[INFO] cloning repository https://github.com/oicr-gsi/barcodex-rs [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/oicr-gsi/barcodex-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Foicr-gsi%2Fbarcodex-rs", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Foicr-gsi%2Fbarcodex-rs'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 192d1d201dd44715945965621224021ec55e1c43 [INFO] testing oicr-gsi/barcodex-rs against beta-2022-04-10 for beta-1.61-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Foicr-gsi%2Fbarcodex-rs" "/workspace/builds/worker-58/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-58/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/oicr-gsi/barcodex-rs on toolchain beta-2022-04-10 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/oicr-gsi/barcodex-rs [INFO] finished tweaking git repo https://github.com/oicr-gsi/barcodex-rs [INFO] tweaked toml for git repo https://github.com/oicr-gsi/barcodex-rs written to /workspace/builds/worker-58/source/Cargo.toml [INFO] crate git repo https://github.com/oicr-gsi/barcodex-rs already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 58002a410d0364bbe01eebabdc9f118655d03ae8b3c3c884e76ccfd65da87d46 [INFO] running `Command { std: "docker" "start" "-a" "58002a410d0364bbe01eebabdc9f118655d03ae8b3c3c884e76ccfd65da87d46", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "58002a410d0364bbe01eebabdc9f118655d03ae8b3c3c884e76ccfd65da87d46", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "58002a410d0364bbe01eebabdc9f118655d03ae8b3c3c884e76ccfd65da87d46", kill_on_drop: false }` [INFO] [stdout] 58002a410d0364bbe01eebabdc9f118655d03ae8b3c3c884e76ccfd65da87d46 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 98a20f8d2223a32c8a5a0c092a069f9b16446507dc32ae5b3c37136680306c43 [INFO] running `Command { std: "docker" "start" "-a" "98a20f8d2223a32c8a5a0c092a069f9b16446507dc32ae5b3c37136680306c43", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling proc-macro2 v1.0.19 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling syn v1.0.36 [INFO] [stderr] Compiling autocfg v1.0.0 [INFO] [stderr] Compiling serde_derive v1.0.114 [INFO] [stderr] Compiling serde v1.0.114 [INFO] [stderr] Compiling libc v0.2.73 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling getrandom v0.1.14 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling unicode-segmentation v1.6.0 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling ppv-lite86 v0.2.8 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling itoa v0.4.6 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling bit-vec v0.6.2 [INFO] [stderr] Compiling adler v0.2.3 [INFO] [stderr] Compiling fixedbitset v0.1.9 [INFO] [stderr] Compiling ordermap v0.3.5 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling bio v0.31.0 [INFO] [stderr] Compiling serde_json v1.0.57 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling either v1.5.3 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling termcolor v1.1.0 [INFO] [stderr] Compiling strsim v0.10.0 [INFO] [stderr] Compiling bytecount v0.6.0 [INFO] [stderr] Compiling fnv v1.0.7 [INFO] [stderr] Compiling os_str_bytes v2.3.1 [INFO] [stderr] Compiling strum v0.18.0 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling itertools v0.9.0 [INFO] [stderr] Compiling miniz_oxide v0.4.0 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling petgraph v0.4.13 [INFO] [stderr] Compiling bit-set v0.5.2 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling proc-macro-error-attr v0.4.12 [INFO] [stderr] Compiling proc-macro-error v0.4.12 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling hashbrown v0.8.1 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling indexmap v1.5.0 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling flate2 v1.0.16 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling ordered-float v1.1.0 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling statrs v0.12.0 [INFO] [stderr] Compiling syn-mid v0.5.0 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling snafu-derive v0.6.8 [INFO] [stderr] Compiling strum_macros v0.18.0 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling clap_derive v3.0.0-beta.1 [INFO] [stderr] Compiling snafu v0.6.8 [INFO] [stderr] Compiling bstr v0.2.13 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling multimap v0.6.0 [INFO] [stderr] Compiling bio-types v0.7.0 [INFO] [stderr] Compiling clap v3.0.0-beta.1 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling barcodex-rs v0.1.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 13s [INFO] running `Command { std: "docker" "inspect" "98a20f8d2223a32c8a5a0c092a069f9b16446507dc32ae5b3c37136680306c43", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "98a20f8d2223a32c8a5a0c092a069f9b16446507dc32ae5b3c37136680306c43", kill_on_drop: false }` [INFO] [stdout] 98a20f8d2223a32c8a5a0c092a069f9b16446507dc32ae5b3c37136680306c43 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] dcba1f816747b6c232ae7408bfc76c5fef6964f661f01bebef417e9a9c7ff544 [INFO] running `Command { std: "docker" "start" "-a" "dcba1f816747b6c232ae7408bfc76c5fef6964f661f01bebef417e9a9c7ff544", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling barcodex-rs v0.1.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 8.02s [INFO] [stderr] Executable unittests src/main.rs (/opt/rustwide/target/debug/deps/barcodex_rs-00217c44ab273df4) [INFO] running `Command { std: "docker" "inspect" "dcba1f816747b6c232ae7408bfc76c5fef6964f661f01bebef417e9a9c7ff544", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "dcba1f816747b6c232ae7408bfc76c5fef6964f661f01bebef417e9a9c7ff544", kill_on_drop: false }` [INFO] [stdout] dcba1f816747b6c232ae7408bfc76c5fef6964f661f01bebef417e9a9c7ff544 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 2faaf3e3b4df627690d1a1cd4204dcb64acd2e93c6289e6993a4adf8de74818b [INFO] running `Command { std: "docker" "start" "-a" "2faaf3e3b4df627690d1a1cd4204dcb64acd2e93c6289e6993a4adf8de74818b", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 2.81s [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/barcodex_rs-00217c44ab273df4) [INFO] [stdout] [INFO] [stdout] running 6 tests [INFO] [stdout] test tests::test_i0 ... ok [INFO] [stdout] test tests::test_s0 ... ok [INFO] [stdout] test tests::test_i2 ... ok [INFO] [stdout] test tests::test_i1 ... ok [INFO] [stdout] test tests::test_s1 ... ok [INFO] [stdout] test tests::test_s2 ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "2faaf3e3b4df627690d1a1cd4204dcb64acd2e93c6289e6993a4adf8de74818b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2faaf3e3b4df627690d1a1cd4204dcb64acd2e93c6289e6993a4adf8de74818b", kill_on_drop: false }` [INFO] [stdout] 2faaf3e3b4df627690d1a1cd4204dcb64acd2e93c6289e6993a4adf8de74818b