[INFO] fetching crate chemfiles 0.10.2... [INFO] testing chemfiles-0.10.2 against beta-2022-04-10 for beta-1.61-1 [INFO] extracting crate chemfiles 0.10.2 into /workspace/builds/worker-54/source [INFO] validating manifest of crates.io crate chemfiles 0.10.2 on toolchain beta-2022-04-10 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate chemfiles 0.10.2 [INFO] finished tweaking crates.io crate chemfiles 0.10.2 [INFO] tweaked toml for crates.io crate chemfiles 0.10.2 written to /workspace/builds/worker-54/source/Cargo.toml [INFO] crate crates.io crate chemfiles 0.10.2 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-54/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-54/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 66aa87400c807e8fbe01eb99110c0e8b9ebf00cd615cb7dd4bd00a7c4433bad4 [INFO] running `Command { std: "docker" "start" "-a" "66aa87400c807e8fbe01eb99110c0e8b9ebf00cd615cb7dd4bd00a7c4433bad4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "66aa87400c807e8fbe01eb99110c0e8b9ebf00cd615cb7dd4bd00a7c4433bad4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "66aa87400c807e8fbe01eb99110c0e8b9ebf00cd615cb7dd4bd00a7c4433bad4", kill_on_drop: false }` [INFO] [stdout] 66aa87400c807e8fbe01eb99110c0e8b9ebf00cd615cb7dd4bd00a7c4433bad4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-54/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-54/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] fb4beaa433a240f90c8a291674b88c4c72ddb38ca84e51aa26eae0601832d46b [INFO] running `Command { std: "docker" "start" "-a" "fb4beaa433a240f90c8a291674b88c4c72ddb38ca84e51aa26eae0601832d46b", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling cc v1.0.72 [INFO] [stderr] Compiling libc v0.2.107 [INFO] [stderr] Compiling cmake v0.1.46 [INFO] [stderr] Compiling chemfiles-sys v0.10.2 [INFO] [stderr] error: failed to run custom build command for `chemfiles-sys v0.10.2` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/chemfiles-sys-68838e28e9e90922/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] CMAKE_TOOLCHAIN_FILE_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_TOOLCHAIN_FILE_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_TOOLCHAIN_FILE = None [INFO] [stderr] CMAKE_TOOLCHAIN_FILE = None [INFO] [stderr] CMAKE_GENERATOR_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_GENERATOR_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_GENERATOR = None [INFO] [stderr] CMAKE_GENERATOR = None [INFO] [stderr] CMAKE_PREFIX_PATH_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_PREFIX_PATH_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_PREFIX_PATH = None [INFO] [stderr] CMAKE_PREFIX_PATH = None [INFO] [stderr] CMAKE_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE = None [INFO] [stderr] CMAKE = None [INFO] [stderr] running: "cmake" "/opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/." "-DCHEMFILES_VERSION=0.10.2" "-DCHFL_RUST_PREBUILT_TARGET=x86_64-linux-gnu" "-DCHFL_RUST_PREBUILT_SHA256=16cf6f38f817e555d0393db2726ab80b3b6ff1b2d8f884478f938eda9a452371" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/chemfiles-sys-507551ddcf24c630/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Debug" [INFO] [stderr] -- The CXX compiler identification is GNU 9.4.0 [INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++ [INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++ -- works [INFO] [stderr] -- Detecting CXX compiler ABI info [INFO] [stderr] -- Detecting CXX compiler ABI info - done [INFO] [stderr] -- Detecting CXX compile features [INFO] [stderr] -- Detecting CXX compile features - done [INFO] [stderr] -- trying to download https://github.com/chemfiles/chemfiles-prebuilt/releases/download/v0.10.2/chemfiles-static.v0.10.2.x86_64-linux-gnu.tar.gz [INFO] [stderr] -- failed to download prebuilt chemfiles, building from sources [INFO] [stderr] -- The C compiler identification is GNU 9.4.0 [INFO] [stderr] -- Check for working C compiler: /usr/bin/cc [INFO] [stderr] -- Check for working C compiler: /usr/bin/cc -- works [INFO] [stderr] -- Detecting C compiler ABI info [INFO] [stderr] -- Detecting C compiler ABI info - done [INFO] [stderr] -- Detecting C compile features [INFO] [stderr] -- Detecting C compile features - done [INFO] [stderr] -- Unpacking zlib sources [INFO] [stderr] -- Unpacking lzma sources [INFO] [stderr] -- Check if the system is big endian [INFO] [stderr] -- Searching 16 bit integer [INFO] [stderr] -- Using unsigned short [INFO] [stderr] -- Check if the system is big endian - little endian [INFO] [stderr] -- Unpacking bzip2 sources [INFO] [stderr] -- Unpacking fmt sources [INFO] [stderr] -- Unpacking toml11 sources [INFO] [stderr] -- Unpacking netcdf sources [INFO] [stderr] -- Unpacking tng sources [INFO] [stderr] -- Check if the system is big endian [INFO] [stderr] -- Searching 16 bit integer [INFO] [stderr] -- Using unsigned short [INFO] [stderr] -- Check if the system is big endian - little endian [INFO] [stderr] -- Unpacking molfiles sources [INFO] [stderr] -- Unpacking mmtf-cpp sources [INFO] [stderr] -- Unpacking pugixml sources [INFO] [stderr] -- Unpacking xdrfile sources [INFO] [stderr] -- Unpacking gemmi sources [INFO] [stderr] -- Configuring done [INFO] [stderr] -- Generating done [INFO] [stderr] -- Build files have been written to: /opt/rustwide/target/debug/build/chemfiles-sys-507551ddcf24c630/out/build [INFO] [stderr] running: "cmake" "--build" "." "--target" "install" "--config" "Debug" "--parallel" "128" [INFO] [stderr] Scanning dependencies of target bzip2 [INFO] [stderr] Scanning dependencies of target pugixml [INFO] [stderr] Scanning dependencies of target molfiles [INFO] [stderr] Scanning dependencies of target xdrfile [INFO] [stderr] Scanning dependencies of target fmt [INFO] [stderr] Scanning dependencies of target zlib [INFO] [stderr] Scanning dependencies of target tng_io [INFO] [stderr] [ 1%] Building C object chemfiles/external/xdrfile/CMakeFiles/xdrfile.dir/src/xdrfile_trr.c.o [INFO] [stderr] [ 1%] Building C object chemfiles/external/bzip2/CMakeFiles/bzip2.dir/blocksort.c.o [INFO] [stderr] [ 1%] Building CXX object chemfiles/external/CMakeFiles/pugixml.dir/pugixml/src/pugixml.cpp.o [INFO] [stderr] [ 1%] Building C object chemfiles/external/xdrfile/CMakeFiles/xdrfile.dir/src/xdrfile.c.o [INFO] [stderr] [ 2%] Building C object chemfiles/external/xdrfile/CMakeFiles/xdrfile.dir/src/xdrfile_xtc.c.o [INFO] [stderr] [ 2%] Building CXX object chemfiles/external/fmt/CMakeFiles/fmt.dir/src/format.cc.o [INFO] [stderr] [ 3%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/compress.c.o [INFO] [stderr] [ 4%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/deflate.c.o [INFO] [stderr] [ 4%] Building C object chemfiles/external/bzip2/CMakeFiles/bzip2.dir/huffman.c.o [INFO] [stderr] [ 4%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/crc32.c.o [INFO] [stderr] [ 6%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/gzlib.c.o [INFO] [stderr] [ 6%] Building C object chemfiles/external/molfiles/CMakeFiles/molfiles.dir/src/psfplugin.c.o [INFO] [stderr] [ 7%] Building CXX object chemfiles/external/fmt/CMakeFiles/fmt.dir/src/os.cc.o [INFO] [stderr] [ 7%] Building C object chemfiles/external/bzip2/CMakeFiles/bzip2.dir/crctable.c.o [INFO] [stderr] [ 7%] Building C object chemfiles/external/molfiles/CMakeFiles/molfiles.dir/src/moldenplugin.c.o [INFO] [stderr] [ 7%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/gzclose.c.o [INFO] [stderr] [ 7%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/adler32.c.o [INFO] [stderr] [ 7%] Building C object chemfiles/external/molfiles/CMakeFiles/molfiles.dir/src/dcdplugin.c.o [INFO] [stderr] [ 8%] Building C object chemfiles/external/bzip2/CMakeFiles/bzip2.dir/decompress.c.o [INFO] [stderr] [ 8%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/gzwrite.c.o [INFO] [stderr] [ 10%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/inftrees.c.o [INFO] [stderr] [ 10%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/infback.c.o [INFO] [stderr] [ 10%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/inflate.c.o [INFO] [stderr] [ 10%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/gzread.c.o [INFO] [stderr] [ 11%] Building C object chemfiles/external/bzip2/CMakeFiles/bzip2.dir/compress.c.o [INFO] [stderr] [ 10%] Building C object chemfiles/external/bzip2/CMakeFiles/bzip2.dir/bzlib.c.o [INFO] [stderr] [ 11%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/inffast.c.o [INFO] [stderr] [ 12%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/uncompr.c.o [INFO] [stderr] [ 12%] Building C object chemfiles/external/bzip2/CMakeFiles/bzip2.dir/randtable.c.o [INFO] [stderr] [ 12%] Building CXX object chemfiles/external/molfiles/CMakeFiles/molfiles.dir/src/gromacsplugin.cxx.o [INFO] [stderr] [ 13%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/zutil.c.o [INFO] [stderr] [ 14%] Building C object chemfiles/external/zlib/CMakeFiles/zlib.dir/trees.c.o [INFO] [stderr] Scanning dependencies of target netcdf [INFO] [stderr] [ 15%] Building C object chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/bwlzh.c.o [INFO] [stderr] [ 15%] Building C object chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/bwt.c.o [INFO] [stderr] [ 16%] Building C object chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/dict.c.o [INFO] [stderr] [ 16%] Building C object chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/coder.c.o [INFO] [stderr] [ 17%] Building C object chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/fixpoint.c.o [INFO] [stderr] [ 17%] Building C object chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/huffman.c.o [INFO] [stderr] [ 20%] Building C object chemfiles/external/tng/CMakeFiles/tng_io.dir/src/lib/tng_io.c.o [INFO] [stderr] [ 20%] Building C object chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/mtf.c.o [INFO] [stderr] [ 20%] Building C object chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/lz77.c.o [INFO] [stderr] [ 23%] Building C object chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/vals16.c.o [INFO] [stderr] [ 20%] Building C object chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/merge_sort.c.o [INFO] [stderr] [ 20%] Building