     Checking aho-corasick v0.7.18
[INFO] [stderr]     Checking socket2 v0.4.4
[INFO] [stderr]     Checking mio v0.8.3
[INFO] [stderr]     Checking num_cpus v1.13.1
[INFO] [stderr]     Checking getrandom v0.2.6
[INFO] [stderr]     Checking memchr v0.1.11
[INFO] [stderr]     Checking thread-id v2.0.0
[INFO] [stderr]     Checking time v0.1.43
[INFO] [stderr]     Checking crossbeam-deque v0.8.1
[INFO] [stderr]     Checking aho-corasick v0.5.3
[INFO] [stderr]     Checking thread_local v0.2.7
[INFO] [stderr]     Checking rand_core v0.6.3
[INFO] [stderr]     Checking crossbeam v0.8.1
[INFO] [stderr]     Checking tokio v1.18.2
[INFO] [stderr]     Checking regex v0.1.80
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking regex v1.5.6
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking sacabase v2.0.0
[INFO] [stderr]     Checking suffix_array v0.5.0
[INFO] [stderr]     Checking num v0.1.42
[INFO] [stderr]     Checking chrono v0.2.25
[INFO] [stderr]     Checking serde_urlencoded v0.7.1
[INFO] [stderr]     Checking ftp v3.0.1
[INFO] [stderr]     Checking jpeg-decoder v0.1.22
[INFO] [stderr]     Checking tiff v0.6.1
[INFO] [stderr]     Checking image v0.23.14
[INFO] [stderr]    Compiling tracing-attributes v0.1.21
[INFO] [stderr]    Compiling openssl-macros v0.1.0
[INFO] [stderr]     Checking tracing v0.1.34
[INFO] [stderr]     Checking tokio-util v0.7.2
[INFO] [stderr]     Checking h2 v0.3.13
[INFO] [stderr]     Checking seq_io v0.3.1
[INFO] [stderr]     Checking tokio-native-tls v0.3.0
[INFO] [stderr]     Checking hyper v0.14.19
[INFO] [stderr]     Checking hyper-tls v0.5.0
[INFO] [stderr]     Checking reqwest v0.11.10
[INFO] [stderr]  Documenting bioutils v0.2.4 (/opt/rustwide/workdir)
[INFO] [stdout] warning: Rust code block is empty
[INFO] [stdout]   --> src/files/http.rs:3:5
[INFO] [stdout]    |
[INFO] [stdout] 3  |   //! ```
[INFO] [stdout]    |  _____^
[INFO] [stdout] 4  | | //! // use std::path::Path;
[INFO] [stdout] 5  | | //! // use bioutils::files::http::bioutils_curl;
[INFO] [stdout] 6  | | //! // let fastq_ftp = "ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR170/009/SRR1700869/";
[INFO] [stdout] ...  |
[INFO] [stdout] 9  | | //! // bioutils_curl(fastq_ftp, fastq_gz, &out_directory);    
[INFO] [stdout] 10 | | //! ```
[INFO] [stdout]    | |_______^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(rustdoc::invalid_rust_codeblocks)]` on by default
[INFO] [stdout] help: mark blocks that do not contain Rust code as text
[INFO] [stdout]    |
[INFO] [stdout] 3  | //! ```text
[INFO] [stdout]    |        ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: Rust code block is empty
[INFO] [stdout]  --> src/utils/count.rs:3:5
[INFO] [stdout]   |
[INFO] [stdout] 3 |   //! ```
[INFO] [stdout]   |  _____^
[INFO] [stdout] 4 | | //! // Counts the number of elements greater, less, and equal to the given value in the item
[INFO] [stdout] 5 | | //! // Use this to count the number of elements that pass (greater than or equal to) a threshold value
[INFO] [stdout] 6 | | //! 
[INFO] [stdout] 7 | | //! ```
[INFO] [stdout]   | |_______^
[INFO] [stdout]   |
[INFO] [stdout] help: mark blocks that do not contain Rust code as text
[INFO] [stdout]   |
[INFO] [stdout] 3 | //! ```text
[INFO] [stdout]   |        ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: Rust code block is empty
[INFO] [stdout]   --> src/references/ftp.rs:6:5
[INFO] [stdout]    |
[INFO] [stdout] 6  |   //! ```
[INFO] [stdout]    |  _____^
[INFO] [stdout] 7  | | //! // use std::path::Path;
[INFO] [stdout] 8  | | //! // let path = Path::new("./");
[INFO] [stdout] 9  | | //! // Downloads the latest file versions
[INFO] [stdout] 10 | | //! // download_grch38_primary_assembly_genome_fa_gz(&path);
[INFO] [stdout] 11 | | //! // download_gencode_vxx_primary_assembly_annotation_gtf_gz(&path);
[INFO] [stdout] 12 | | //! ```
[INFO] [stdout]    | |_______^
[INFO] [stdout]    |
[INFO] [stdout] help: mark blocks that do not contain Rust code as text
[INFO] [stdout]    |
[INFO] [stdout] 6  | //! ```text
[INFO] [stdout]    |        ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 30.40s
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "95f0e108f7b4902c3993a41e530fc0a675275d08bde48c12f2374dc267128dbe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "95f0e108f7b4902c3993a41e530fc0a675275d08bde48c12f2374dc267128dbe", kill_on_drop: false }`
[INFO] [stdout] 95f0e108f7b4902c3993a41e530fc0a675275d08bde48c12f2374dc267128dbe