[INFO] cloning repository https://github.com/ban-m/partial_order_alignment
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/ban-m/partial_order_alignment" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fban-m%2Fpartial_order_alignment", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fban-m%2Fpartial_order_alignment'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] b434418447aad843e9267f616a0b609d2da4c38a
[INFO] documenting ban-m/partial_order_alignment against 1.61.0 for beta-1.62-rustdoc-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fban-m%2Fpartial_order_alignment" "/workspace/builds/worker-19/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-19/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/ban-m/partial_order_alignment on toolchain 1.61.0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.61.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/ban-m/partial_order_alignment
[INFO] finished tweaking git repo https://github.com/ban-m/partial_order_alignment
[INFO] tweaked toml for git repo https://github.com/ban-m/partial_order_alignment written to /workspace/builds/worker-19/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.61.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.61.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded packed_simd_2 v0.3.7
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+1.61.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 8c0c05b1f417f93fab2908700249f71d17ac28d749147261e6aef971bc4b440a
[INFO] running `Command { std: "docker" "start" "-a" "8c0c05b1f417f93fab2908700249f71d17ac28d749147261e6aef971bc4b440a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "8c0c05b1f417f93fab2908700249f71d17ac28d749147261e6aef971bc4b440a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8c0c05b1f417f93fab2908700249f71d17ac28d749147261e6aef971bc4b440a", kill_on_drop: false }`
[INFO] [stdout] 8c0c05b1f417f93fab2908700249f71d17ac28d749147261e6aef971bc4b440a
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+1.61.0" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 30267e8152326e409a2a31bae2b90e74413aa63e79bd02384e13ef64ee5c5d36
[INFO] running `Command { std: "docker" "start" "-a" "30267e8152326e409a2a31bae2b90e74413aa63e79bd02384e13ef64ee5c5d36", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.126
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]     Checking ppv-lite86 v0.2.16
[INFO] [stderr]     Checking getrandom v0.2.6
[INFO] [stderr]     Checking rand_core v0.6.3
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking rand_xoshiro v0.6.0
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]  Documenting poa_hmm v0.2.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unresolved link to `base`
[INFO] [stdout]    --> src/config.rs:114:65
[INFO] [stdout]     |
[INFO] [stdout] 114 |     /// ,which generate each base (A, T, G, and C) by base_freq[base].
[INFO] [stdout]     |                                                                 ^^^^ no item named `base` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(rustdoc::broken_intra_doc_links)]` on by default
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 4.01s
[INFO] running `Command { std: "docker" "inspect" "30267e8152326e409a2a31bae2b90e74413aa63e79bd02384e13ef64ee5c5d36", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "30267e8152326e409a2a31bae2b90e74413aa63e79bd02384e13ef64ee5c5d36", kill_on_drop: false }`
[INFO] [stdout] 30267e8152326e409a2a31bae2b90e74413aa63e79bd02384e13ef64ee5c5d36
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "DOCS_RS=1" "-e" "RUSTC_BOOTSTRAP=1" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+1.61.0" "rustdoc" "--lib" "-Zrustdoc-map" "--frozen" "--message-format=json" "--" "-Z" "unstable-options" "--document-private-items", kill_on_drop: false }`
[INFO] [stdout] 979cc0f93205c12722bceab8ce794f3b49802b6f865dd751efd040b3187dc1f3
[INFO] running `Command { std: "docker" "start" "-a" "979cc0f93205c12722bceab8ce794f3b49802b6f865dd751efd040b3187dc1f3", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.126
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]     Checking ppv-lite86 v0.2.16
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]     Checking getrandom v0.2.6
[INFO] [stderr]     Checking rand_core v0.6.3
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking rand_xoshiro v0.6.0
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]  Documenting poa_hmm v0.2.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unresolved link to `base`
[INFO] [stdout]    --> src/config.rs:114:65
[INFO] [stdout]     |
[INFO] [stdout] 114 |     /// ,which generate each base (A, T, G, and C) by base_freq[base].
[INFO] [stdout]     |                                                                 ^^^^ no item named `base` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(rustdoc::broken_intra_doc_links)]` on by default
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 25.69s
[INFO] running `Command { std: "docker" "inspect" "979cc0f93205c12722bceab8ce794f3b49802b6f865dd751efd040b3187dc1f3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "979cc0f93205c12722bceab8ce794f3b49802b6f865dd751efd040b3187dc1f3", kill_on_drop: false }`
[INFO] [stdout] 979cc0f93205c12722bceab8ce794f3b49802b6f865dd751efd040b3187dc1f3