[INFO] fetching crate kseq 0.2.7... [INFO] testing kseq-0.2.7 against 1.60.0 for beta-1.61-1 [INFO] extracting crate kseq 0.2.7 into /workspace/builds/worker-21/source [INFO] validating manifest of crates.io crate kseq 0.2.7 on toolchain 1.60.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate kseq 0.2.7 [INFO] finished tweaking crates.io crate kseq 0.2.7 [INFO] tweaked toml for crates.io crate kseq 0.2.7 written to /workspace/builds/worker-21/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded xz2 v0.1.6 [INFO] [stderr] Downloaded needletail v0.4.1 [INFO] [stderr] Downloaded lzma-sys v0.1.17 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-21/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-21/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 5f188fdbc82b807eab70bd41b765caf833a71a2acc27f7ceddff8dfe087a10d3 [INFO] running `Command { std: "docker" "start" "-a" "5f188fdbc82b807eab70bd41b765caf833a71a2acc27f7ceddff8dfe087a10d3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "5f188fdbc82b807eab70bd41b765caf833a71a2acc27f7ceddff8dfe087a10d3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5f188fdbc82b807eab70bd41b765caf833a71a2acc27f7ceddff8dfe087a10d3", kill_on_drop: false }` [INFO] [stdout] 5f188fdbc82b807eab70bd41b765caf833a71a2acc27f7ceddff8dfe087a10d3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-21/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-21/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f5399792b91dbcf099a7169a6018eff68f96e7c3522e0b6e3ab207a8c1717a77 [INFO] running `Command { std: "docker" "start" "-a" "f5399792b91dbcf099a7169a6018eff68f96e7c3522e0b6e3ab207a8c1717a77", kill_on_drop: false }` [INFO] [stderr] Compiling cc v1.0.73 [INFO] [stderr] Compiling crc32fast v1.3.2 [INFO] [stderr] Compiling adler v1.0.2 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling miniz_oxide v0.5.1 [INFO] [stderr] Compiling libz-sys v1.1.5 [INFO] [stderr] Compiling flate2 v1.0.23 [INFO] [stderr] Compiling kseq v0.2.7 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 11.69s [INFO] running `Command { std: "docker" "inspect" "f5399792b91dbcf099a7169a6018eff68f96e7c3522e0b6e3ab207a8c1717a77", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f5399792b91dbcf099a7169a6018eff68f96e7c3522e0b6e3ab207a8c1717a77", kill_on_drop: false }` [INFO] [stdout] f5399792b91dbcf099a7169a6018eff68f96e7c3522e0b6e3ab207a8c1717a77 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-21/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-21/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7635578e2216d1d93a0e05afa9ac6a5cf240191e30170c246d85689424424ffc [INFO] running `Command { std: "docker" "start" "-a" "7635578e2216d1d93a0e05afa9ac6a5cf240191e30170c246d85689424424ffc", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling crossbeam-utils v0.8.8 [INFO] [stderr] Compiling semver v1.0.7 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling syn v1.0.91 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling plotters-backend v0.3.2 [INFO] [stderr] Compiling half v1.8.2 [INFO] [stderr] Compiling safemem v0.3.3 [INFO] [stderr] Compiling bytecount v0.6.2 [INFO] [stderr] Compiling memoffset v0.6.5 [INFO] [stderr] Compiling crossbeam-epoch v0.9.8 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling itertools v0.10.3 [INFO] [stderr] Compiling regex v1.5.5 [INFO] [stderr] Compiling clap v2.34.0 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling tinytemplate v1.2.1 [INFO] [stderr] Compiling plotters-svg v0.3.1 [INFO] [stderr] Compiling serde_cbor v0.11.2 [INFO] [stderr] Compiling buf_redux v0.8.4 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling crossbeam-channel v0.5.4 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling xz2 v0.1.6 [INFO] [stderr] Compiling rustc_version v0.4.0 [INFO] [stderr] Compiling cast v0.2.7 [INFO] [stderr] Compiling plotters v0.3.1 [INFO] [stderr] Compiling bzip2 v0.4.3 [INFO] [stderr] Compiling needletail v0.4.1 [INFO] [stderr] Compiling criterion-plot v0.4.4 [INFO] [stderr] Compiling serde_derive v1.0.136 [INFO] [stderr] Compiling criterion v0.3.5 [INFO] [stderr] Compiling kseq v0.2.7 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 44.75s [INFO] running `Command { std: "docker" "inspect" "7635578e2216d1d93a0e05afa9ac6a5cf240191e30170c246d85689424424ffc", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7635578e2216d1d93a0e05afa9ac6a5cf240191e30170c246d85689424424ffc", kill_on_drop: false }` [INFO] [stdout] 7635578e2216d1d93a0e05afa9ac6a5cf240191e30170c246d85689424424ffc [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-21/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-21/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] abd1e88e6af6d3f118bc9a1f8388311bd5a35e8e854506d3637799698002cc64 [INFO] running `Command { std: "docker" "start" "-a" "abd1e88e6af6d3f118bc9a1f8388311bd5a35e8e854506d3637799698002cc64", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.69s [INFO] [stdout] running 0 tests [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/kseq-f8aeca9ca7e32faf) [INFO] [stdout] [INFO] [stderr] Running tests/test.rs (/opt/rustwide/target/debug/deps/test-aa2149166062e628) [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stderr] Doc-tests kseq [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 13 tests [INFO] [stdout] test test_invalid_fasta ... ok [INFO] [stdout] test test_invalid_fasta_with_seq_len_is_0 ... ok [INFO] [stdout] test test_invalid_fastq_miss_sep ... ok [INFO] [stdout] test test_invalid_fastq_seq_has_diff_len_with_qual ... ok [INFO] [stdout] test test_invalid_fastq_with_seq_len_is_0 ... ok [INFO] [stdout] test test_normal_multi_line_fasta ... ok [INFO] [stdout] test test_normal_multi_line_fastq ... ok [INFO] [stdout] test test_normal_one_line_fasta ... ok [INFO] [stdout] test test_normal_one_line_fastq ... ok [INFO] [stdout] test test_truncate_fasta ... ok [INFO] [stdout] test test_truncate_fastq_miss_qual ... ok [INFO] [stdout] test test_truncate_fastq_miss_sep ... ok [INFO] [stdout] test test_truncate_fastq_miss_seq ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 13 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test src/lib.rs - (line 43) ... ignored [INFO] [stdout] test src/lib.rs - (line 27) - compile ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 1 ignored; 0 measured; 0 filtered out; finished in 0.07s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "abd1e88e6af6d3f118bc9a1f8388311bd5a35e8e854506d3637799698002cc64", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "abd1e88e6af6d3f118bc9a1f8388311bd5a35e8e854506d3637799698002cc64", kill_on_drop: false }` [INFO] [stdout] abd1e88e6af6d3f118bc9a1f8388311bd5a35e8e854506d3637799698002cc64