[INFO] fetching crate msbwt2 0.3.0...
[INFO] testing msbwt2-0.3.0 against 1.60.0 for beta-1.61-1
[INFO] extracting crate msbwt2 0.3.0 into /workspace/builds/worker-119/source
[INFO] validating manifest of crates.io crate msbwt2 0.3.0 on toolchain 1.60.0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate msbwt2 0.3.0
[INFO] finished tweaking crates.io crate msbwt2 0.3.0
[INFO] tweaked toml for crates.io crate msbwt2 0.3.0 written to /workspace/builds/worker-119/source/Cargo.toml
[INFO] crate crates.io crate msbwt2 0.3.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 6723bb78bd54a32b3e0ad138b5c7528653adea1a994b9fe946e15a94a7916dbe
[INFO] running `Command { std: "docker" "start" "-a" "6723bb78bd54a32b3e0ad138b5c7528653adea1a994b9fe946e15a94a7916dbe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "6723bb78bd54a32b3e0ad138b5c7528653adea1a994b9fe946e15a94a7916dbe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6723bb78bd54a32b3e0ad138b5c7528653adea1a994b9fe946e15a94a7916dbe", kill_on_drop: false }`
[INFO] [stdout] 6723bb78bd54a32b3e0ad138b5c7528653adea1a994b9fe946e15a94a7916dbe
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 8289ea1c994e65d46b2c531600d87e235dd81e7ebffc3c5b979282e625491f88
[INFO] running `Command { std: "docker" "start" "-a" "8289ea1c994e65d46b2c531600d87e235dd81e7ebffc3c5b979282e625491f88", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling cc v1.0.72
[INFO] [stderr]    Compiling libc v0.2.116
[INFO] [stderr]    Compiling pkg-config v0.3.24
[INFO] [stderr]    Compiling crc32fast v1.3.1
[INFO] [stderr]    Compiling serde v1.0.136
[INFO] [stderr]    Compiling log v0.4.14
[INFO] [stderr]    Compiling serde_json v1.0.78
[INFO] [stderr]    Compiling regex-syntax v0.6.25
[INFO] [stderr]    Compiling safemem v0.3.3
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[INFO] [stderr]    Compiling termcolor v1.1.2
[INFO] [stderr]    Compiling humantime v2.1.0
[INFO] [stderr]    Compiling exitcode v1.1.2
[INFO] [stderr]    Compiling arrayvec v0.7.2
[INFO] [stderr]    Compiling miniz_oxide v0.4.4
[INFO] [stderr]    Compiling aho-corasick v0.7.18
[INFO] [stderr]    Compiling buf_redux v0.8.4
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.17
[INFO] [stderr]    Compiling libmimalloc-sys v0.1.23
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling regex v1.5.4
[INFO] [stderr]    Compiling flate2 v1.0.22
[INFO] [stderr]    Compiling clap v2.34.0
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[INFO] [stderr]    Compiling bzip2 v0.4.3
[INFO] [stderr]    Compiling mimalloc v0.1.27
[INFO] [stderr]    Compiling needletail v0.4.1
[INFO] [stderr]    Compiling env_logger v0.9.0
[INFO] [stderr]    Compiling msbwt2 v0.3.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 21.62s
[INFO] running `Command { std: "docker" "inspect" "8289ea1c994e65d46b2c531600d87e235dd81e7ebffc3c5b979282e625491f88", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8289ea1c994e65d46b2c531600d87e235dd81e7ebffc3c5b979282e625491f88", kill_on_drop: false }`
[INFO] [stdout] 8289ea1c994e65d46b2c531600d87e235dd81e7ebffc3c5b979282e625491f88
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 965c7cffabe468bd3e046ee6c797a61aa00e9a063e343fa03304bdb412cec1e4
[INFO] running `Command { std: "docker" "start" "-a" "965c7cffabe468bd3e046ee6c797a61aa00e9a063e343fa03304bdb412cec1e4", kill_on_drop: false }`
[INFO] [stderr]    Compiling crossbeam-utils v0.8.6
[INFO] [stderr]    Compiling semver v1.0.4
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.6
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[INFO] [stderr]    Compiling syn v1.0.86
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[INFO] [stderr]    Compiling oorandom v11.1.3
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[INFO] [stderr]    Compiling remove_dir_all v0.5.3
[INFO] [stderr]    Compiling rand_core v0.6.3
[INFO] [stderr]    Compiling memoffset v0.6.5
[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling rayon v1.5.1
[INFO] [stderr]    Compiling itertools v0.10.3
[INFO] [stderr]    Compiling getrandom v0.1.16
[INFO] [stderr]    Compiling num_cpus v1.13.1
[INFO] [stderr]    Compiling csv-core v0.1.10
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[INFO] [stderr]    Compiling rand_chacha v0.2.2
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[INFO] [stderr]    Compiling serde_derive v1.0.136
[INFO] [stderr]    Compiling criterion v0.3.5
[INFO] [stderr]    Compiling msbwt2 v0.3.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 25.23s
[INFO] running `Command { std: "docker" "inspect" "965c7cffabe468bd3e046ee6c797a61aa00e9a063e343fa03304bdb412cec1e4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "965c7cffabe468bd3e046ee6c797a61aa00e9a063e343fa03304bdb412cec1e4", kill_on_drop: false }`
[INFO] [stdout] 965c7cffabe468bd3e046ee6c797a61aa00e9a063e343fa03304bdb412cec1e4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-119/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 15b1d800c694f7fdc8780bcf2b15b4eed3363bae2b5a4d9499fd007c998b1c2c
[INFO] running `Command { std: "docker" "start" "-a" "15b1d800c694f7fdc8780bcf2b15b4eed3363bae2b5a4d9499fd007c998b1c2c", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.41s
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/msbwt2-283ce1b62f51a3bb)
[INFO] [stdout] 
[INFO] [stdout] running 44 tests
[INFO] [stdout] test bwt_converter::tests::test_bwt_conversion ... ok