C 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Run "cmake [INFO] [stderr] --help-policy CMP0077" for policy details. Use the cmake_policy command to [INFO] [stderr] set the policy and suppress this warning. [INFO] [stderr] [INFO] [stderr] For compatibility with older versions of CMake, option is clearing the [INFO] [stderr] normal variable 'BUILD_SHARED_LIBS'. [INFO] [stderr] This warning is for project developers. Use -Wno-dev to suppress it. [INFO] [stderr] [INFO] [stderr] CMake Warning: [INFO] [stderr] Manually-specified variables were not used by the project: [INFO] [stderr] [INFO] [stderr] CMAKE_ASM_COMPILER [INFO] [stderr] CMAKE_ASM_FLAGS [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] make: warning: -j128 forced in submake: resetting jobserver mode. [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:765: chemfiles/CMakeFiles/chemfiles_objects.dir/src/pdb_connectivity.cpp.o] Error 1 [INFO] [stderr] make[2]: *** Waiting for unfinished jobs.... [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:89: chemfiles/CMakeFiles/chemfiles_objects.dir/src/Connectivity.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:115: chemfiles/CMakeFiles/chemfiles_objects.dir/src/Format.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:323: chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/selection.cpp.o] Error 1 [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:375: chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/Bz2File.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:232: chemfiles/CMakeFiles/chemfiles_objects.dir/src/UnitCell.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:739: chemfiles/CMakeFiles/chemfiles_objects.dir/src/guess_format.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:336: chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/shared_allocator.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:193: chemfiles/CMakeFiles/chemfiles_objects.dir/src/Selection.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:440: chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/PlainFile.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:427: chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/NcFile.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:102: chemfiles/CMakeFiles/chemfiles_objects.dir/src/File.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:63: chemfiles/CMakeFiles/chemfiles_objects.dir/src/Atom.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:180: chemfiles/CMakeFiles/chemfiles_objects.dir/src/Residue.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:752: chemfiles/CMakeFiles/chemfiles_objects.dir/src/parse.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:219: chemfiles/CMakeFiles/chemfiles_objects.dir/src/Trajectory.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:310: chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/residue.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:817: chemfiles/CMakeFiles/chemfiles_objects.dir/src/selections/lexer.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:726: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/mmCIF.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:687: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/Tinker.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:388: chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/GzFile.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:713: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/XYZ.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:414: chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/MemoryFile.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:596: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/MOL2.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:557: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/LAMMPSData.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:154: chemfiles/CMakeFiles/chemfiles_objects.dir/src/Frame.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:297: chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/property.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:349: chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/topology.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:830: chemfiles/CMakeFiles/chemfiles_objects.dir/src/selections/parser.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:453: chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/TNGFile.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:622: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/PDB.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:76: chemfiles/CMakeFiles/chemfiles_objects.dir/src/Configuration.