[INFO] fetching crate bio_edit 0.1.1...
[INFO] documenting bio_edit-0.1.1 against beta-2022-05-20 for beta-1.62-rustdoc-1
[INFO] extracting crate bio_edit 0.1.1 into /workspace/builds/worker-26/source
[INFO] validating manifest of crates.io crate bio_edit 0.1.1 on toolchain beta-2022-05-20
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-05-20" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate bio_edit 0.1.1
[INFO] finished tweaking crates.io crate bio_edit 0.1.1
[INFO] tweaked toml for crates.io crate bio_edit 0.1.1 written to /workspace/builds/worker-26/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-05-20" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-05-20" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-05-20" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 7925e640b6846f8c314ee80b5d4cb5ed21d9e721d9819314c6bb934bc00cfd9b
[INFO] running `Command { std: "docker" "start" "-a" "7925e640b6846f8c314ee80b5d4cb5ed21d9e721d9819314c6bb934bc00cfd9b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "7925e640b6846f8c314ee80b5d4cb5ed21d9e721d9819314c6bb934bc00cfd9b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7925e640b6846f8c314ee80b5d4cb5ed21d9e721d9819314c6bb934bc00cfd9b", kill_on_drop: false }`
[INFO] [stdout] 7925e640b6846f8c314ee80b5d4cb5ed21d9e721d9819314c6bb934bc00cfd9b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-05-20" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 4a688c6d888e485fd7405690edb23a3f7d9ab38ac8c1c007609e05f094f939dc
[INFO] running `Command { std: "docker" "start" "-a" "4a688c6d888e485fd7405690edb23a3f7d9ab38ac8c1c007609e05f094f939dc", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.39
[INFO] [stderr]    Compiling syn v1.0.95
[INFO] [stderr]    Compiling rustversion v1.0.6
[INFO] [stderr]    Compiling unicode-segmentation v1.9.0
[INFO] [stderr]     Checking regex-syntax v0.6.26
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking memchr v2.5.0
[INFO] [stderr]     Checking bit-set v0.5.2
[INFO] [stderr]    Compiling heck v0.3.3
[INFO] [stderr]     Checking aho-corasick v0.7.18
[INFO] [stderr]    Compiling quote v1.0.18
[INFO] [stderr]     Checking regex v1.5.6
[INFO] [stderr]    Compiling thiserror-impl v1.0.31
[INFO] [stderr]    Compiling strum_macros v0.23.1
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]     Checking thiserror v1.0.31
[INFO] [stderr]     Checking bio-types v0.12.1
[INFO] [stderr]  Documenting bio_edit v0.1.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 9.61s
[INFO] [stdout] warning: `i32` is both a module and a builtin type
[INFO] [stdout]    --> src/alignment/pairwise/mod.rs:910:28
[INFO] [stdout]     |
[INFO] [stdout] 910 |     /// * `gap_open_fn` - [i32]
[INFO] [stdout]     |                            ^^^ ambiguous link
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(rustdoc::broken_intra_doc_links)]` on by default
[INFO] [stdout] help: to link to the module, prefix with `mod@`
[INFO] [stdout]     |
[INFO] [stdout] 910 |     /// * `gap_open_fn` - [mod@i32]
[INFO] [stdout]     |                            ++++
[INFO] [stdout] help: to link to the builtin type, prefix with `prim@`
[INFO] [stdout]     |
[INFO] [stdout] 910 |     /// * `gap_open_fn` - [prim@i32]
[INFO] [stdout]     |                            +++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: `i32` is both a module and a builtin type
[INFO] [stdout]    --> src/alignment/pairwise/mod.rs:911:30
[INFO] [stdout]     |
[INFO] [stdout] 911 |     /// * `gap_extend_fn` - [i32]
[INFO] [stdout]     |                              ^^^ ambiguous link
[INFO] [stdout]     |
[INFO] [stdout] help: to link to the module, prefix with `mod@`
[INFO] [stdout]     |
[INFO] [stdout] 911 |     /// * `gap_extend_fn` - [mod@i32]
[INFO] [stdout]     |                              ++++
