[INFO] fetching crate hts 0.1.18... [INFO] testing hts-0.1.18 against 1.60.0 for beta-1.61-1 [INFO] extracting crate hts 0.1.18 into /workspace/builds/worker-10/source [INFO] validating manifest of crates.io crate hts 0.1.18 on toolchain 1.60.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate hts 0.1.18 [INFO] finished tweaking crates.io crate hts 0.1.18 [INFO] tweaked toml for crates.io crate hts 0.1.18 written to /workspace/builds/worker-10/source/Cargo.toml [INFO] crate crates.io crate hts 0.1.18 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded clang-sys v1.2.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] c3760cf444221390f549f3d49cd6d66cfdc41a1a0beeb36cc1060e7a2b62b916 [INFO] running `Command { std: "docker" "start" "-a" "c3760cf444221390f549f3d49cd6d66cfdc41a1a0beeb36cc1060e7a2b62b916", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c3760cf444221390f549f3d49cd6d66cfdc41a1a0beeb36cc1060e7a2b62b916", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c3760cf444221390f549f3d49cd6d66cfdc41a1a0beeb36cc1060e7a2b62b916", kill_on_drop: false }` [INFO] [stdout] c3760cf444221390f549f3d49cd6d66cfdc41a1a0beeb36cc1060e7a2b62b916 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9ffdaa85b9e219ccab90be52c3943e0e59b4d0ddce0600b024916e41103052c1 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "9ffdaa85b9e219ccab90be52c3943e0e59b4d0ddce0600b024916e41103052c1", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.26 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling clang-sys v1.2.0 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Compiling regex v1.4.5 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Compiling hts v0.1.18 (/opt/rustwide/workdir) [INFO] [stderr] error: failed to run custom build command for `hts v0.1.18 (/opt/rustwide/workdir)` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hts-f8bb856c01cc9a13/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/hts-2c48f0a84f1a7672/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/hts-2c48f0a84f1a7672/out/htslib [INFO] [stderr] + git clone --recursive -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', build.rs:33:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x5591311ee9ed - std::backtrace_rs::backtrace::libunwind::trace::hee598835bc88d35b [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5 [INFO] [stderr] 1: 0x5591311ee9ed - std::backtrace_rs::backtrace::trace_unsynchronized::h9cdc730ba5cf5d72 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x5591311ee9ed - std::sys_common::backtrace::_print_fmt::h75aeaf7ed30e43fa [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/sys_common/backtrace.rs:66:5 [INFO] [stderr] 3: 0x5591311ee9ed - ::fmt::h606862f787600875 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/sys_common/backtrace.rs:45:22 [INFO] [stderr] 4: 0x55913121621c - core::fmt::write::he803f0f418caf762 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/core/src/fmt/mod.rs:1190:17 [INFO] [stderr] 5: 0x5591311ea298 - std::io::Write::write_fmt::h70bc45872f37e7bb [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/io/mod.rs:1657:15 [INFO] [stderr] 6: 0x5591311f0cc7 - std::sys_common::backtrace::_print::h64d038cf8ac3e13e [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/sys_common/backtrace.rs:48:5 [INFO] [stderr] 7: 0x5591311f0cc7 - std::sys_common::backtrace::print::h359300b4a7fccf65 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/sys_common/backtrace.rs:35:9 [INFO] [stderr] 8: 0x5591311f0cc7 - std::panicking::default_hook::{{closure}}::hf51be35e2f510149 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/panicking.rs:295:22 [INFO] [stderr] 9: 0x5591311f0990 - std::panicking::default_hook::h03ca0f22e1d2d25e [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/panicking.rs:314:9 [INFO] [stderr] 10: 