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/selections/NumericValues.cpp: In member function 'size_t chemfiles::NumericValues::capacity() const': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/selections/NumericValues.cpp:75:44: warning: useless cast to type 'size_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 75 | return static_cast(capacity); [INFO] [stderr] | ^ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/selections/NumericValues.cpp: In member function 'size_t chemfiles::NumericValues::size() const': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/selections/NumericValues.cpp:90:40: warning: useless cast to type 'size_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 90 | return static_cast(size); [INFO] [stderr] | ^ [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:206: chemfiles/CMakeFiles/chemfiles_objects.dir/src/Topology.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] In file included from /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/capi/cell.cpp:9: [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp: In function 'size_t chemfiles::checked_cast(uint64_t)': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:27:47: warning: useless cast to type 'uint64_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 27 | if (value > static_cast(SIZE_MAX)) { [INFO] [stderr] | ^ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:30:37: warning: useless cast to type 'size_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 30 | return static_cast(value); [INFO] [stderr] | ^ [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:466: chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/XDRFile.cpp.o] Error 1 [INFO] [stderr] In file included from /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/capi/trajectory.cpp:10: [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp: In function 'size_t chemfiles::checked_cast(uint64_t)': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:27:47: warning: useless cast to type 'uint64_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 27 | if (value > static_cast(SIZE_MAX)) { [INFO] [stderr] | ^ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:30:37: warning: useless cast to type 'size_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 30 | return static_cast(value); [INFO] [stderr] | ^ [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:492: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/AmberNetCDF.cpp.o] Error 1 [INFO] [stderr] In file included from /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/capi/atom.cpp:10: [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp: In function 'size_t chemfiles::checked_cast(uint64_t)': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:27:47: warning: useless cast to type 'uint64_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 27 | if (value > static_cast(SIZE_MAX)) { [INFO] [stderr] | ^ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:30:37: warning: useless cast to type 'size_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 30 | return static_cast(value); [INFO] [stderr] | ^ [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:674: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/TRR.cpp.o] Error 1 [INFO] [stderr] In file included from /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/capi/frame.cpp:9: [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp: In function 'size_t chemfiles::checked_cast(uint64_t)': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:27:47: warning: useless cast to type 'uint64_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 27 | if (value > static_cast(SIZE_MAX)) { [INFO] [stderr] | ^ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:30:37: warning: useless cast to type 'size_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 30 | return static_cast(value); [INFO] [stderr] | ^ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/files/XzFile.cpp: In member function 'virtual void chemfiles::XzFile::seek(uint64_t)': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/files/XzFile.cpp:142:65: warning: useless cast to type 'size_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 142 | auto count = this->read(buffer, static_cast(position)); [INFO] [stderr] | ^ [INFO] [stderr] In file included from /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/capi/misc.cpp:14: [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp: In function 'size_t chemfiles::checked_cast(uint64_t)': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:27:47: warning: useless cast to type 'uint64_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 27 | if (value > static_cast(SIZE_MAX)) { [INFO] [stderr] | ^ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:30:37: warning: useless cast to type 'size_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 30 | return static_cast(value); [INFO] [stderr] | ^ [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:856: chemfiles/CMakeFiles/chemfiles_objects.dir/src/warnings.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:570: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/LAMMPSTrajectory.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:635: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/SDF.