[INFO] fetching crate vdj_ann 0.4.4...
[INFO] documenting vdj_ann-0.4.4 against 1.61.0 for beta-1.62-rustdoc-1
[INFO] extracting crate vdj_ann 0.4.4 into /workspace/builds/worker-33/source
[INFO] validating manifest of crates.io crate vdj_ann 0.4.4 on toolchain 1.61.0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.61.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate vdj_ann 0.4.4
[INFO] finished tweaking crates.io crate vdj_ann 0.4.4
[INFO] tweaked toml for crates.io crate vdj_ann 0.4.4 written to /workspace/builds/worker-33/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.61.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.61.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded string_utils v0.1.4
[INFO] [stderr]   Downloaded wyhash v0.5.0
[INFO] [stderr]   Downloaded amino v0.1.7
[INFO] [stderr]   Downloaded align_tools v0.1.12
[INFO] [stderr]   Downloaded vector_utils v0.1.5
[INFO] [stderr]   Downloaded graph_simple v0.1.5
[INFO] [stderr]   Downloaded bio_edit v0.1.1
[INFO] [stderr]   Downloaded boomphf v0.5.9
[INFO] [stderr]   Downloaded vdj_types v0.2.0
[INFO] [stderr]   Downloaded kmer_lookup v0.1.5
[INFO] [stderr]   Downloaded equiv v0.1.3
[INFO] [stderr]   Downloaded hyperbase v0.1.8
[INFO] [stderr]   Downloaded io_utils v0.3.2
[INFO] [stderr]   Downloaded stats_utils v0.1.3
[INFO] [stderr]   Downloaded fasta_tools v0.1.8
[INFO] [stderr]   Downloaded debruijn v0.3.4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-33/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-33/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+1.61.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 1b6344f78af32ce8f834e2eb2c12045d0f489a64e6dc202d3ab734edcd9c7e07
[INFO] running `Command { std: "docker" "start" "-a" "1b6344f78af32ce8f834e2eb2c12045d0f489a64e6dc202d3ab734edcd9c7e07", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "1b6344f78af32ce8f834e2eb2c12045d0f489a64e6dc202d3ab734edcd9c7e07", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1b6344f78af32ce8f834e2eb2c12045d0f489a64e6dc202d3ab734edcd9c7e07", kill_on_drop: false }`
[INFO] [stdout] 1b6344f78af32ce8f834e2eb2c12045d0f489a64e6dc202d3ab734edcd9c7e07
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-33/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-33/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+1.61.0" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 59cd19a61d172d919047a36e2efc76d538b77475cf5aec2fca711b237c15f293
[INFO] running `Command { std: "docker" "start" "-a" "59cd19a61d172d919047a36e2efc76d538b77475cf5aec2fca711b237c15f293", kill_on_drop: false }`
[INFO] [stderr]    Compiling autocfg v1.1.0
[INFO] [stderr]    Compiling proc-macro2 v1.0.39
[INFO] [stderr]    Compiling unicode-ident v1.0.0
[INFO] [stderr]    Compiling syn v1.0.95
[INFO] [stderr]    Compiling libc v0.2.126
[INFO] [stderr]    Compiling serde_derive v1.0.137
[INFO] [stderr]    Compiling crossbeam-utils v0.8.8
[INFO] [stderr]    Compiling serde v1.0.137
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]     Checking permutation v0.2.5
[INFO] [stderr]     Checking superslice v1.0.0
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]     Checking either v1.6.1
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]    Compiling serde_json v1.0.81
[INFO] [stderr]     Checking ryu v1.0.10
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]     Checking itoa v1.0.2
[INFO] [stderr]    Compiling rustversion v1.0.6
[INFO] [stderr]    Compiling cc v1.0.73
