[INFO] cloning repository https://github.com/Arkanosis/bamrescue [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Arkanosis/bamrescue" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FArkanosis%2Fbamrescue", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FArkanosis%2Fbamrescue'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 153a6179597bbaf1868d9f1686db6d27583fd6e0 [INFO] testing Arkanosis/bamrescue against beta-2022-04-10 for beta-1.61-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FArkanosis%2Fbamrescue" "/workspace/builds/worker-1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/Arkanosis/bamrescue on toolchain beta-2022-04-10 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/Arkanosis/bamrescue [INFO] finished tweaking git repo https://github.com/Arkanosis/bamrescue [INFO] tweaked toml for git repo https://github.com/Arkanosis/bamrescue written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate git repo https://github.com/Arkanosis/bamrescue already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-04-10" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 8705d038bb3d63deb25e5ec378164bf9062f1f62ea5f3a941e2b4d9239ff0d1a [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "8705d038bb3d63deb25e5ec378164bf9062f1f62ea5f3a941e2b4d9239ff0d1a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "8705d038bb3d63deb25e5ec378164bf9062f1f62ea5f3a941e2b4d9239ff0d1a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8705d038bb3d63deb25e5ec378164bf9062f1f62ea5f3a941e2b4d9239ff0d1a", kill_on_drop: false }` [INFO] [stdout] 8705d038bb3d63deb25e5ec378164bf9062f1f62ea5f3a941e2b4d9239ff0d1a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 02270b9d108a478ac8a1458ca515ada901f744e50c3eaf2250432a3d3d7d4fcb [INFO] running `Command { std: "docker" "start" "-a" "02270b9d108a478ac8a1458ca515ada901f744e50c3eaf2250432a3d3d7d4fcb", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.91 [INFO] [stderr] Compiling syn v1.0.64 [INFO] [stderr] Compiling regex-syntax v0.6.23 [INFO] [stderr] Compiling build_const v0.2.1 [INFO] [stderr] Compiling serde v1.0.125 [INFO] [stderr] Compiling inflate v0.4.5 [INFO] [stderr] Compiling crc v1.8.1 [INFO] [stderr] Compiling terminal_size v0.1.16 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling futures-cpupool v0.1.8 [INFO] [stderr] Compiling regex v1.4.5 [INFO] [stderr] Compiling console v0.14.1 [INFO] [stderr] Compiling serde_derive v1.0.125 [INFO] [stderr] Compiling indicatif v0.15.0 [INFO] [stderr] Compiling docopt v1.1.1 [INFO] [stderr] Compiling bamrescue v0.3.0-dev (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 32.81s [INFO] running `Command { std: "docker" "inspect" "02270b9d108a478ac8a1458ca515ada901f744e50c3eaf2250432a3d3d7d4fcb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "02270b9d108a478ac8a1458ca515ada901f744e50c3eaf2250432a3d3d7d4fcb", kill_on_drop: false }` [INFO] [stdout] 02270b9d108a478ac8a1458ca515ada901f744e50c3eaf2250432a3d3d7d4fcb [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 8602f86b1f3cbb5d3cd7fd1d512d622c92d9e16f662154cfe281c13f3a1174eb [INFO] running `Command { std: "docker" "start" "-a" "8602f86b1f3cbb5d3cd7fd1d512d622c92d9e16f662154cfe281c13f3a1174eb", kill_on_drop: false }` [INFO] [stderr] Compiling bamrescue v0.3.0-dev (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 4.15s [INFO] [stderr] Executable unittests src/lib.rs (/opt/rustwide/target/debug/deps/bamrescue-e9762d3c64ea4eea) [INFO] [stderr] Executable unittests src/main.rs (/opt/rustwide/target/debug/deps/bamrescue-6097ac6401dc9069) [INFO] [stderr] Executable tests/check.rs (/opt/rustwide/target/debug/deps/check-aad9001abd2ab5b8) [INFO] [stderr] Executable tests/common.rs (/opt/rustwide/target/debug/deps/common-1d4d4a3204e6b2ae) [INFO] [stderr] Executable tests/rescue.rs (/opt/rustwide/target/debug/deps/rescue-994fc1ef7d662045) [INFO] [stderr] Executable tests/version.rs (/opt/rustwide/target/debug/deps/version-5fd54b3ff68aeb29) [INFO] running `Command { std: "docker" "inspect" "8602f86b1f3cbb5d3cd7fd1d512d622c92d9e16f662154cfe281c13f3a1174eb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8602f86b1f3cbb5d3cd7fd1d512d622c92d9e16f662154cfe281c13f3a1174eb", kill_on_drop: false }` [INFO] [stdout] 8602f86b1f3cbb5d3cd7fd1d512d622c92d9e16f662154cfe281c13f3a1174eb [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-04-10" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 99d51cafc2d5ddbcf17105885ad1d9df23be2db739c7311b95c67c50ea4b085d [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "99d51cafc2d5ddbcf17105885ad1d9df23be2db739c7311b95c67c50ea4b085d", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.05s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/bamrescue-e9762d3c64ea4eea) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/bamrescue-6097ac6401dc9069) [INFO] [stdout] [INFO] [stderr] Running tests/check.rs (/opt/rustwide/target/debug/deps/check-aad9001abd2ab5b8) [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 26 tests [INFO] [stdout] test empty_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test empty_file ... ok [INFO] [stdout] test single_block_missing_gzip_identifier ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test single_block_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_after_bam ... ok [INFO] [stdout] test single_block_missing_bgzf_identifier ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_size_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test three_blocks_too_small_bgzf_size_bam ... ok [INFO] [stdout] test three_blocks_empty_inside_bam ... ok [INFO] [stdout] test two_blocks_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_crc32_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test empty_bam ... ok [INFO] [stdout] test two_blocks_missing_empty_bam ... ok [INFO] [stdout] test three_blocks_bam ... ok [INFO] [stdout] test three_blocks_too_large_bgzf_size_bam ... ok [INFO] [stdout] test single_block_missing_empty_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_before_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 26 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.26s [INFO] [stdout] [INFO] [stderr] Running tests/common.rs (/opt/rustwide/target/debug/deps/common-1d4d4a3204e6b2ae) [INFO] [stdout] [INFO] [stderr] Running tests/rescue.rs (/opt/rustwide/target/debug/deps/rescue-994fc1ef7d662045) [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 26 tests [INFO] [stdout] test empty_file ... ok [INFO] [stdout] test empty_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_after_bam ... ok [INFO] [stdout] test single_block_missing_gzip_identifier ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test single_block_missing_empty_bam ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_size_bam ... ok [INFO] [stdout] test three_blocks_too_small_bgzf_size_bam ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_crc32_bam ... ok [INFO] [stdout] test three_blocks_empty_inside_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_before_bam ... ok [INFO] [stdout] test single_block_bam ... ok [INFO] [stdout] test three_blocks_too_large_bgzf_size_bam ... ok [INFO] [stdout] test single_block_missing_bgzf_identifier ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test three_blocks_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test two_blocks_bam ... ok [INFO] [stdout] test two_blocks_missing_empty_bam ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 26 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.35s [INFO] [stdout] [INFO] [stderr] Running tests/version.rs (/opt/rustwide/target/debug/deps/version-5fd54b3ff68aeb29) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stderr] Doc-tests bamrescue [INFO] [stdout] test version ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "99d51cafc2d5ddbcf17105885ad1d9df23be2db739c7311b95c67c50ea4b085d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "99d51cafc2d5ddbcf17105885ad1d9df23be2db739c7311b95c67c50ea4b085d", kill_on_drop: false }` [INFO] [stdout] 99d51cafc2d5ddbcf17105885ad1d9df23be2db739c7311b95c67c50ea4b085d