[INFO] fetching crate msbwt2 0.3.0... [INFO] testing msbwt2-0.3.0 against beta-2022-04-10 for beta-1.61-1 [INFO] extracting crate msbwt2 0.3.0 into /workspace/builds/worker-119/source [INFO] validating manifest of crates.io crate msbwt2 0.3.0 on toolchain beta-2022-04-10 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate msbwt2 0.3.0 [INFO] finished tweaking crates.io crate msbwt2 0.3.0 [INFO] tweaked toml for crates.io crate msbwt2 0.3.0 written to /workspace/builds/worker-119/source/Cargo.toml [INFO] crate crates.io crate msbwt2 0.3.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] bbbf018aded5cca232367a5a2080a1c16769a6d211f152bfa4b78177ac625c52 [INFO] running `Command { std: "docker" "start" "-a" "bbbf018aded5cca232367a5a2080a1c16769a6d211f152bfa4b78177ac625c52", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "bbbf018aded5cca232367a5a2080a1c16769a6d211f152bfa4b78177ac625c52", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bbbf018aded5cca232367a5a2080a1c16769a6d211f152bfa4b78177ac625c52", kill_on_drop: false }` [INFO] [stdout] bbbf018aded5cca232367a5a2080a1c16769a6d211f152bfa4b78177ac625c52 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 16c96def8730d4e64f941cf384cb5859110ea59d560b6eefa39266d3a0de0c53 [INFO] running `Command { std: "docker" "start" "-a" "16c96def8730d4e64f941cf384cb5859110ea59d560b6eefa39266d3a0de0c53", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling cc v1.0.72 [INFO] [stderr] Compiling libc v0.2.116 [INFO] [stderr] Compiling pkg-config v0.3.24 [INFO] [stderr] Compiling crc32fast v1.3.1 [INFO] [stderr] Compiling serde v1.0.136 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling safemem v0.3.3 [INFO] [stderr] Compiling serde_json v1.0.78 [INFO] [stderr] Compiling bytecount v0.6.2 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling arrayvec v0.7.2 [INFO] [stderr] Compiling exitcode v1.1.2 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling buf_redux v0.8.4 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling libmimalloc-sys v0.1.23 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling flate2 v1.0.22 [INFO] [stderr] Compiling clap v2.34.0 [INFO] [stderr] Compiling xz2 v0.1.6 [INFO] [stderr] Compiling env_logger v0.9.0 [INFO] [stderr] Compiling mimalloc v0.1.27 [INFO] [stderr] Compiling bzip2 v0.4.3 [INFO] [stderr] Compiling needletail v0.4.1 [INFO] [stderr] Compiling msbwt2 v0.3.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 13.25s [INFO] running `Command { std: "docker" "inspect" "16c96def8730d4e64f941cf384cb5859110ea59d560b6eefa39266d3a0de0c53", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "16c96def8730d4e64f941cf384cb5859110ea59d560b6eefa39266d3a0de0c53", kill_on_drop: false }` [INFO] [stdout] 16c96def8730d4e64f941cf384cb5859110ea59d560b6eefa39266d3a0de0c53 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 95d07f1a0c08686da2e8363cfec6f30a35391db115fb9ea6c729478bf7551f55 [INFO] running `Command { std: "docker" "start" "-a" "95d07f1a0c08686da2e8363cfec6f30a35391db115fb9ea6c729478bf7551f55", kill_on_drop: false }` [INFO] [stderr] Compiling crossbeam-utils v0.8.6 [INFO] [stderr] Compiling semver v1.0.4 [INFO] [stderr] Compiling crossbeam-epoch v0.9.6 [INFO] [stderr] Compiling proc-macro2 v1.0.36 [INFO] [stderr] Compiling syn v1.0.86 [INFO] [stderr] Compiling plotters-backend v0.3.2 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling same-file v1.0.6 [INFO] [stderr] Compiling half v1.8.2 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling ppv-lite86 v0.2.16 [INFO] [stderr] Compiling fastrand v1.7.0 [INFO] [stderr] Compiling oorandom v11.1.3 [INFO] [stderr] Compiling remove_dir_all v0.5.3 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling memoffset v0.6.5 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling itertools v0.10.3 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling num_cpus v1.13.1 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling tinytemplate v1.2.1 [INFO] [stderr] Compiling walkdir v2.3.2 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling tempfile v3.3.0 [INFO] [stderr] Compiling plotters-svg v0.3.1 [INFO] [stderr] Compiling serde_cbor v0.11.2 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rustc_version v0.4.0 [INFO] [stderr] Compiling crossbeam-channel v0.5.2 [INFO] [stderr] Compiling quote v1.0.15 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling plotters v0.3.1 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling cast v0.2.7 [INFO] [stderr] Compiling criterion-plot v0.4.4 [INFO] [stderr] Compiling serde_derive v1.0.136 [INFO] [stderr] Compiling criterion v0.3.5 [INFO] [stderr] Compiling msbwt2 v0.3.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 28.48s [INFO] [stderr] Executable unittests src/lib.rs (/opt/rustwide/target/debug/deps/msbwt2-0afab3ec9c492d96) [INFO] [stderr] Executable unittests src/bin/msbwt2-build.rs (/opt/rustwide/target/debug/deps/msbwt2_build-39d0836f0cdb5297) [INFO] [stderr] Executable unittests src/bin/msbwt2-convert.rs (/opt/rustwide/target/debug/deps/msbwt2_convert-f8eb40fa3e9af2d7) [INFO] running `Command { std: "docker" "inspect" "95d07f1a0c08686da2e8363cfec6f30a35391db115fb9ea6c729478bf7551f55", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "95d07f1a0c08686da2e8363cfec6f30a35391db115fb9ea6c729478bf7551f55", kill_on_drop: false }` [INFO] [stdout] 95d07f1a0c08686da2e8363cfec6f30a35391db115fb9ea6c729478bf7551f55 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 85f6fa5ae0983820da9404f74719f433d7453b89df8acd889a1c05172f02fa8f [INFO] running `Command { std: "docker" "start" "-a" "85f6fa5ae0983820da9404f74719f433d7453b89df8acd889a1c05172f02fa8f", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.11s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/msbwt2-0afab3ec9c492d96) [INFO] [stdout] [INFO] [stdout] running 44 tests [INFO] [stdout] test bwt_converter::tests::test_bwt_conversion ... ok [INFO] [stdout] test bwt_converter::tests::test_convert_to_vec ... ok [INFO] [stdout] test dynamic_bwt::tests::test_load_and_add ... ok [INFO] [stdout] test bwt_converter::tests::test_newline ... ok [INFO] [stdout] test bwt_util::tests::test_basic ... ok [INFO] [stdout] test dynamic_bwt::tests::test_init ... ok [INFO] [stdout] test dynamic_bwt::tests::test_constrain_range ... ok [INFO] [stdout] test dynamic_bwt::tests::test_count_kmer ... ok [INFO] [stdout] test bwt_util::tests::test_diff_len ... ok [INFO] [stdout] test dynamic_bwt::tests::test_single_string ... ok [INFO] [stdout] test bwt_converter::tests::test_compression ... ok [INFO] [stdout] test dynamic_bwt::tests::test_multi_length ... ok [INFO] [stdout] test dynamic_bwt::tests::test_multi_string_sorted ... ok [INFO] [stdout] test rle_bplus_tree::tests::test_simple_inserts ... ok [INFO] [stdout] test rle_bplus_tree::tests::test_failure_case_002 ... ok [INFO] [stdout] test rle_bplus_tree::tests::test_failure_case_001 ... ok [INFO] [stdout] test bwt_util::tests::test_cycle_breaker ... ok [INFO] [stdout] test rle_bplus_tree::tests::test_init ... ok [INFO] [stdout] test bwt_converter::tests::test_save_bwt_numpy ... ok [INFO] [stdout] test dynamic_bwt::tests::test_load_dynamicbwt_from_npy ... ok [INFO] [stdout] test run_block_av_flat::tests::test_increment_run ... ok [INFO] [stdout] test run_block_av_flat::tests::test_block_failure_001 ... ok [INFO] [stdout] test dynamic_bwt::tests::test_run_iter ... ok [INFO] [stdout] test rle_bwt::tests::test_constrain_range ... ok [INFO] [stdout] test run_block_av_flat::tests::test_insert ... ok [INFO] [stdout] test