[INFO] [stderr]     Checking smallvec v1.8.0
[INFO] [stderr]    Compiling unicode-segmentation v1.9.0
[INFO] [stderr]    Compiling crc32fast v1.3.2
[INFO] [stderr]     Checking adler v1.0.2
[INFO] [stderr]     Checking regex-syntax v0.6.26
[INFO] [stderr]     Checking hashbrown v0.11.2
[INFO] [stderr]     Checking fixedbitset v0.4.1
[INFO] [stderr]     Checking equiv v0.1.3
[INFO] [stderr]     Checking stats_utils v0.1.3
[INFO] [stderr]    Compiling rayon-core v1.9.3
[INFO] [stderr]     Checking wyhash v0.5.0
[INFO] [stderr]     Checking vector_utils v0.1.5
[INFO] [stderr]     Checking itertools v0.10.3
[INFO] [stderr]     Checking miniz_oxide v0.5.3
[INFO] [stderr]     Checking bit-set v0.5.2
[INFO] [stderr]     Checking string_utils v0.1.4
[INFO] [stderr]    Compiling memoffset v0.6.5
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.8
[INFO] [stderr]    Compiling rayon v1.5.3
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling indexmap v1.8.2
[INFO] [stderr]    Compiling heck v0.3.3
[INFO] [stderr]     Checking crossbeam-channel v0.5.4
[INFO] [stderr]     Checking flate2 v1.0.24
[INFO] [stderr]     Checking aho-corasick v0.7.18
[INFO] [stderr]    Compiling quote v1.0.18
[INFO] [stderr]    Compiling lz4-sys v1.9.3
[INFO] [stderr]     Checking num_cpus v1.13.1
[INFO] [stderr]     Checking crossbeam-deque v0.8.1
[INFO] [stderr]     Checking petgraph v0.6.2
[INFO] [stderr]     Checking regex v1.5.6
[INFO] [stderr]     Checking graph_simple v0.1.5
[INFO] [stderr]    Compiling thiserror-impl v1.0.31
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling strum_macros v0.23.1
[INFO] [stderr]     Checking thiserror v1.0.31
[INFO] [stderr]     Checking bio-types v0.12.1
[INFO] [stderr]     Checking bio_edit v0.1.1
[INFO] [stderr]     Checking boomphf v0.5.9
[INFO] [stderr]     Checking bincode v1.3.3
[INFO] [stderr]     Checking vdj_types v0.2.0
[INFO] [stderr]     Checking debruijn v0.3.4
[INFO] [stderr]     Checking lz4 v1.23.3
[INFO] [stderr]     Checking io_utils v0.3.2
[INFO] [stderr]     Checking kmer_lookup v0.1.5
[INFO] [stderr]     Checking amino v0.1.7
[INFO] [stderr]     Checking align_tools v0.1.12
[INFO] [stderr]     Checking fasta_tools v0.1.8
[INFO] [stderr]     Checking hyperbase v0.1.8
[INFO] [stderr]  Documenting vdj_ann v0.4.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 12.90s
[INFO] running `Command { std: "docker" "inspect" "59cd19a61d172d919047a36e2efc76d538b77475cf5aec2fca711b237c15f293", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "59cd19a61d172d919047a36e2efc76d538b77475cf5aec2fca711b237c15f293", kill_on_drop: false }`
[INFO] [stdout] 59cd19a61d172d919047a36e2efc76d538b77475cf5aec2fca711b237c15f293
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-33/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-33/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTC_BOOTSTRAP=1" "-e" "DOCS_RS=1" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+1.61.0" "rustdoc" "--lib" "-Zrustdoc-map" "--frozen" "--message-format=json" "--" "-Z" "unstable-options" "--document-private-items", kill_on_drop: false }`
[INFO] [stdout] 7d9953ee8e4ab4924d06e84e960b9f2c69f91a22d7d9b4d7513c1a174d46781d
[INFO] running `Command { std: "docker" "start" "-a" "7d9953ee8e4ab4924d06e84e960b9f2c69f91a22d7d9b4d7513c1a174d46781d", kill_on_drop: false }`
[INFO] [stderr]    Compiling autocfg v1.1.0
[INFO] [stderr]    Compiling proc-macro2 v1.0.39
[INFO] [stderr]    Compiling unicode-ident v1.0.0
