[INFO] cloning repository https://github.com/mbhall88/drprg [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/mbhall88/drprg" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmbhall88%2Fdrprg", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmbhall88%2Fdrprg'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 26778cd8f12fbbc5194d20dba412f6dfcb1e1333 [INFO] testing mbhall88/drprg against beta-2022-04-10 for beta-1.61-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmbhall88%2Fdrprg" "/workspace/builds/worker-7/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-7/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/mbhall88/drprg on toolchain beta-2022-04-10 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/mbhall88/drprg [INFO] finished tweaking git repo https://github.com/mbhall88/drprg [INFO] tweaked toml for git repo https://github.com/mbhall88/drprg written to /workspace/builds/worker-7/source/Cargo.toml [INFO] crate git repo https://github.com/mbhall88/drprg already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] b5dc943861ce88135374f721c26133bf8a7e5f9d7a701b2dd70d4023544bda32 [INFO] running `Command { std: "docker" "start" "-a" "b5dc943861ce88135374f721c26133bf8a7e5f9d7a701b2dd70d4023544bda32", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "b5dc943861ce88135374f721c26133bf8a7e5f9d7a701b2dd70d4023544bda32", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b5dc943861ce88135374f721c26133bf8a7e5f9d7a701b2dd70d4023544bda32", kill_on_drop: false }` [INFO] [stdout] b5dc943861ce88135374f721c26133bf8a7e5f9d7a701b2dd70d4023544bda32 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3af37743c86139d1ced8d23c5dcfe6d9203b2a6e4a36f0f01e30759064bc4a86 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "3af37743c86139d1ced8d23c5dcfe6d9203b2a6e4a36f0f01e30759064bc4a86", kill_on_drop: false }` [INFO] [stderr] Compiling syn v1.0.69 [INFO] [stderr] Compiling serde v1.0.125 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling ndarray v0.14.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling bio v0.33.0 [INFO] [stderr] Compiling triple_accel v0.3.4 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling strum v0.20.0 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling fs_extra v1.2.0 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-rational v0.2.4 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling matrixmultiply v0.2.4 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling jobserver v0.1.22 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling generic-array v0.13.3 [INFO] [stderr] Compiling petgraph v0.5.1 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling num-complex v0.3.1 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling ordered-float v1.1.1 [INFO] [stderr] Compiling float-cmp v0.8.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling cc v1.0.67 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling env_logger v0.8.3 [INFO] [stderr] Compiling derefable v0.1.0 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Compiling tempfile v3.2.0 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling openssl-src v111.15.0+1.1.1k [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling alga v0.9.3 [INFO] [stderr] Compiling openssl-sys v0.9.61 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling curl-sys v0.4.42+curl-7.76.0 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling bzip2-sys v0.1.10+1.0.8 [INFO] [stderr] Compiling hts-sys v1.11.1-fix1 [INFO] [stderr] Compiling rand_distr v0.2.2 [INFO] [stderr] Compiling nalgebra v0.19.0 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling serde_derive v1.0.125 [INFO] [stderr] Compiling thiserror-impl v1.0.24 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Compiling enum-map-derive v0.4.6 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling structopt-derive v0.4.14 [INFO] [stderr] Compiling enum-map v0.6.4 [INFO] [stderr] Compiling thiserror v1.0.24 [INFO] [stderr] Compiling bio-types v0.11.0 [INFO] [stderr] Compiling statrs v0.13.