[INFO] cloning repository https://github.com/angelovangel/fastkmers [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/angelovangel/fastkmers" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fangelovangel%2Ffastkmers", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fangelovangel%2Ffastkmers'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] e14118edde561f065dd9259ee401b39f1e6f1638 [INFO] testing angelovangel/fastkmers against beta-2022-04-10 for beta-1.61-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fangelovangel%2Ffastkmers" "/workspace/builds/worker-26/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-26/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/angelovangel/fastkmers on toolchain beta-2022-04-10 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/angelovangel/fastkmers [INFO] finished tweaking git repo https://github.com/angelovangel/fastkmers [INFO] tweaked toml for git repo https://github.com/angelovangel/fastkmers written to /workspace/builds/worker-26/source/Cargo.toml [INFO] crate git repo https://github.com/angelovangel/fastkmers already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 336e23988e4957d58b8e1713b08a70cc462575857e9d66a0ca315e96fc6c9610 [INFO] running `Command { std: "docker" "start" "-a" "336e23988e4957d58b8e1713b08a70cc462575857e9d66a0ca315e96fc6c9610", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "336e23988e4957d58b8e1713b08a70cc462575857e9d66a0ca315e96fc6c9610", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "336e23988e4957d58b8e1713b08a70cc462575857e9d66a0ca315e96fc6c9610", kill_on_drop: false }` [INFO] [stdout] 336e23988e4957d58b8e1713b08a70cc462575857e9d66a0ca315e96fc6c9610 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] bc8590c686b284b74d5e2822d49c05036cd32eee6a6ee2449edbd7af8e5ee466 [INFO] running `Command { std: "docker" "start" "-a" "bc8590c686b284b74d5e2822d49c05036cd32eee6a6ee2449edbd7af8e5ee466", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling libc v0.2.108 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling crossbeam-utils v0.8.7 [INFO] [stderr] Compiling pkg-config v0.3.23 [INFO] [stderr] Compiling crossbeam-epoch v0.9.7 [INFO] [stderr] Compiling cc v1.0.72 [INFO] [stderr] Compiling crc32fast v1.2.2 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling serde v1.0.130 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling serde_json v1.0.72 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling byteorder v1.4.3 [INFO] [stderr] Compiling hashbrown v0.11.2 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling itertools v0.10.3 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling memoffset v0.6.5 [INFO] [stderr] Compiling num-bigint v0.4.3 [INFO] [stderr] Compiling num-rational v0.4.0 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling indexmap v1.7.0 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling crossbeam-channel v0.5.2 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling getrandom v0.2.3 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling num_cpus v1.13.1 [INFO] [stderr] Compiling env_logger v0.9.0 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling flate2 v1.0.22 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand_xoshiro v0.6.0 [INFO] [stderr] Compiling rand_xorshift v0.3.0 [INFO] [stderr] Compiling rand v0.8.4 [INFO] [stderr] Compiling kseq v0.2.6 [INFO] [stderr] Compiling num-complex v0.4.0 [INFO] [stderr] Compiling rand_distr v0.4.2 [INFO] [stderr] Compiling num v0.4.0 [INFO] [stderr] Compiling probminhash v0.1.5 [INFO] [stderr] Compiling fastkmers v0.1.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 11.44s [INFO] running `Command { std: "docker" "inspect" "bc8590c686b284b74d5e2822d49c05036cd32eee6a6ee2449edbd7af8e5ee466", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bc8590c686b284b74d5e2822d49c05036cd32eee6a6ee2449edbd7af8e5ee466", kill_on_drop: false }` [INFO] [stdout] bc8590c686b284b74d5e2822d49c05036cd32eee6a6ee2449edbd7af8e5ee466 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] bda84410b75b41d095547fb0039bca03a62933352c72679e6a66034a1e9b9d2f [INFO] running `Command { std: "docker" "start" "-a" "bda84410b75b41d095547fb0039bca03a62933352c72679e6a66034a1e9b9d2f", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling proc-macro2 v1.0.32 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling syn v1.0.82 [INFO] [stderr] Compiling serde_derive v1.0.130 [INFO] [stderr] Compiling serde v1.0.130 [INFO] [stderr] Compiling escargot v0.3.1 [INFO] [stderr] Compiling predicates-core v1.0.2 [INFO] [stderr] Compiling termtree v0.2.3 [INFO] [stderr] Compiling normalize-line-endings v0.3.0 [INFO] [stderr] Compiling difference v2.0.0 [INFO] [stderr] Compiling float-cmp v0.8.0 [INFO] [stderr] Compiling predicates-tree v1.0.4 [INFO] [stderr] Compiling predicates v1.0.8 [INFO] [stderr] Compiling quote v1.0.10 [INFO] [stderr] Compiling serde_json v1.0.72 [INFO] [stderr] Compiling fastkmers v0.1.3 (/opt/rustwide/workdir) [INFO] [stderr] Compiling assert_cmd v0.10.2 [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 18.31s [INFO] [stderr] Executable unittests src/lib.rs (/opt/rustwide/target/debug/deps/fastkmers-da1d0c9dc8c7f159) [INFO] [stderr] Executable unittests src/main.rs (/opt/rustwide/target/debug/deps/fastkmers-4a10d9a596a21b1b) [INFO] [stderr] Executable tests/cli.rs (/opt/rustwide/target/debug/deps/cli-9ab47af7a7699380) [INFO] running `Command { std: "docker" "inspect" "bda84410b75b41d095547fb0039bca03a62933352c72679e6a66034a1e9b9d2f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bda84410b75b41d095547fb0039bca03a62933352c72679e6a66034a1e9b9d2f", kill_on_drop: false }` [INFO] [stdout] bda84410b75b41d095547fb0039bca03a62933352c72679e6a66034a1e9b9d2f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-26/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] e6fda9653835f7973ba1023b5c231d9973845cdad32cb249f66a04a5b2f54d82 [INFO] running `Command { std: "docker" "start" "-a" "e6fda9653835f7973ba1023b5c231d9973845cdad32cb249f66a04a5b2f54d82", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.05s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/fastkmers-da1d0c9dc8c7f159) [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/fastkmers-4a10d9a596a21b1b) [INFO] [stdout] running 0 tests [INFO] [stderr] Running tests/cli.rs (/opt/rustwide/target/debug/deps/cli-9ab47af7a7699380) [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test test_freq ... ok [INFO] [stdout] test test_kmer_fastq ... ok [INFO] [stdout] test test_regex ... ok [INFO] [stdout] test test_kmer_fasta ... ok [INFO] [stdout] test test_cycle ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 11.47s [INFO] [stdout] [INFO] [stderr] Doc-tests fastkmers [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "e6fda9653835f7973ba1023b5c231d9973845cdad32cb249f66a04a5b2f54d82", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e6fda9653835f7973ba1023b5c231d9973845cdad32cb249f66a04a5b2f54d82", kill_on_drop: false }` [INFO] [stdout] e6fda9653835f7973ba1023b5c231d9973845cdad32cb249f66a04a5b2f54d82