[INFO] [stdout] help: to link to the builtin type, prefix with `prim@`
[INFO] [stdout]     |
[INFO] [stdout] 911 |     /// * `gap_extend_fn` - [prim@i32]
[INFO] [stdout]     |                              +++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "4a688c6d888e485fd7405690edb23a3f7d9ab38ac8c1c007609e05f094f939dc", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4a688c6d888e485fd7405690edb23a3f7d9ab38ac8c1c007609e05f094f939dc", kill_on_drop: false }`
[INFO] [stdout] 4a688c6d888e485fd7405690edb23a3f7d9ab38ac8c1c007609e05f094f939dc
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTC_BOOTSTRAP=1" "-e" "DOCS_RS=1" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-05-20" "rustdoc" "--lib" "-Zrustdoc-map" "--frozen" "--message-format=json" "--" "-Z" "unstable-options" "--document-private-items", kill_on_drop: false }`
[INFO] [stdout] a295c80d5dc502583efe82d4cc09d30bb2d93ad9879f3c3a731acd7d10b03bfa
[INFO] running `Command { std: "docker" "start" "-a" "a295c80d5dc502583efe82d4cc09d30bb2d93ad9879f3c3a731acd7d10b03bfa", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.39
[INFO] [stderr]    Compiling unicode-ident v1.0.0
[INFO] [stderr]    Compiling syn v1.0.95
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling rustversion v1.0.6
[INFO] [stderr]    Compiling unicode-segmentation v1.9.0
[INFO] [stderr]     Checking regex-syntax v0.6.26
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking bit-set v0.5.2
[INFO] [stderr]    Compiling heck v0.3.3
[INFO] [stderr]    Compiling quote v1.0.18
[INFO] [stderr]     Checking aho-corasick v0.7.18
[INFO] [stderr]     Checking regex v1.5.6
[INFO] [stderr]    Compiling thiserror-impl v1.0.31
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling strum_macros v0.23.1
[INFO] [stderr]     Checking thiserror v1.0.31
[INFO] [stderr]     Checking bio-types v0.12.1
[INFO] [stderr]  Documenting bio_edit v0.1.1 (/opt/rustwide/workdir)
[INFO] [stdout] warning: `i32` is both a module and a builtin type
[INFO] [stdout]    --> src/alignment/pairwise/mod.rs:910:28
[INFO] [stdout]     |
[INFO] [stdout] 910 |     /// * `gap_open_fn` - [i32]
[INFO] [stdout]     |                            ^^^ ambiguous link
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(rustdoc::broken_intra_doc_links)]` on by default
[INFO] [stdout] help: to link to the module, prefix with `mod@`
[INFO] [stdout]     |
[INFO] [stdout] 910 |     /// * `gap_open_fn` - [mod@i32]
[INFO] [stdout]     |                            ++++
[INFO] [stdout] help: to link to the builtin type, prefix with `prim@`
[INFO] [stdout]     |
[INFO] [stdout] 910 |     /// * `gap_open_fn` - [prim@i32]
[INFO] [stdout]     |                            +++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: `i32` is both a module and a builtin type
[INFO] [stdout]    --> src/alignment/pairwise/mod.rs:911:30
[INFO] [stdout]     |
[INFO] [stdout] 911 |     /// * `gap_extend_fn` - [i32]
[INFO] [stdout]     |                              ^^^ ambiguous link
[INFO] [stdout]     |
[INFO] [stdout] help: to link to the module, prefix with `mod@`
[INFO] [stdout]     |
[INFO] [stdout] 911 |     /// * `gap_extend_fn` - [mod@i32]
[INFO] [stdout]     |                              ++++
[INFO] [stdout] help: to link to the builtin type, prefix with `prim@`
[INFO] [stdout]     |
[INFO] [stdout] 911 |     /// * `gap_extend_fn` - [prim@i32]
[INFO] [stdout]     |                              +++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 9.12s
[INFO] running `Command { std: "docker" "inspect" "a295c80d5dc502583efe82d4cc09d30bb2d93ad9879f3c3a731acd7d10b03bfa", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a295c80d5dc502583efe82d4cc09d30bb2d93ad9879f3c3a731acd7d10b03bfa", kill_on_drop: false }`
[INFO] [stdout] a295c80d5dc502583efe82d4cc09d30bb2d93ad9879f3c3a731acd7d10b03bfa