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling bstr v0.2.15 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling multimap v0.8.3 [INFO] [stderr] Compiling serde_json v1.0.64 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling rust-htslib v0.36.0 [INFO] [stderr] Compiling structopt v0.3.21 [INFO] [stderr] Compiling drprg v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: an associated function with this name may be added to the standard library in the future [INFO] [stdout] --> src/predict.rs:302:32 [INFO] [stdout] | [INFO] [stdout] 302 | None => self.input.file_prefix().unwrap(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unstable_name_collisions)]` on by default [INFO] [stdout] = warning: once this associated item is added to the standard library, the ambiguity may cause an error or change in behavior! [INFO] [stdout] = note: for more information, see issue #48919 [INFO] [stdout] = help: call with fully qualified syntax `file_prefix(...)` to keep using the current method [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 4m 31s [INFO] running `Command { std: "docker" "inspect" "3af37743c86139d1ced8d23c5dcfe6d9203b2a6e4a36f0f01e30759064bc4a86", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3af37743c86139d1ced8d23c5dcfe6d9203b2a6e4a36f0f01e30759064bc4a86", kill_on_drop: false }` [INFO] [stdout] 3af37743c86139d1ced8d23c5dcfe6d9203b2a6e4a36f0f01e30759064bc4a86 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] c30a6897b5b33f9166e16b25a6e476c4e917b0349a376406c6229ee027a35edb [INFO] running `Command { std: "docker" "start" "-a" "c30a6897b5b33f9166e16b25a6e476c4e917b0349a376406c6229ee027a35edb", kill_on_drop: false }` [INFO] [stderr] Compiling predicates-core v1.0.2 [INFO] [stderr] Compiling wait-timeout v0.2.0 [INFO] [stdout] warning: an associated function with this name may be added to the standard library in the future [INFO] [stdout] --> src/predict.rs:302:32 [INFO] [stdout] | [INFO] [stdout] 302 | None => self.input.file_prefix().unwrap(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unstable_name_collisions)]` on by default [INFO] [stdout] = warning: once this associated item is added to the standard library, the ambiguity may cause an error or change in behavior! [INFO] [stdout] = note: for more information, see issue #48919 [INFO] [stdout] = help: call with fully qualified syntax `file_prefix(...)` to keep using the current method [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling predicates v1.0.8 [INFO] [stderr] Compiling predicates-tree v1.0.2 [INFO] [stderr] Compiling assert_cmd v1.0.3 [INFO] [stderr] Compiling drprg v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: an associated function with this name may be added to the standard library in the future [INFO] [stdout] --> src/lib.rs:890:27 [INFO] [stdout] | [INFO] [stdout] 890 | let actual = path.file_prefix().unwrap(); [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unstable_name_collisions)]` on by default [INFO] [stdout] = warning: once this associated item is added to the standard library, the ambiguity may cause an error or change in behavior! [INFO] [stdout] = note: for more information, see issue #48919 [INFO] [stdout] = help: call with fully qualified syntax `PathExt::file_prefix(...)` to keep using the current method [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: an associated function with this name may be added to the standard library in the future [INFO] [stdout] --> src/lib.rs:900:27 [INFO] [stdout] | [INFO] [stdout] 900 | let actual = path.file_prefix().unwrap(); [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = warning: once this associated item is added to the standard library, the ambiguity may cause an error or change in behavior! [INFO] [stdout] = note: for more information, see issue #48919 [INFO] [stdout] = help: call with fully qualified syntax `PathExt::file_prefix(...)` to keep using the current method [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: an associated function with this name may be added to the standard library in the future [INFO] [stdout] --> src/lib.rs:910:27 [INFO] [stdout] | [INFO] [stdout] 910 | let actual = path.file_prefix().unwrap(); [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = warning: once this associated item is added to the standard library, the ambiguity may cause an error or change in behavior! [INFO] [stdout] = note: for more information, see issue #48919 [INFO] [stdout] = help: call with fully qualified syntax `PathExt::file_prefix(...)