rle_bwt::tests::test_count_kmer ... ok [INFO] [stdout] test rle_bwt::tests::test_fmindex ... ok [INFO] [stdout] test run_block_av_flat::tests::test_block_splits ... ok [INFO] [stdout] test run_block_av_flat::tests::test_insert_splitting ... ok [INFO] [stdout] test bwt_converter::tests::test_save_bwt_runs_numpy ... ok [INFO] [stdout] test rle_bwt::tests::test_load_rlebwt_from_npy ... ok [INFO] [stdout] test string_util::tests::test_convert_stoi ... ok [INFO] [stdout] test string_util::tests::test_convert_itos ... ok [INFO] [stdout] test run_block_av_flat::tests::test_init ... ok [INFO] [stdout] test rle_bplus_tree::tests::test_failure_case_003 ... ok [INFO] [stdout] test dynamic_bwt::tests::test_create_from_fastx ... ok [INFO] [stdout] test string_util::tests::test_simple_index ... ok [INFO] [stdout] test run_block_av_flat::tests::test_to_vec ... ok [INFO] [stdout] test string_util::tests::test_reverse_complement_i ... ok [INFO] [stdout] test dynamic_bwt::tests::test_load_dynamicbwt_from_vec ... ok [INFO] [stdout] test dynamic_bwt::tests::test_multi_string_unsorted ... ok [INFO] [stdout] test dynamic_bwt::tests::test_sampled_bwt ... ok [INFO] [stdout] test rle_bplus_tree::tests::test_run_iter ... ok [INFO] [stdout] test rle_bplus_tree::tests::test_10krandom_insert ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 44 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 31.30s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/msbwt2-build.rs (/opt/rustwide/target/debug/deps/msbwt2_build-39d0836f0cdb5297) [INFO] [stderr] Running unittests src/bin/msbwt2-convert.rs (/opt/rustwide/target/debug/deps/msbwt2_convert-f8eb40fa3e9af2d7) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stderr] Doc-tests msbwt2 [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 36 tests [INFO] [stderr] error: test failed, to rerun pass '--doc' [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `rustdoc --edition=2018 --crate-type lib --crate-name msbwt2 --test /opt/rustwide/workdir/src/lib.rs -L dependency=/opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps -L native=/opt/rustwide/target/debug/build/bzip2-sys-0b078352c30d8913/out/lib -L native=/opt/rustwide/target/debug/build/libmimalloc-sys-99d18c66a37b271b/out -L native=/usr/lib/x86_64-linux-gnu --extern arrayvec=/opt/rustwide/target/debug/deps/libarrayvec-1fab3ce7119c2c39.rlib --extern clap=/opt/rustwide/target/debug/deps/libclap-c9a20b5ed5413c4f.rlib --extern criterion=/opt/rustwide/target/debug/deps/libcriterion-5efe84c28058b88d.rlib --extern env_logger=/opt/rustwide/target/debug/deps/libenv_logger-1f533ada6bf724ea.rlib --extern exitcode=/opt/rustwide/target/debug/deps/libexitcode-8dcdc4149a52e152.rlib --extern log=/opt/rustwide/target/debug/deps/liblog-ba3200a69ea295c7.rlib --extern mimalloc=/opt/rustwide/target/debug/deps/libmimalloc-afb3b8b7cc5919ba.rlib --extern msbwt2=/opt/rustwide/target/debug/deps/libmsbwt2-6a664ce1307cdb1b.rlib --extern needletail=/opt/rustwide/target/debug/deps/libneedletail-566051b07fc7daa6.rlib --extern rand=/opt/rustwide/target/debug/deps/librand-e058a9654b6e7b57.rlib --extern rand_core=/opt/rustwide/target/debug/deps/librand_core-f38d854bec04b615.rlib --extern serde_json=/opt/rustwide/target/debug/deps/libserde_json-753a3a42ef1e89d6.rlib --extern tempfile=/opt/rustwide/target/debug/deps/libtempfile-5e01069359621022.rlib -C embed-bitcode=no --error-format human` (signal: 9, SIGKILL: kill) [INFO] running `Command { std: "docker" "inspect" "85f6fa5ae0983820da9404f74719f433d7453b89df8acd889a1c05172f02fa8f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "85f6fa5ae0983820da9404f74719f433d7453b89df8acd889a1c05172f02fa8f", kill_on_drop: false }` [INFO] [stdout] 85f6fa5ae0983820da9404f74719f433d7453b89df8acd889a1c05172f02fa8f