[INFO] cloning repository https://github.com/URI-ABD/genomic_distance [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/URI-ABD/genomic_distance" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FURI-ABD%2Fgenomic_distance", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FURI-ABD%2Fgenomic_distance'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 4c1b7afcda5ed9dd2d4704269275c7dcff4fae7d [INFO] testing URI-ABD/genomic_distance against beta-2022-04-10 for beta-1.61-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FURI-ABD%2Fgenomic_distance" "/workspace/builds/worker-32/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-32/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/URI-ABD/genomic_distance on toolchain beta-2022-04-10 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/URI-ABD/genomic_distance [INFO] finished tweaking git repo https://github.com/URI-ABD/genomic_distance [INFO] tweaked toml for git repo https://github.com/URI-ABD/genomic_distance written to /workspace/builds/worker-32/source/Cargo.toml [INFO] crate git repo https://github.com/URI-ABD/genomic_distance already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 02181cd5f7fd0f991aa078279a11bc8adaebf854c5338d1935f30304a2e560cf [INFO] running `Command { std: "docker" "start" "-a" "02181cd5f7fd0f991aa078279a11bc8adaebf854c5338d1935f30304a2e560cf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "02181cd5f7fd0f991aa078279a11bc8adaebf854c5338d1935f30304a2e560cf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "02181cd5f7fd0f991aa078279a11bc8adaebf854c5338d1935f30304a2e560cf", kill_on_drop: false }` [INFO] [stdout] 02181cd5f7fd0f991aa078279a11bc8adaebf854c5338d1935f30304a2e560cf [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 8e0e7670064421069771281d726ba62de6e94d632577934a6f301a929f203e52 [INFO] running `Command { std: "docker" "start" "-a" "8e0e7670064421069771281d726ba62de6e94d632577934a6f301a929f203e52", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling autocfg v1.0.0 [INFO] [stderr] Compiling proc-macro2 v1.0.10 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling syn v1.0.17 [INFO] [stderr] Compiling libc v0.2.68 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling autocfg v0.1.7 [INFO] [stderr] Compiling rand_core v0.4.2 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling serde v1.0.105 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling maybe-uninit v2.0.0 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling cc v1.0.50 [INFO] [stderr] Compiling rustversion v1.0.2 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Compiling ryu v1.0.3 [INFO] [stderr] Compiling either v1.5.3 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling ndarray v0.13.0 [INFO] [stderr] Compiling regex-syntax v0.6.17 [INFO] [stderr] Compiling unicode-segmentation v1.6.0 [INFO] [stderr] Compiling standback v0.2.2 [INFO] [stderr] Compiling rayon-core v1.7.0 [INFO] [stderr] Compiling rustc-demangle v0.1.16 [INFO] [stderr] Compiling proc-macro-hack v0.5.15 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling ordermap v0.3.5 [INFO] [stderr] Compiling bit-vec v0.5.1 [INFO] [stderr] Compiling fixedbitset v0.1.9 [INFO] [stderr] Compiling itoa v0.4.5 [INFO] [stderr] Compiling bio v0.30.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling strum v0.16.0 [INFO] [stderr] Compiling bytecount v0.6.0 [INFO] [stderr] Compiling fnv v1.0.6 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling rand_core v0.3.1 [INFO] [stderr] Compiling rand_jitter v0.1.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling rand_pcg v0.1.2 [INFO] [stderr] Compiling rand_chacha v0.1.1 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Compiling bit-set v0.5.1 [INFO] [stderr] Compiling rand_hc v0.1.0 [INFO] [stderr] Compiling rand_xorshift v0.1.1 [INFO] [stderr] Compiling rand_isaac v0.1.1 [INFO] [stderr] Compiling petgraph v0.4.13 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling num-traits v0.2.11 [INFO] [stderr] Compiling num-integer v0.1.42 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling memoffset v0.5.4 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-bigint v0.2.6 [INFO] [stderr] Compiling num-rational v0.2.4 [INFO] [stderr] Compiling num-iter v0.1.40 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling aho-corasick v0.7.10 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling backtrace-sys v0.1.35 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling rand_os v0.1.3 [INFO] [stderr] Compiling num_cpus v1.12.0 [INFO] [stderr] Compiling quote v1.0.3 [INFO] [stderr] Compiling crossbeam-queue v0.2.1 [INFO] [stderr] Compiling backtrace v0.3.46 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling ordered-float v1.0.2 [INFO] [stderr] Compiling float-cmp v0.6.0 [INFO] [stderr] Compiling crossbeam-deque v0.7.3 [INFO] [stderr] Compiling statrs v0.11.0 [INFO] [stderr] Compiling regex v1.3.6 [INFO] [stderr] Compiling rayon v1.3.0 [INFO] [stderr] Compiling num v0.2.1 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling snafu v0.5.0 [INFO] [stderr] Compiling serde_derive v1.0.105 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling time-macros-impl v0.1.0 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling strum_macros v0.16.0 [INFO] [stderr] Compiling time v0.2.9 [INFO] [stderr] Compiling time-macros v0.1.0 [INFO] [stderr] Compiling bstr v0.2.12 [INFO] [stderr] Compiling multimap v0.6.0 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling bio-types v0.6.0 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling genomic_distance v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 35.34s [INFO] running `Command { std: "docker" "inspect" "8e0e7670064421069771281d726ba62de6e94d632577934a6f301a929f203e52", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8e0e7670064421069771281d726ba62de6e94d632577934a6f301a929f203e52", kill_on_drop: false }` [INFO] [stdout] 8e0e7670064421069771281d726ba62de6e94d632577934a6f301a929f203e52 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 535cb43bca9b42d16faf67be7d24161e327349af7aa8018ac564420f5f471f4e [INFO] running `Command { std: "docker" "start" "-a" "535cb43bca9b42d16faf67be7d24161e327349af7aa8018ac564420f5f471f4e", kill_on_drop: false }` [INFO] [stderr] Compiling genomic_distance v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.63s [INFO] [stderr] Executable unittests src/main.rs (/opt/rustwide/target/debug/deps/genomic_distance-77561bc56866d1fb) [INFO] running `Command { std: "docker" "inspect" "535cb43bca9b42d16faf67be7d24161e327349af7aa8018ac564420f5f471f4e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "535cb43bca9b42d16faf67be7d24161e327349af7aa8018ac564420f5f471f4e", kill_on_drop: false }` [INFO] [stdout] 535cb43bca9b42d16faf67be7d24161e327349af7aa8018ac564420f5f471f4e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 76f464d26e100ac2f027d696889ad84c0f84bb5d551ccea0885cea6e1b84f082 [INFO] running `Command { std: "docker" "start" "-a" "76f464d26e100ac2f027d696889ad84c0f84bb5d551ccea0885cea6e1b84f082", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.11s [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/genomic_distance-77561bc56866d1fb) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "76f464d26e100ac2f027d696889ad84c0f84bb5d551ccea0885cea6e1b84f082", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "76f464d26e100ac2f027d696889ad84c0f84bb5d551ccea0885cea6e1b84f082", kill_on_drop: false }` [INFO] [stdout] 76f464d26e100ac2f027d696889ad84c0f84bb5d551ccea0885cea6e1b84f082