` to keep using the current method [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: an associated function with this name may be added to the standard library in the future [INFO] [stdout] --> src/predict.rs:302:32 [INFO] [stdout] | [INFO] [stdout] 302 | None => self.input.file_prefix().unwrap(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unstable_name_collisions)]` on by default [INFO] [stdout] = warning: once this associated item is added to the standard library, the ambiguity may cause an error or change in behavior! [INFO] [stdout] = note: for more information, see issue #48919 [INFO] [stdout] = help: call with fully qualified syntax `file_prefix(...)` to keep using the current method [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 20.07s [INFO] [stderr] Executable unittests src/lib.rs (/opt/rustwide/target/debug/deps/drprg-54b686feb1620311) [INFO] [stderr] Executable unittests src/main.rs (/opt/rustwide/target/debug/deps/drprg-3bda3eed9cf73270) [INFO] [stderr] Executable tests/main.rs (/opt/rustwide/target/debug/deps/main-1ee6eb8afa8edc0d) [INFO] running `Command { std: "docker" "inspect" "c30a6897b5b33f9166e16b25a6e476c4e917b0349a376406c6229ee027a35edb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c30a6897b5b33f9166e16b25a6e476c4e917b0349a376406c6229ee027a35edb", kill_on_drop: false }` [INFO] [stdout] c30a6897b5b33f9166e16b25a6e476c4e917b0349a376406c6229ee027a35edb [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] dd5e09f86003c583c2b2a452e3c8baac7f37270709bc55cc6d8ca0fd2a26e21a [INFO] running `Command { std: "docker" "start" "-a" "dd5e09f86003c583c2b2a452e3c8baac7f37270709bc55cc6d8ca0fd2a26e21a", kill_on_drop: false }` [INFO] [stderr] warning: an associated function with this name may be added to the standard library in the future [INFO] [stderr] --> src/lib.rs:890:27 [INFO] [stderr] | [INFO] [stderr] 890 | let actual = path.file_prefix().unwrap(); [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unstable_name_collisions)]` on by default [INFO] [stderr] = warning: once this associated item is added to the standard library, the ambiguity may cause an error or change in behavior! [INFO] [stderr] = note: for more information, see issue #48919 [INFO] [stderr] = help: call with fully qualified syntax `PathExt::file_prefix(...)` to keep using the current method [INFO] [stderr] [INFO] [stderr] warning: an associated function with this name may be added to the standard library in the future [INFO] [stderr] --> src/lib.rs:900:27 [INFO] [stderr] | [INFO] [stderr] 900 | let actual = path.file_prefix().unwrap(); [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = warning: once this associated item is added to the standard library, the ambiguity may cause an error or change in behavior! [INFO] [stderr] = note: for more information, see issue #48919 [INFO] [stderr] = help: call with fully qualified syntax `PathExt::file_prefix(...)` to keep using the current method [INFO] [stderr] [INFO] [stderr] warning: an associated function with this name may be added to the standard library in the future [INFO] [stderr] --> src/lib.rs:910:27 [INFO] [stderr] | [INFO] [stderr] 910 | let actual = path.file_prefix().unwrap(); [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = warning: once this associated item is added to the standard library, the ambiguity may cause an error or change in behavior! [INFO] [stderr] = note: for more information, see issue #48919 [INFO] [stderr] = help: call with fully qualified syntax `PathExt::file_prefix(...)` to keep using the current method [INFO] [stderr] [INFO] [stderr] warning: `drprg` (lib test) generated 3 warnings [INFO] [stderr] warning: an associated function with this name may be added to the standard library in the future [INFO] [stderr] --> src/predict.rs:302:32 [INFO] [stderr] | [INFO] [stderr] 302 | None => self.input.file_prefix().unwrap(), [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unstable_name_collisions)]` on by default [INFO] [stderr] = warning: once this associated item is added to the standard library, the ambiguity may cause an error or change in behavior! [INFO] [stderr] = note: for more information, see issue #48919 [INFO] [stderr] = help: call with fully qualified syntax `file_prefix(...)