[INFO] fetching crate d4utils 0.2.18... [INFO] testing d4utils-0.2.18 against beta-2022-04-10 for beta-1.61-1 [INFO] extracting crate d4utils 0.2.18 into /workspace/builds/worker-72/source [INFO] validating manifest of crates.io crate d4utils 0.2.18 on toolchain beta-2022-04-10 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate d4utils 0.2.18 [INFO] finished tweaking crates.io crate d4utils 0.2.18 [INFO] tweaked toml for crates.io crate d4utils 0.2.18 written to /workspace/builds/worker-72/source/Cargo.toml [INFO] crate crates.io crate d4utils 0.2.18 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-72/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-72/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 06a1e528f370d574420fd2aaa439c4c9c86eaa8367df11fab71ef4a32116847e [INFO] running `Command { std: "docker" "start" "-a" "06a1e528f370d574420fd2aaa439c4c9c86eaa8367df11fab71ef4a32116847e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "06a1e528f370d574420fd2aaa439c4c9c86eaa8367df11fab71ef4a32116847e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "06a1e528f370d574420fd2aaa439c4c9c86eaa8367df11fab71ef4a32116847e", kill_on_drop: false }` [INFO] [stdout] 06a1e528f370d574420fd2aaa439c4c9c86eaa8367df11fab71ef4a32116847e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-72/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-72/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 215067e36ca3262b6dae10811dd84e31c9a2792eadc73c6384a170cc1ccc16cf [INFO] running `Command { std: "docker" "start" "-a" "215067e36ca3262b6dae10811dd84e31c9a2792eadc73c6384a170cc1ccc16cf", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.94 [INFO] [stderr] Compiling memchr v2.4.0 [INFO] [stderr] Compiling proc-macro2 v1.0.26 [INFO] [stderr] Compiling version_check v0.9.3 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling yaml-rust v0.3.5 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Compiling serde v1.0.125 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling syn v1.0.72 [INFO] [stderr] Compiling ppv-lite86 v0.2.10 [INFO] [stderr] Compiling serde_derive v1.0.125 [INFO] [stderr] Compiling serde_json v1.0.64 [INFO] [stderr] Compiling itoa v0.4.7 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Compiling clang-sys v1.2.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.4 [INFO] [stderr] Compiling memoffset v0.6.3 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling memmap v0.7.0 [INFO] [stderr] Compiling flate2 v1.0.20 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling crossbeam-epoch v0.9.4 [INFO] [stderr] Compiling crossbeam-channel v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling crossbeam-deque v0.8.0 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling plotters v0.2.15 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling d4-framefile v0.2.18 [INFO] [stderr] Compiling d4-hts v0.2.18 [INFO] [stderr] Compiling d4-bigwig v0.2.18 [INFO] [stderr] error: failed to run custom build command for `d4-hts v0.2.18` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-fb9fb8e691537e70/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/d4-hts-5c3f658b4558f0df/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-hts-5c3f658b4558f0df/out/htslib [INFO] [stderr] + git clone -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.2.18/build.rs:33:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55ff3861defd - std::backtrace_rs::backtrace::libunwind::trace::ha359b7f0090e2792 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5 [INFO] [stderr] 1: 0x55ff3861defd - std::backtrace_rs::backtrace::trace_unsynchronized::h0584631f25c1d70e [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55ff3861defd - std::sys_common::backtrace::_print_fmt::hdadffd97d279ff14 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:66:5 [INFO] [stderr] 3: 0x55ff3861defd - ::fmt::h26f189e611080a74 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:45:22 [INFO] [stderr] 4: 0x55ff38642dec - core::fmt::write::hfb5d11dfe037e8b7 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/fmt/mod.rs:1194:17 [INFO] [stderr] 5: 0x55ff3861ab21 - std::io::Write::write_fmt::ha30651f608022a46 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/io/mod.rs:1655:15 [INFO] [stderr] 6: 0x55ff3861fd95 - std::sys_common::backtrace::_print::h7a0e44402913ba60 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:48:5 [INFO] [stderr] 7: 0x55ff3861fd95 - std::sys_common::backtrace::print::h9767dc455a84e728 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:35:9 [INFO] [stderr] 8: 0x55ff3861fd95 - std::panicking::default_hook::{{closure}}::h60afd6c8b12988ad [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:295:22 [INFO] [stderr] 9: 0x55ff3861fa49 - std::panicking::default_hook::ha7b9bac6813f9d21 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:314:9 [INFO] [stderr] 10: 0x55ff386202e2 - std::panicking::rust_panic_with_hook::h7b117a162a6f8664 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:698:17 [INFO] [stderr] 11: 0x55ff38620189 - std::panicking::begin_panic_handler::{{closure}}::h346750923c608600 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:586:13 [INFO] [stderr] 12: 0x55ff3861e3b4 - std::sys_common::backtrace::__rust_end_short_backtrace::h768c56c6a0c055c0 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:138:18 [INFO] [stderr] 13: 0x55ff3861fef9 - rust_begin_unwind [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:584:5 [INFO] [stderr] 14: 0x55ff380d9b43 - core::panicking::panic_fmt::h5c41cb2fa118fdbc [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/panicking.rs:143:14 [INFO] [stderr] 15: 0x55ff380d9a0d - core::panicking::panic::h19a70c01bbabd538 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/panicking.rs:48:5 [INFO] [stderr] 16: 0x55ff380da6f9 - build_script_build::build_own_htslib::hd54aeff7adc72ced [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.2.18/build.rs:33:5 [INFO] [stderr] 17: 0x55ff380dab2e - build_script_build::main::hca3d41dff2dd47b8 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.2.18/build.rs:65:9 [INFO] [stderr] 18: 0x55ff380de5eb - core::ops::function::FnOnce::call_once::he342701937313f98 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 19: 0x55ff380dbe0e - std::sys_common::backtrace::__rust_begin_short_backtrace::hfbba2792e916657d [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:122:18 [INFO] [stderr] 20: 0x55ff380dc901 - std::rt::lang_start::{{closure}}::h56c9c20d0389d9c5 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/rt.rs:145:18 [INFO] [stderr] 21: 0x55ff38616a9e - core::ops::function::impls:: for &F>::call_once::hae31cd38f966dcbc [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 22: 0x55ff38616a9e - std::panicking::try::do_call::h4a4c12a32b804624 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:492:40 [INFO] [stderr] 23: 0x55ff38616a9e - std::panicking::try::h87f80f5db1929b60 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:456:19 [INFO] [stderr] 24: 0x55ff38616a9e - std::panic::catch_unwind::hbc53afd5a2bdc195 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panic.rs:137:14 [INFO] [stderr] 25: 0x55ff38616a9e - std::rt::lang_start_internal::{{closure}}::h2e62ddd08385fac8 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/rt.rs:128:48 [INFO] [stderr] 26: 0x55ff38616a9e - std::panicking::try::do_call::h04b85b79b362213e [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:492:40 [INFO] [stderr] 27: 0x55ff38616a9e - std::panicking::try::h428fba6a4941d8ed [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:456:19 [INFO] [stderr] 28: 0x55ff38616a9e - std::panic::catch_unwind::hd73c90258412492e [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panic.rs:137:14 [INFO] [stderr] 29: 0x55ff38616a9e - std::rt::lang_start_internal::h26255896a96668b5 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/rt.rs:128:20 [INFO] [stderr] 30: 0x55ff380dc8d0 - std::rt::lang_start::h895f9e3038e7e5d6 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/rt.rs:144:17 [INFO] [stderr] 31: 0x55ff380db16c - main [INFO] [stderr] 32: 0x7f5fb30b70b3 - __libc_start_main [INFO] [stderr] 33: 0x55ff380d9e3e - _start [INFO] [stderr] 34: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] running `Command { std: "docker" "inspect" "215067e36ca3262b6dae10811dd84e31c9a2792eadc73c6384a170cc1ccc16cf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "215067e36ca3262b6dae10811dd84e31c9a2792eadc73c6384a170cc1ccc16cf", kill_on_drop: false }` [INFO] [stdout] 215067e36ca3262b6dae10811dd84e31c9a2792eadc73c6384a170cc1ccc16cf