[INFO] fetching crate gkl 0.1.1...
[INFO] testing gkl-0.1.1 against 1.60.0 for beta-1.61-1
[INFO] extracting crate gkl 0.1.1 into /workspace/builds/worker-6/source
[INFO] validating manifest of crates.io crate gkl 0.1.1 on toolchain 1.60.0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate gkl 0.1.1
[INFO] finished tweaking crates.io crate gkl 0.1.1
[INFO] tweaked toml for crates.io crate gkl 0.1.1 written to /workspace/builds/worker-6/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] e775bc46a92da3a8dc0d2150df40a4c5f6668ee4d1f3a65cca6f7b76f99dd74b
[INFO] running `Command { std: "docker" "start" "-a" "e775bc46a92da3a8dc0d2150df40a4c5f6668ee4d1f3a65cca6f7b76f99dd74b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e775bc46a92da3a8dc0d2150df40a4c5f6668ee4d1f3a65cca6f7b76f99dd74b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e775bc46a92da3a8dc0d2150df40a4c5f6668ee4d1f3a65cca6f7b76f99dd74b", kill_on_drop: false }`
[INFO] [stdout] e775bc46a92da3a8dc0d2150df40a4c5f6668ee4d1f3a65cca6f7b76f99dd74b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 4edbc20ec123b57312876a110758a66857556d54e0ad1ca3ddec619eca874881
[INFO] running `Command { std: "docker" "start" "-a" "4edbc20ec123b57312876a110758a66857556d54e0ad1ca3ddec619eca874881", kill_on_drop: false }`
[INFO] [stderr]    Compiling cc v1.0.73
[INFO] [stderr]    Compiling gkl v0.1.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 27.47s
[INFO] running `Command { std: "docker" "inspect" "4edbc20ec123b57312876a110758a66857556d54e0ad1ca3ddec619eca874881", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4edbc20ec123b57312876a110758a66857556d54e0ad1ca3ddec619eca874881", kill_on_drop: false }`
[INFO] [stdout] 4edbc20ec123b57312876a110758a66857556d54e0ad1ca3ddec619eca874881
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a09289803fc8361bdc1e10882c5babdee6af3a5d6b1bd6566f5048e989a799f6
[INFO] running `Command { std: "docker" "start" "-a" "a09289803fc8361bdc1e10882c5babdee6af3a5d6b1bd6566f5048e989a799f6", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling gkl v0.1.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 2.01s
[INFO] running `Command { std: "docker" "inspect" "a09289803fc8361bdc1e10882c5babdee6af3a5d6b1bd6566f5048e989a799f6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a09289803fc8361bdc1e10882c5babdee6af3a5d6b1bd6566f5048e989a799f6", kill_on_drop: false }`
[INFO] [stdout] a09289803fc8361bdc1e10882c5babdee6af3a5d6b1bd6566f5048e989a799f6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 7f561f23e267ff896ee6428e9183cce55a3d91465186d03a735cd1e4c9ecf3dd
[INFO] running `Command { std: "docker" "start" "-a" "7f561f23e267ff896ee6428e9183cce55a3d91465186d03a735cd1e4c9ecf3dd", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.14s
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/gkl-eb8a2f60f4b49360)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/pairhmm.rs (/opt/rustwide/target/debug/deps/pairhmm-8524c98dcccc448e)
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test simple ... ok
[INFO] [stdout] test data_file ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.16s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/smithwaterman.rs (/opt/rustwide/target/debug/deps/smithwaterman-2e37fa6b2264e47d)
[INFO] [stdout] 
[INFO] [stdout] running 9 tests
[INFO] [stdout] test indels_at_start_and_end ... ok
[INFO] [stdout] test single_element ... ok
[INFO] [stdout] test two_element ... ok
[INFO] [stdout] test read_aligned_to_ref_complex_alignment ... ok
[INFO] [stdout] test degenerate_alignment_with_indels_at_both_ends ... ok
[INFO] [stdout] test odd_no_alignment ... ok
[INFO] [stdout] test substring_match ... ok
[INFO] [stdout] test substring_match_long ... ok
[INFO] [stdout] test identical_alignments_with_differing_flank_lengths ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 9 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests gkl
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "7f561f23e267ff896ee6428e9183cce55a3d91465186d03a735cd1e4c9ecf3dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7f561f23e267ff896ee6428e9183cce55a3d91465186d03a735cd1e4c9ecf3dd", kill_on_drop: false }`
[INFO] [stdout] 7f561f23e267ff896ee6428e9183cce55a3d91465186d03a735cd1e4c9ecf3dd