` to keep using the current method [INFO] [stderr] [INFO] [stderr] warning: `drprg` (bin "drprg") generated 1 warning [INFO] [stderr] warning: `drprg` (bin "drprg" test) generated 1 warning (1 duplicate) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.25s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/drprg-54b686feb1620311) [INFO] [stdout] [INFO] [stdout] running 117 tests [INFO] [stdout] test filter::test::filter_bcf_record_is_high_covg_null_gt_sum_is_above ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_long_indel_del_above ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_high_covg_same_as_max ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_long_indel_del_below_same_as_max ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_high_covg_above_max ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_long_indel_del_below ... ok [INFO] [stdout] test filter::test::filter_bcf_record_has_strand_bias_above ... ok [INFO] [stdout] test filter::test::filter_bcf_record_has_strand_bias_below ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_high_covg_no_covg_but_max_covg_unset ... ok [INFO] [stdout] test filter::test::filter_bcf_record_has_strand_bias_null_uses_all ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_long_indel_ins_above ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_long_indel_ins_below ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_long_indel_ref ... ok [INFO] [stdout] test filter::test::filter_all_pass ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_covg_below_min ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_high_covg ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_long_indel_null ... ok [INFO] [stdout] test filter::test::filter_bcf_record_has_strand_bias_no_coverage ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_long_indel_ins_same_as_max ... ok [INFO] [stdout] test filter::test::filter_bcf_record_has_strand_bias_same_as_min ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_high_covg_null_gt_sum_of_all_is_above ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_covg_no_covg ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_gt_conf_above ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_high_covg_no_covg ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_covg_same_as_min ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_gt_conf_below ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_covg_no_covg_but_min_covg_unset ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_covg_null_gt_sum_of_all_is_below ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_covg_null_gt_ref_above ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_covg ... ok [INFO] [stdout] test filter::test::filter_status_apply_filters_to_tags_all_present ... ok [INFO] [stdout] test filter::test::filter_status_apply_filters_to_missing_tag ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_gt_conf_same_as_min ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_support_null_gt ... ok [INFO] [stdout] test filter::test::filter_low_covg ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_gt_conf_no_gt_conf_but_gt_conf_unset ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_support_same_as_min ... ok [INFO] [stdout] test filter::test::filter_high_covg_and_low_support ... ok [INFO] [stdout] test filter::test::filter_status_tags_all_fail ... ok [INFO] [stdout] test filter::test::tags_from_str ... ok [INFO] [stdout] test filter::test::filterer_add_filters_to_header_all_set ... ok [INFO] [stdout] test filter::test::filterer_add_filters_to_header_some_set ... ok [INFO] [stdout] test interval::tests::interval_op_intersect_no_intersection_end_off_by_one_check ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_long_indel_unset ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_long_indel_snp ... ok [INFO] [stdout] test interval::tests::interval_op_intersect_no_intersection_self ... ok [INFO] [stdout] test filter::test::filter_status_apply_filters_to_all_pass ... ok [INFO] [stdout] test