[INFO] fetching crate rust_sbml 0.7.0... [INFO] testing rust_sbml-0.7.0 against 1.60.0 for beta-1.61-1 [INFO] extracting crate rust_sbml 0.7.0 into /workspace/builds/worker-13/source [INFO] validating manifest of crates.io crate rust_sbml 0.7.0 on toolchain 1.60.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate rust_sbml 0.7.0 [INFO] finished tweaking crates.io crate rust_sbml 0.7.0 [INFO] tweaked toml for crates.io crate rust_sbml 0.7.0 written to /workspace/builds/worker-13/source/Cargo.toml [INFO] crate crates.io crate rust_sbml 0.7.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded pyo3 v0.14.5 [INFO] [stderr] Downloaded pyo3-build-config v0.14.5 [INFO] [stderr] Downloaded pyo3-macros v0.14.5 [INFO] [stderr] Downloaded quick-xml v0.23.0-alpha3 [INFO] [stderr] Downloaded pyo3-macros-backend v0.14.5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 702a927b75319f6bdce0bbc44709091ec50802a028d97cdf7934784ac9ee8d06 [INFO] running `Command { std: "docker" "start" "-a" "702a927b75319f6bdce0bbc44709091ec50802a028d97cdf7934784ac9ee8d06", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "702a927b75319f6bdce0bbc44709091ec50802a028d97cdf7934784ac9ee8d06", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "702a927b75319f6bdce0bbc44709091ec50802a028d97cdf7934784ac9ee8d06", kill_on_drop: false }` [INFO] [stdout] 702a927b75319f6bdce0bbc44709091ec50802a028d97cdf7934784ac9ee8d06 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f1c1412240d622266753438c11f5a9f09ac7e3956e032ab060a1422053cc821c [INFO] running `Command { std: "docker" "start" "-a" "f1c1412240d622266753438c11f5a9f09ac7e3956e032ab060a1422053cc821c", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling proc-macro2 v1.0.32 [INFO] [stderr] Compiling syn v1.0.81 [INFO] [stderr] Compiling pyo3-build-config v0.14.5 [INFO] [stderr] Compiling libc v0.2.106 [INFO] [stderr] Compiling unindent v0.1.7 [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Compiling paste v0.1.18 [INFO] [stderr] Compiling quote v1.0.10 [INFO] [stderr] Compiling parking_lot_core v0.8.5 [INFO] [stderr] Compiling parking_lot v0.11.2 [INFO] [stderr] Compiling pyo3 v0.14.5 [INFO] [stderr] Compiling pyo3-macros-backend v0.14.5 [INFO] [stderr] Compiling serde_derive v1.0.130 [INFO] [stderr] Compiling indoc-impl v0.3.6 [INFO] [stderr] Compiling pyo3-macros v0.14.5 [INFO] [stderr] Compiling indoc v0.3.6 [INFO] [stderr] Compiling serde v1.0.130 [INFO] [stderr] Compiling quick-xml v0.23.0-alpha3 [INFO] [stderr] Compiling rust_sbml v0.7.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 20.66s [INFO] running `Command { std: "docker" "inspect" "f1c1412240d622266753438c11f5a9f09ac7e3956e032ab060a1422053cc821c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f1c1412240d622266753438c11f5a9f09ac7e3956e032ab060a1422053cc821c", kill_on_drop: false }` [INFO] [stdout] f1c1412240d622266753438c11f5a9f09ac7e3956e032ab060a1422053cc821c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 25a70683e79f27c27658e70254bdc70edcdd3992c9f5f4c37809a7750f70f175 [INFO] running `Command { std: "docker" "start" "-a" "25a70683e79f27c27658e70254bdc70edcdd3992c9f5f4c37809a7750f70f175", kill_on_drop: false }` [INFO] [stderr] Compiling rust_sbml v0.7.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 4.17s [INFO] running `Command { std: "docker" "inspect" "25a70683e79f27c27658e70254bdc70edcdd3992c9f5f4c37809a7750f70f175", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "25a70683e79f27c27658e70254bdc70edcdd3992c9f5f4c37809a7750f70f175", kill_on_drop: false }` [INFO] [stdout] 25a70683e79f27c27658e70254bdc70edcdd3992c9f5f4c37809a7750f70f175 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] bb5b071bb41ed02f4eae6c5389dc305cf1a7522ab756290bb1ef95657ec7412f [INFO] running `Command { std: "docker" "start" "-a" "bb5b071bb41ed02f4eae6c5389dc305cf1a7522ab756290bb1ef95657ec7412f", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.02s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/rust_sbml-21814f4e39b52454) [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test pyo::tests::it_works ... ok [INFO] [stdout] test tests::parse_minimal_model_with_reactions ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/tests.rs (/opt/rustwide/target/debug/deps/tests-dc815367367141c8) [INFO] [stdout] [INFO] [stdout] running 8 tests [INFO] [stdout] test read_units_succeed ... ok [INFO] [stdout] test test_constraints ... ok [INFO] [stdout] test read_abstraction_objective_succeeds ... ok [INFO] [stdout] test model_has_more_species_annotations_species ... ok [INFO] [stdout] test glc_retrieves_corect_formula ... ok [INFO] [stdout] test reaction_annotation_is_parsed ... ok [INFO] [stdout] test model_has_annotations ... ok [INFO] [stdout] test read_model_raw_objective_succeeds ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.13s [INFO] [stdout] [INFO] [stderr] Doc-tests rust_sbml [INFO] [stdout] [INFO] [stdout] running 17 tests [INFO] [stderr] error: test failed, to rerun pass '--doc' [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `rustdoc --edition=2018 --crate-type cdylib --crate-type rlib --crate-name rust_sbml --test /opt/rustwide/workdir/src/lib.rs -L dependency=/opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern itertools=/opt/rustwide/target/debug/deps/libitertools-b8bce04b1586fe7d.rlib --extern pyo3=/opt/rustwide/target/debug/deps/libpyo3-31bd55bed76e51e0.rlib --extern quick_xml=/opt/rustwide/target/debug/deps/libquick_xml-7482713bb9998316.rlib --extern rust_sbml=/opt/rustwide/target/debug/deps/librust_sbml.rlib --extern serde=/opt/rustwide/target/debug/deps/libserde-f47a03d448df3022.rlib -C embed-bitcode=no --cfg 'feature="default"' --cfg 'feature="extension-module"' --cfg 'feature="pyo3"' --error-format human` (signal: 9, SIGKILL: kill) [INFO] running `Command { std: "docker" "inspect" "bb5b071bb41ed02f4eae6c5389dc305cf1a7522ab756290bb1ef95657ec7412f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bb5b071bb41ed02f4eae6c5389dc305cf1a7522ab756290bb1ef95657ec7412f", kill_on_drop: false }` [INFO] [stdout] bb5b071bb41ed02f4eae6c5389dc305cf1a7522ab756290bb1ef95657ec7412f