[INFO] [stdout] test bwt_converter::tests::test_convert_to_vec ... ok
[INFO] [stdout] test bwt_converter::tests::test_newline ... ok
[INFO] [stdout] test bwt_util::tests::test_basic ... ok
[INFO] [stdout] test bwt_util::tests::test_cycle_breaker ... ok
[INFO] [stdout] test bwt_util::tests::test_diff_len ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_constrain_range ... ok
[INFO] [stdout] test bwt_converter::tests::test_save_bwt_numpy ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_init ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_load_and_add ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_count_kmer ... ok
[INFO] [stdout] test bwt_converter::tests::test_compression ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_create_from_fastx ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_multi_string_sorted ... ok
[INFO] [stdout] test bwt_converter::tests::test_save_bwt_runs_numpy ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_load_dynamicbwt_from_vec ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_run_iter ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_multi_length ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_multi_string_unsorted ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_single_string ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_failure_case_001 ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_failure_case_003 ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_failure_case_002 ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_init ... ok
[INFO] [stdout] test rle_bwt::tests::test_fmindex ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_load_dynamicbwt_from_npy ... ok
[INFO] [stdout] test rle_bwt::tests::test_count_kmer ... ok
[INFO] [stdout] test rle_bwt::tests::test_constrain_range ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_block_failure_001 ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_simple_inserts ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_increment_run ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_block_splits ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_insert ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_init ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_insert_splitting ... ok
[INFO] [stdout] test string_util::tests::test_convert_itos ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_to_vec ... ok
[INFO] [stdout] test string_util::tests::test_convert_stoi ... ok
[INFO] [stdout] test string_util::tests::test_reverse_complement_i ... ok
[INFO] [stdout] test string_util::tests::test_simple_index ... ok
[INFO] [stdout] test rle_bwt::tests::test_load_rlebwt_from_npy ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_sampled_bwt ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_run_iter ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_10krandom_insert ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 44 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 29.30s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/msbwt2_build-89d976de1c4d91c6)
[INFO] [stdout] 
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/msbwt2_convert-4a6da0f11ae56090)
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests msbwt2
[INFO] [stdout] 
[INFO] [stdout] running 36 tests
[INFO] [stdout] test src/dynamic_bwt.rs - dynamic_bwt::DynamicBWT::iter (line 399) ... FAILED
[INFO] [stdout] test src/dynamic_bwt.rs - dynamic_bwt::create_from_fastx (line 439) ... FAILED
[INFO] [stderr] error: test failed, to rerun pass '--doc'
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `rustdoc --edition=2018 --crate-type lib --crate-name msbwt2 --test /opt/rustwide/workdir/src/lib.rs -L dependency=/opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps -L native=/opt/rustwide/target/debug/build/bzip2-sys-8c6c524cb86142ad/out/lib -L native=/opt/rustwide/target/debug/build/libmimalloc-sys-7f8642eba624ba33/out -L native=/usr/lib/x86_64-linux-gnu --extern arrayvec=/opt/rustwide/target/debug/deps/libarrayvec-f183e888f2be8ffb.rlib --extern clap=/opt/rustwide/target/debug/deps/libclap-6bd70c2d0364e1b0.rlib --extern criterion=/opt/rustwide/target/debug/deps/libcriterion-df004c22dac0fa11.rlib --extern env_logger=/opt/rustwide/target/debug/deps/libenv_logger-21f0902b158d1245.rlib --extern exitcode=/opt/rustwide/target/debug/deps/libexitcode-1e70a3a20ba04881.rlib --extern log=/opt/rustwide/target/debug/deps/liblog-82c0db7e24d48d9b.rlib --extern mimalloc=/opt/rustwide/target/debug/deps/libmimalloc-205a95b4641325ea.rlib --extern msbwt2=/opt/rustwide/target/debug/deps/libmsbwt2-2db1705ef0ad3da3.rlib --extern needletail=/opt/rustwide/target/debug/deps/libneedletail-a70f870f55f52245.rlib --extern rand=/opt/rustwide/target/debug/deps/librand-7497e2dccf9aa7a1.rlib --extern rand_core=/opt/rustwide/target/debug/deps/librand_core-44b4d09058cb08e4.rlib --extern serde_json=/opt/rustwide/target/debug/deps/libserde_json-80117e7e92bd2714.rlib --extern tempfile=/opt/rustwide/target/debug/deps/libtempfile-db26ba3314284009.rlib -C embed-bitcode=no --error-format human` (signal: 9, SIGKILL: kill)
[INFO] running `Command { std: "docker" "inspect" "15b1d800c694f7fdc8780bcf2b15b4eed3363bae2b5a4d9499fd007c998b1c2c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "15b1d800c694f7fdc8780bcf2b15b4eed3363bae2b5a4d9499fd007c998b1c2c", kill_on_drop: false }`
[INFO] [stdout] 15b1d800c694f7fdc8780bcf2b15b4eed3363bae2b5a4d9499fd007c998b1c2c