filter::test::tags_value ... ok [INFO] [stdout] test interval::tests::interval_op_intersect_no_intersection_subset ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_gt_conf_unset ... ok [INFO] [stdout] test interval::tests::interval_op_intersect_no_intersection ... ok [INFO] [stdout] test filter::test::tags_from_str_unknown_tag ... ok [INFO] [stdout] test interval::tests::interval_op_intersect_no_intersection_start_edge ... ok [INFO] [stdout] test tests::file_prefix_one_ext ... ok [INFO] [stdout] test tests::file_prefix_two_ext ... ok [INFO] [stdout] test filter::test::filter_status_tags_some_fail ... ok [INFO] [stdout] test filter::test::filter_status_tags_none_fail ... ok [INFO] [stdout] test interval::tests::interval_op_intersect_no_intersection_end_edge ... ok [INFO] [stdout] test filter::test::filterer_add_filters_to_header_all_default_set_nothing ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_support_above ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_support_no_coverage ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_support_below ... ok [INFO] [stdout] test tests::add_extension_one_extension ... ok [INFO] [stdout] test tests::file_prefix_no_file_ext ... ok [INFO] [stdout] test tests::add_extension_empty_input ... ok [INFO] [stdout] test tests::add_extension_no_extension ... ok [INFO] [stdout] test interval::tests::interval_op_intersect_no_intersection_start_off_by_one_check ... ok [INFO] [stdout] test tests::test_record_argmatch_deletion_matches_longest ... ok [INFO] [stdout] test filter::test::filter_bcf_record_is_low_support_no_min_set ... ok [INFO] [stdout] test tests::test_record_argmatch_no_match ... ok [INFO] [stdout] test tests::test_record_argmatch_no_overlap ... ok [INFO] [stdout] test tests::test_record_argmatch_same_record ... ok [INFO] [stdout] test tests::test_record_argmatch_only_overlap_matches ... ok [INFO] [stdout] test tests::test_record_argmatch_multiple_matches_returns_longest ... ok [INFO] [stdout] test tests::test_record_argmatch_null_uses_ref ... ok [INFO] [stdout] test tests::test_record_argmatch_insertion_matches_longest ... ok [INFO] [stdout] test tests::from_path_or_where_path_isnt_executable_and_neither_is_default ... ok [INFO] [stdout] test tests::path_is_not_executable ... ok [INFO] [stdout] test tests::test_record_end ... ok [INFO] [stdout] test tests::test_record_coverage ... ok [INFO] [stdout] test tests::test_record_argmatch_single_base_insertion ... ok [INFO] [stdout] test tests::test_record_fraction_read_support_alt ... ok [INFO] [stdout] test tests::test_record_fraction_read_support_called_ref_compares_to_highest_alt ... ok [INFO] [stdout] test tests::test_record_fraction_read_support_called_alt_compares_to_ref ... ok [INFO] [stdout] test tests::test_record_fraction_read_support_is_null ... ok [INFO] [stdout] test tests::test_record_coverage_no_tag ... ok [INFO] [stdout] test tests::test_record_called_allele_is_null ... ok [INFO] [stdout] test tests::test_record_argmatch_single_base_deletion ... ok [INFO] [stdout] test tests::test_record_fraction_read_support ... ok [INFO] [stdout] test tests::path_is_executable ... ok [INFO] [stdout] test tests::test_record_gt_conf ... ok [INFO] [stdout] test tests::test_record_fraction_read_support_zero_coverage ... ok [INFO] [stdout] test tests::test_record_argmatch_only_overlap_matches_the_rest_doesnt ... ok [INFO] [stdout] test tests::from_path_or_where_path_is_none_and_default_is_executable ... ok [INFO] [stdout] test tests::from_path_or_where_path_is_executable ... ok [INFO] [stdout] test tests::test_record_gt_conf_no_tag ... ok [INFO] [stdout] test tests::test_record_is_pass ... ok [INFO] [stdout] test tests::test_record_called_allele ... ok [INFO] [stdout] test tests::test_record_rlen ... ok [INFO] [stdout] test tests::test_record_range ... ok [INFO] [stdout] test tests::from_path_or_where_path_is_none_and_default_isnt_executable ... ok [INFO] [stdout] test tests::test_record_slice_ref_iv_spans_whole_and_more ... ok [INFO] [stdout] test tests::test_record_slice_specify_non_called_allele_single_base_olap ... ok [INFO] [stdout] test tests::test_record_slice_ref_last_base ... ok [INFO] [stdout] test tests::test_record_slice_alt_iv_spans_whole_and_more ... ok [INFO] [stdout] test tests::test_record_slice_ref_first_base ... ok [INFO] [stdout] test tests::test_record_slice_no_iv_overlap_right ... ok [INFO] [stdout] test tests::from_path_or_where_path_is_none_default_isnt_executable_but_default_filename_is ... ok [INFO] [stdout] test tests::test_unwrap_or_continue ... ok [INFO] [stdout] test tests::test_record_slice_empty_iv ... ok [INFO] [stdout] test tests::test_record_slice_specify_non_called_allele_mixed_lengths ... ok [INFO] [stdout] test tests::test_record_slice_null_gt_uses_ref ... ok [INFO] [stdout] test tests::test_record_slice_specify_non_called_allele ... ok [INFO] [stdout] test tests::test_record_slice_alt_middle_base ... ok [INFO] [stdout] test tests::test_record_slice_specify_non_called_allele_out_of_bounds ... ok [INFO] [stdout] test tests::test_record_slice_no_iv_overlap_left ... ok [INFO] [stdout] test tests::path_is_executable_resolves_full_path ... FAILED [INFO] [stderr] error: test failed, to rerun pass '--lib' [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::path_is_executable_resolves_full_path stdout ---- [INFO] [stdout] thread 'tests::path_is_executable_resolves_full_path' panicked at 'called `Result::unwrap()` on an `Err` value: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/lib.rs:803:14 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55f4f2ecd7bd - std::backtrace_rs::backtrace::libunwind::trace::ha359b7f0090e2792 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5 [INFO] [stdout] 1: 0x55f4f2ecd7bd - std::backtrace_rs::backtrace::trace_unsynchronized::h0584631f25c1d70e [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55f4f2ecd7bd - std::sys_common::backtrace::_print_fmt::hdadffd97d279ff14 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:66:5 [INFO] [stdout] 3: 0x55f4f2ecd7bd - ::fmt::h26f189e611080a74 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:45:22 [INFO] [stdout] 4: 0x55f4f2ef0dbc - core::fmt::write::hfb5d11dfe037e8b7 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/fmt/mod.rs:1194:17 [INFO] [stdout] 5: 0x55f4f2ec9e71 - std::io::Write::write_fmt::h6a24ec64406df9e2 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/io/mod.rs:1655:15 [INFO] [stdout] 6: 0x55f4f2ecf505 - std::sys_common::backtrace::_print::h7a0e44402913ba60 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:48:5 [INFO] [stdout] 7: 0x55f4f2ecf505 - std::sys_common::backtrace::print::h9767dc455a84e728 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:35:9 [INFO] [stdout] 8: 0x55f4f2ecf505 - std::panicking::default_hook::{{closure}}::h60afd6c8b12988ad [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:295:22 [INFO] [stdout] 9: 0x55f4f2ecf1f4 - std::panicking::default_hook::ha7b9bac6813f9d21 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:311:9 [INFO] [stdout] 10: 0x55f4f2ecfa52 - std::panicking::rust_panic_with_hook::h7b117a162a6f8664 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:698:17 [INFO] [stdout] 11: 0x55f4f2ecf937 - std::panicking::begin_panic_handler::{{closure}}::h346750923c608600 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:588:13 [INFO] [stdout] 12: 0x55f4f2ecdc74 - std::sys_common::backtrace::__rust_end_short_backtrace::h768c56c6a0c055c0 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:138:18 [INFO] [stdout] 13: 0x55f4f2ecf669 - rust_begin_unwind [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:584:5 [INFO] [stdout] 14: 0x55f4f2b677c3 - core::panicking::panic_fmt::h5c41cb2fa118fdbc [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/panicking.rs:143:14 [INFO] [stdout] 15: 0x55f4f2b678b3 - core::result::unwrap_failed::h6bc7b183ec719494 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/result.rs:1785:5 [INFO] [stdout] 16: 0x55f4f2b86463 - core::result::Result::unwrap::h48112dc1419ae2fb [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/result.rs:1078:23 [INFO] [stdout] 17: 0x55f4f2b67d5d - drprg::tests::path_is_executable_resolves_full_path::h4efa69a4831a81ce [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:801:24 [INFO] [stdout] 18: 0x55f4f2b67cda - drprg::tests::path_is_executable_resolves_full_path::{{closure}}::h8c8f93b70d196df7 [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:799:5 [INFO] [stdout] 19: 0x55f4f2b9731e - core::ops::function::FnOnce::call_once::h75c3fa23eae71e46 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55f4f2bd9863 - core::ops::function::FnOnce::call_once::h018fc248431ce8de [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x55f4f2bd9863 - test::__rust_begin_short_backtrace::h293b982b6069d6e3 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/test/src/lib.rs:574:5 [INFO] [stdout] 22: 0x55f4f2bd8619 - as core::ops::function::FnOnce>::call_once::h4fc1be1a762c7a46 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/alloc/src/boxed.rs:1861:9 [INFO] [stdout] 23: 0x55f4f2bd8619 - as core::ops::function::FnOnce<()>>::call_once::hd44623ec51b9e897 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 24: 0x55f4f2bd8619 - std::panicking::try::do_call::ha8cfa4b025f5b832 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:492:40 [INFO] [stdout] 25: 0x55f4f2bd8619 - std::panicking::try::h664f75e41c112145 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:456:19 [INFO] [stdout] 26: 0x55f4f2bd8619 - std::panic::catch_unwind::h4932ec05cd60558e [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panic.rs:137:14 [INFO] [stdout] 27: 0x55f4f2bd8619 - test::run_test_in_process::ha14a47756671755c [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/test/src/lib.rs:597:18 [INFO] [stdout] 28: 0x55f4f2bd8619 - test::run_test::run_test_inner::{{closure}}::h0ec9e37c8f67b62d [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/test/src/lib.rs:491:39 [INFO] [stdout] 29: 0x55f4f2ba47ce - test::run_test::run_test_inner::{{closure}}::hd9d2e7f26d4f59e6 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/test/src/lib.rs:518:37 [INFO] [stdout] 30: 0x55f4f2ba47ce - std::sys_common::backtrace::__rust_begin_short_backtrace::h41c0a39fac5123f8 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys_common/backtrace.rs:122:18 [INFO] [stdout] 31: 0x55f4f2ba9d38 - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h69a02ca0bebb6eeb [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/thread/mod.rs:498:17 [INFO] [stdout] 32: 0x55f4f2ba9d38 - as core::ops::function::FnOnce<()>>::call_once::hdd05632920ce689b [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 33: 0x55f4f2ba9d38 - std::panicking::try::do_call::hb4947142729b90fd [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:492:40 [INFO] [stdout] 34: 0x55f4f2ba9d38 - std::panicking::try::h15a7e9b8394e6878 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panicking.rs:456:19 [INFO] [stdout] 35: 0x55f4f2ba9d38 - std::panic::catch_unwind::hbd3f4a3f9df49b85 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/panic.rs:137:14 [INFO] [stdout] 36: 0x55f4f2ba9d38 - std::thread::Builder::spawn_unchecked_::{{closure}}::h880b5d5f1b9799f4 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/thread/mod.rs:497:30 [INFO] [stdout] 37: 0x55f4f2ba9d38 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h304d5eaf401f5061 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 38: 0x55f4f2ed4473 - as core::ops::function::FnOnce>::call_once::hdba7f2afed0c35b3 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/alloc/src/boxed.rs:1861:9 [INFO] [stdout] 39: 0x55f4f2ed4473 - as core::ops::function::FnOnce>::call_once::h38b0832765bf7961 [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/alloc/src/boxed.rs:1861:9 [INFO] [stdout] 40: 0x55f4f2ed4473 - std::sys::unix::thread::Thread::new::thread_start::h70236dc17753425e [INFO] [stdout] at /rustc/7c13df853721b60a03e7c0bb084d2eb1e27a9caa/library/std/src/sys/unix/thread.rs:108:17 [INFO] [stdout] 41: 0x7f697f402609 - start_thread [INFO] [stdout] 42: 0x7f697f1d0163 - clone [INFO] [stdout] 43: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::path_is_executable_resolves_full_path [INFO] [stdout] [INFO] [stdout] test result: FAILED. 116 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.23s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "dd5e09f86003c583c2b2a452e3c8baac7f37270709bc55cc6d8ca0fd2a26e21a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "dd5e09f86003c583c2b2a452e3c8baac7f37270709bc55cc6d8ca0fd2a26e21a", kill_on_drop: false }` [INFO] [stdout] dd5e09f86003c583c2b2a452e3c8baac7f37270709bc55cc6d8ca0fd2a26e21a