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:362: chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/trajectory.cpp.o] Error 1 [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/capi/misc.cpp: In function 'chfl_status chfl_formats_list(chfl_format_metadata**, uint64_t*)': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/capi/misc.cpp:70:54: warning: useless cast to type 'uint64_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 70 | *count = static_cast(formats.size()); [INFO] [stderr] | ^ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:74:9: note: in definition of macro 'CHFL_ERROR_CATCH' [INFO] [stderr] 74 | _instructions_ \ [INFO] [stderr] | ^~~~~~~~~~~~~~ [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:258: chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/cell.cpp.o] Error 1 [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/formats/XTC.cpp: In member function 'virtual size_t chemfiles::XTCFormat::nsteps()': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/formats/XTC.cpp:63:72: warning: useless cast to type 'size_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 63 | size_t XTCFormat::nsteps() { return static_cast(file_.nframes()); } [INFO] [stderr] | ^ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/capi/atom.cpp: In function 'chfl_status chfl_atom_properties_count(const CHFL_ATOM*, uint64_t*)': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/capi/atom.cpp:191:65: warning: useless cast to type 'uint64_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 191 | *count = static_cast(atom->properties().size()); [INFO] [stderr] | ^ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:74:9: note: in definition of macro 'CHFL_ERROR_CATCH' [INFO] [stderr] 74 | _instructions_ \ [INFO] [stderr] | ^~~~~~~~~~~~~~ [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:245: chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/atom.cpp.o] Error 1 [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/formats/Molfile.cpp: In function 'void hash_combine(std::size_t&)': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/formats/Molfile.cpp:78:39: warning: unused parameter 'seed' [-Wunused-parameter] [INFO] [stderr] 78 | inline void hash_combine(std::size_t& seed) { } [INFO] [stderr] | ~~~~~~~~~~~~~^~~~ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/capi/frame.cpp: In function 'chfl_status chfl_frame_atoms_count(const CHFL_FRAME*, uint64_t*)': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/capi/frame.cpp:51:53: warning: useless cast to type 'uint64_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 51 | *count = static_cast(frame->size()); [INFO] [stderr] | ^ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:74:9: note: in definition of macro 'CHFL_ERROR_CATCH' [INFO] [stderr] 74 | _instructions_ \ [INFO] [stderr] | ^~~~~~~~~~~~~~ [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/capi/frame.cpp: In function 'chfl_status chfl_frame_properties_count(const CHFL_FRAME*, uint64_t*)': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/src/capi/frame.cpp:214:66: warning: useless cast to type 'uint64_t' {aka 'long unsigned int'} [-Wuseless-cast] [INFO] [stderr] 214 | *count = static_cast(frame->properties().size()); [INFO] [stderr] | ^ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/chemfiles/include/chemfiles/capi/utils.hpp:74:9: note: in definition of macro 'CHFL_ERROR_CATCH' [INFO] [stderr] 74 | _instructions_ \ [INFO] [stderr] | ^~~~~~~~~~~~~~ [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:167: chemfiles/CMakeFiles/chemfiles_objects.dir/src/Property.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:518: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/CML.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:141: chemfiles/CMakeFiles/chemfiles_objects.dir/src/FormatMetadata.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:609: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/Molfile.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:661: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/TNG.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:700: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/XTC.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:271: chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/frame.cpp.o] Error 1 [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] make[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:505: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/CIF.cpp.o] Error 1 [INFO] [stderr] make[1]: *** [CMakeFiles/Makefile2:332: chemfiles/CMakeFiles/chemfiles_objects.dir/all] Error 2 [INFO] [stderr] make: *** [Makefile:130: all] Error 2 [INFO] [stderr] thread 'main' panicked at ' [INFO] [stderr] command did not execute successfully, got: exit status: 2 [INFO] [stderr] [INFO] [stderr] build script failed, must exit now', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.46/src/lib.rs:974:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x561fef21d1ed - std::backtrace_rs::backtrace::libunwind::trace::ha359b7f0090e2792 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5 [INFO] [stderr] 1: 0x561fef21d1ed - std::backtrace_rs::backtrace::trace_unsynchronized::h0584631f25c1d70e [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x561fef21d1ed - std::sys_common::backtrace::_print_fmt::hdadffd97d279ff14 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:66:5 [INFO] [stderr] 3: 0x561fef21d1ed - ::fmt::h26f189e611080a74 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:45:22 [INFO] [stderr] 4: 0x561fef23cf5c - core::fmt::write::hfb5d11dfe037e8b7 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/fmt/mod.rs:1194:17 [INFO] [stderr] 5: 0x561fef219d01 - std::io::Write::write_fmt::ha30651f608022a46 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/io/mod.rs:1655:15 [INFO] [stderr] 6: 0x561fef21ed95 - std::sys_common::backtrace::_print::h7a0e44402913ba60 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:48:5 [INFO] [stderr] 7: 0x561fef21ed95 - std::sys_common::backtrace::print::h9767dc455a84e728 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:35:9 [INFO] [stderr] 8: 0x561fef21ed95 - std::panicking::default_hook::{{closure}}::h60afd6c8b12988ad [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:295:22 [INFO] [stderr] 9: 0x561fef21ea49 - std::panicking::default_hook::ha7b9bac6813f9d21 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:314:9 [INFO] [stderr] 10: 0x561fef21f2e2 - std::panicking::rust_panic_with_hook::h7b117a162a6f8664 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:698:17 [INFO] [stderr] 11: 0x561fef21f1c7 - std::panicking::begin_panic_handler::{{closure}}::h346750923c608600 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:588:13 [INFO] [stderr] 12: 0x561fef21d6a4 - std::sys_common::backtrace::__rust_end_short_backtrace::h768c56c6a0c055c0 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:138:18 [INFO] [stderr] 13: 0x561fef21eef9 - rust_begin_unwind [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:584:5 [INFO] [stderr] 14: 0x561fef18d4d3 - core::panicking::panic_fmt::h5c41cb2fa118fdbc [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/panicking.rs:143:14 [INFO] [stderr] 15: 0x561fef1988ad - cmake::fail::hb9168b43bf08d5a2 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.46/src/lib.rs:974:5 [INFO] [stderr] 16: 0x561fef1982e5 - cmake::run::h61c695c8f7261223 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.46/src/lib.rs:952:9 [INFO] [stderr] 17: 0x561fef195500 - cmake::Config::build::hf45a6faf2d76ed55 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.46/src/lib.rs:832:9 [INFO] [stderr] 18: 0x561fef18e1d8 - build_script_build::build_chemfiles::h88d68a16bbd796ea [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/build.rs:33:19 [INFO] [stderr] 19: 0x561fef18de1e - build_script_build::main::h42934ca8888b2377 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/chemfiles-sys-0.10.2/build.rs:10:19 [INFO] [stderr] 20: 0x561fef19060b - core::ops::function::FnOnce::call_once::h3816b22b86ab0c9e [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 21: 0x561fef18ed7e - std::sys_common::backtrace::__rust_begin_short_backtrace::h83ec3d7bf43eee63 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:122:18 [INFO] [stderr] 22: 0x561fef18ebb1 - std::rt::lang_start::{{closure}}::hde66f83f29751d32 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/rt.rs:145:18 [INFO] [stderr] 23: 0x561fef21572e - core::ops::function::impls:: for &F>::call_once::hae31cd38f966dcbc [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 24: 0x561fef21572e - std::panicking::try::do_call::h4a4c12a32b804624 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:492:40 [INFO] [stderr] 25: 0x561fef21572e - std::panicking::try::h87f80f5db1929b60 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:456:19 [INFO] [stderr] 26: 0x561fef21572e - std::panic::catch_unwind::hbc53afd5a2bdc195 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panic.rs:137:14 [INFO] [stderr] 27: 0x561fef21572e - std::rt::lang_start_internal::{{closure}}::h2e62ddd08385fac8 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/rt.rs:128:48 [INFO] [stderr] 28: 0x561fef21572e - std::panicking::try::do_call::h04b85b79b362213e [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:492:40 [INFO] [stderr] 29: 0x561fef21572e - std::panicking::try::h428fba6a4941d8ed [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:456:19 [INFO] [stderr] 30: 0x561fef21572e - std::panic::catch_unwind::hd73c90258412492e [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panic.rs:137:14 [INFO] [stderr] 31: 0x561fef21572e - std::rt::lang_start_internal::h26255896a96668b5 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/rt.rs:128:20 [INFO] [stderr] 32: 0x561fef18eb80 - std::rt::lang_start::ha5f3eb9e2274fef9 [INFO] [stderr] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/rt.rs:144:17 [INFO] [stderr] 33: 0x561fef18e9dc - main [INFO] [stderr] 34: 0x7f1d8d87f0b3 - __libc_start_main [INFO] [stderr] 35: 0x561fef18d71e - _start [INFO] [stderr] 36: 0x0 - [INFO] running `Command { std: "docker" "inspect" "fb4beaa433a240f90c8a291674b88c4c72ddb38ca84e51aa26eae0601832d46b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fb4beaa433a240f90c8a291674b88c4c72ddb38ca84e51aa26eae0601832d46b", kill_on_drop: false }` [INFO] [stdout] fb4beaa433a240f90c8a291674b88c4c72ddb38ca84e51aa26eae0601832d46b