[INFO] [stderr]    Compiling syn v1.0.95
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]    Compiling libc v0.2.126
[INFO] [stderr]    Compiling serde_derive v1.0.137
[INFO] [stderr]    Compiling crossbeam-utils v0.8.8
[INFO] [stderr]    Compiling serde v1.0.137
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]    Compiling rayon-core v1.9.3
[INFO] [stderr]     Checking superslice v1.0.0
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]     Checking either v1.6.1
[INFO] [stderr]     Checking permutation v0.2.5
[INFO] [stderr]    Compiling serde_json v1.0.81
[INFO] [stderr]     Checking rand_core v0.6.3
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]     Checking ryu v1.0.10
[INFO] [stderr]     Checking itoa v1.0.2
[INFO] [stderr]    Compiling cc v1.0.73
[INFO] [stderr]     Checking smallvec v1.8.0
[INFO] [stderr]    Compiling rustversion v1.0.6
[INFO] [stderr]    Compiling unicode-segmentation v1.9.0
[INFO] [stderr]    Compiling crc32fast v1.3.2
[INFO] [stderr]     Checking hashbrown v0.11.2
[INFO] [stderr]     Checking adler v1.0.2
[INFO] [stderr]     Checking regex-syntax v0.6.26
[INFO] [stderr]     Checking fixedbitset v0.4.1
[INFO] [stderr]     Checking equiv v0.1.3
[INFO] [stderr]     Checking stats_utils v0.1.3
[INFO] [stderr]    Compiling heck v0.3.3
[INFO] [stderr]    Compiling memoffset v0.6.5
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.8
[INFO] [stderr]    Compiling rayon v1.5.3
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling indexmap v1.8.2
[INFO] [stderr]     Checking miniz_oxide v0.5.3
[INFO] [stderr]     Checking wyhash v0.5.0
[INFO] [stderr]     Checking itertools v0.10.3
[INFO] [stderr]     Checking vector_utils v0.1.5
[INFO] [stderr]     Checking bit-set v0.5.2
[INFO] [stderr]    Compiling quote v1.0.18
[INFO] [stderr]     Checking string_utils v0.1.4
[INFO] [stderr]     Checking crossbeam-channel v0.5.4
[INFO] [stderr]     Checking flate2 v1.0.24
[INFO] [stderr]    Compiling lz4-sys v1.9.3
[INFO] [stderr]     Checking crossbeam-deque v0.8.1
[INFO] [stderr]     Checking petgraph v0.6.2
[INFO] [stderr]     Checking aho-corasick v0.7.18
[INFO] [stderr]     Checking num_cpus v1.13.1
[INFO] [stderr]     Checking regex v1.5.6
[INFO] [stderr]     Checking graph_simple v0.1.5
[INFO] [stderr]    Compiling thiserror-impl v1.0.31
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling strum_macros v0.23.1
[INFO] [stderr]     Checking thiserror v1.0.31
[INFO] [stderr]     Checking bio-types v0.12.1
[INFO] [stderr]     Checking bio_edit v0.1.1
[INFO] [stderr]     Checking boomphf v0.5.9
[INFO] [stderr]     Checking bincode v1.3.3
[INFO] [stderr]     Checking vdj_types v0.2.0
[INFO] [stderr]     Checking debruijn v0.3.4
[INFO] [stderr]     Checking kmer_lookup v0.1.5
[INFO] [stderr]     Checking amino v0.1.7
[INFO] [stderr]     Checking align_tools v0.1.12
[INFO] [stderr]     Checking lz4 v1.23.3
[INFO] [stderr]     Checking hyperbase v0.1.8
[INFO] [stderr]     Checking io_utils v0.3.2
[INFO] [stderr]     Checking fasta_tools v0.1.8
[INFO] [stderr]  Documenting vdj_ann v0.4.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 22.35s
[INFO] running `Command { std: "docker" "inspect" "7d9953ee8e4ab4924d06e84e960b9f2c69f91a22d7d9b4d7513c1a174d46781d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7d9953ee8e4ab4924d06e84e960b9f2c69f91a22d7d9b4d7513c1a174d46781d", kill_on_drop: false }`
[INFO] [stdout] 7d9953ee8e4ab4924d06e84e960b9f2c69f91a22d7d9b4d7513c1a174d46781d