0x5591311f1419 - std::panicking::rust_panic_with_hook::h3b7380e99b825b63 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/panicking.rs:698:17 [INFO] [stderr] 11: 0x5591311f10c9 - std::panicking::begin_panic_handler::{{closure}}::h8e849d0710154ce0 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/panicking.rs:586:13 [INFO] [stderr] 12: 0x5591311eeeb4 - std::sys_common::backtrace::__rust_end_short_backtrace::hedcdaddbd4c46cc5 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/sys_common/backtrace.rs:138:18 [INFO] [stderr] 13: 0x5591311f0e19 - rust_begin_unwind [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/panicking.rs:584:5 [INFO] [stderr] 14: 0x559130cdca43 - core::panicking::panic_fmt::he1bbc7336d49a357 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/core/src/panicking.rs:143:14 [INFO] [stderr] 15: 0x559130cdc90d - core::panicking::panic::h4241c5ccea17faca [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/core/src/panicking.rs:48:5 [INFO] [stderr] 16: 0x559130cddbab - build_script_build::build_own_htslib::h61386349963732b3 [INFO] [stderr] at /opt/rustwide/workdir/build.rs:33:5 [INFO] [stderr] 17: 0x559130cddfe4 - build_script_build::main::h3a65d8d402376859 [INFO] [stderr] at /opt/rustwide/workdir/build.rs:65:9 [INFO] [stderr] 18: 0x559130cdfa5b - core::ops::function::FnOnce::call_once::h72c7e1bea1bc5473 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 19: 0x559130ce1ede - std::sys_common::backtrace::__rust_begin_short_backtrace::h3d987fc8a2a6691d [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/sys_common/backtrace.rs:122:18 [INFO] [stderr] 20: 0x559130cdfe11 - std::rt::lang_start::{{closure}}::hd6c09b4668649e78 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/rt.rs:145:18 [INFO] [stderr] 21: 0x5591311ee0d1 - core::ops::function::impls:: for &F>::call_once::hb7014f43484a8b4e [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 22: 0x5591311ee0d1 - std::panicking::try::do_call::h7bc9dc436daeb8c7 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/panicking.rs:492:40 [INFO] [stderr] 23: 0x5591311ee0d1 - std::panicking::try::h653d68a27ff5f175 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/panicking.rs:456:19 [INFO] [stderr] 24: 0x5591311ee0d1 - std::panic::catch_unwind::h9d739f9f59895e68 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/panic.rs:137:14 [INFO] [stderr] 25: 0x5591311ee0d1 - std::rt::lang_start_internal::{{closure}}::hf006f2bc7ce22bbe [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/rt.rs:128:48 [INFO] [stderr] 26: 0x5591311ee0d1 - std::panicking::try::do_call::hfb39d6df61a2e69f [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/panicking.rs:492:40 [INFO] [stderr] 27: 0x5591311ee0d1 - std::panicking::try::h13e2d225134958ac [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/panicking.rs:456:19 [INFO] [stderr] 28: 0x5591311ee0d1 - std::panic::catch_unwind::h3bd49b5a5dfb1a50 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/panic.rs:137:14 [INFO] [stderr] 29: 0x5591311ee0d1 - std::rt::lang_start_internal::h2ba92edce36c035e [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/rt.rs:128:20 [INFO] [stderr] 30: 0x559130cdfde0 - std::rt::lang_start::h9791ecf73bf35ca8 [INFO] [stderr] at /rustc/7737e0b5c4103216d6fd8cf941b7ab9bdbaace7c/library/std/src/rt.rs:144:17 [INFO] [stderr] 31: 0x559130cde60c - main [INFO] [stderr] 32: 0x7ff06b7bd0b3 - __libc_start_main [INFO] [stderr] 33: 0x559130cdd2ce - _start [INFO] [stderr] 34: 0x0 - [INFO] running `Command { std: "docker" "inspect" "9ffdaa85b9e219ccab90be52c3943e0e59b4d0ddce0600b024916e41103052c1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9ffdaa85b9e219ccab90be52c3943e0e59b4d0ddce0600b024916e41103052c1", kill_on_drop: false }` [INFO] [stdout] 9ffdaa85b9e219ccab90be52c3943e0e59b4d0ddce0600b024916e41103052c1