[INFO] fetching crate bdb 0.0.1... [INFO] testing bdb-0.0.1 against 1.60.0 for beta-1.61-1 [INFO] extracting crate bdb 0.0.1 into /workspace/builds/worker-12/source [INFO] validating manifest of crates.io crate bdb 0.0.1 on toolchain 1.60.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate bdb 0.0.1 [INFO] finished tweaking crates.io crate bdb 0.0.1 [INFO] tweaked toml for crates.io crate bdb 0.0.1 written to /workspace/builds/worker-12/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded numpress v1.1.0 [INFO] [stderr] Downloaded digit_group v0.1.0 [INFO] [stderr] Downloaded ref_slice v1.2.1 [INFO] [stderr] Downloaded quick-xml v0.12.4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] c3a3504679252a5c6509ce38a0b3896cc635bdc75a5ed7159952d2f2ccc9e1f7 [INFO] running `Command { std: "docker" "start" "-a" "c3a3504679252a5c6509ce38a0b3896cc635bdc75a5ed7159952d2f2ccc9e1f7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c3a3504679252a5c6509ce38a0b3896cc635bdc75a5ed7159952d2f2ccc9e1f7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c3a3504679252a5c6509ce38a0b3896cc635bdc75a5ed7159952d2f2ccc9e1f7", kill_on_drop: false }` [INFO] [stdout] c3a3504679252a5c6509ce38a0b3896cc635bdc75a5ed7159952d2f2ccc9e1f7 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 778e128f4340983e2e7842036c08943a16afb4293b1fecb6f2952adeb74768ae [INFO] running `Command { std: "docker" "start" "-a" "778e128f4340983e2e7842036c08943a16afb4293b1fecb6f2952adeb74768ae", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.1.0 [INFO] [stderr] Compiling libc v0.2.123 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling futures v0.1.31 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling proc-macro2 v1.0.37 [INFO] [stderr] Compiling cc v1.0.73 [INFO] [stderr] Compiling semver-parser v0.7.0 [INFO] [stderr] Compiling log v0.4.16 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling maybe-uninit v2.0.0 [INFO] [stderr] Compiling byteorder v1.4.3 [INFO] [stderr] Compiling syn v1.0.91 [INFO] [stderr] Compiling memchr v2.4.1 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling rand_core v0.4.2 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling tinyvec_macros v0.1.0 [INFO] [stderr] Compiling matches v0.1.9 [INFO] [stderr] Compiling slab v0.4.6 [INFO] [stderr] Compiling fnv v1.0.7 [INFO] [stderr] Compiling serde_derive v1.0.136 [INFO] [stderr] Compiling unicode-bidi v0.3.7 [INFO] [stderr] Compiling pkg-config v0.3.25 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling adler v1.0.2 [INFO] [stderr] Compiling serde v1.0.136 [INFO] [stderr] Compiling version_check v0.9.4 [INFO] [stderr] Compiling gimli v0.26.1 [INFO] [stderr] Compiling failure_derive v0.1.8 [INFO] [stderr] Compiling percent-encoding v2.1.0 [INFO] [stderr] Compiling hashbrown v0.11.2 [INFO] [stderr] Compiling httparse v1.7.0 [INFO] [stderr] Compiling percent-encoding v1.0.1 [INFO] [stderr] Compiling openssl v0.10.38 [INFO] [stderr] Compiling rustc-demangle v0.1.21 [INFO] [stderr] Compiling foreign-types-shared v0.1.1 [INFO] [stderr] Compiling once_cell v1.10.0 [INFO] [stderr] Compiling try-lock v0.2.3 [INFO] [stderr] Compiling ryu v1.0.9 [INFO] [stderr] Compiling encoding_rs v0.8.31 [INFO] [stderr] Compiling crc32fast v1.3.2 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling serde_json v1.0.79 [INFO] [stderr] Compiling native-tls v0.2.10 [INFO] [stderr] Compiling openssl-probe v0.1.5 [INFO] [stderr] Compiling itoa v1.0.1 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling dtoa v0.4.8 [INFO] [stderr] Compiling mime v0.3.16 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling ref_slice v1.2.1 [INFO] [stderr] Compiling digit_group v0.1.0 [INFO] [stderr] Compiling numpress v1.1.0 [INFO] [stderr] Compiling try_from v0.3.2 [INFO] [stderr] Compiling semver v0.9.0 [INFO] [stderr] Compiling autocfg v0.1.8 [INFO] [stderr] Compiling lock_api v0.3.4 [INFO] [stderr] Compiling tinyvec v1.5.1 [INFO] [stderr] Compiling rand_core v0.3.1 [INFO] [stderr] Compiling rand_jitter v0.1.4 [INFO] [stderr] Compiling base64 v0.10.1 [INFO] [stderr] Compiling miniz_oxide v0.5.1 [INFO] [stderr] Compiling openssl-src v111.18.0+1.1.1n [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling memoffset v0.5.6 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling indexmap v1.8.1 [INFO] [stderr] Compiling form_urlencoded v1.0.1 [INFO] [stderr] Compiling foreign-types v0.3.2 [INFO] [stderr] Compiling unicase v2.6.0 [INFO] [stderr] Compiling tokio-sync v0.1.8 [INFO] [stderr] Compiling rand_pcg v0.1.2 [INFO] [stderr] Compiling rand_chacha v0.1.1 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Compiling rand_xorshift v0.1.1 [INFO] [stderr] Compiling rand_hc v0.1.0 [INFO] [stderr] Compiling rand_isaac v0.1.1 [INFO] [stderr] Compiling rustc_version v0.2.3 [INFO] [stderr] Compiling openssl-sys v0.9.72 [INFO] [stderr] Compiling backtrace v0.3.64 [INFO] [stderr] Compiling want v0.2.0 [INFO] [stderr] Compiling smallvec v0.6.14 [INFO] [stderr] Compiling unicode-normalization v0.1.19 [INFO] [stderr] Compiling parking_lot_core v0.6.2 [INFO] [stderr] Compiling parking_lot v0.9.0 [INFO] [stderr] Compiling hyper v0.12.36 [INFO] [stderr] Compiling object v0.27.1 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling quote v1.0.18 [INFO] [stderr] Compiling iovec v0.1.4 [INFO] [stderr] Compiling num_cpus v1.13.1 [INFO] [stderr] Compiling net2 v0.2.37 [INFO] [stderr] Compiling time v0.1.44 [INFO] [stderr] Compiling rand_os v0.1.3 [INFO] [stderr] Compiling flate2 v1.0.23 [INFO] [stderr] Compiling bytes v0.4.12 [INFO] [stderr] Compiling futures-cpupool v0.1.8 [INFO] [stderr] Compiling addr2line v0.17.0 [INFO] [stderr] Compiling mio v0.6.23 [INFO] [stderr] Compiling tokio-executor v0.1.10 [INFO] [stderr] Compiling crossbeam-queue v0.2.3 [INFO] [stderr] Compiling idna v0.1.5 [INFO] [stderr] Compiling idna v0.2.3 [INFO] [stderr] Compiling mime_guess v2.0.4 [INFO] [stderr] Compiling tokio-io v0.1.13 [INFO] [stderr] Compiling http v0.1.21 [INFO] [stderr] Compiling string v0.2.1 [INFO] [stderr] Compiling tokio-buf v0.1.1 [INFO] [stderr] Compiling regex v1.5.5 [INFO] [stderr] Compiling tokio-timer v0.2.13 [INFO] [stderr] Compiling tokio-current-thread v0.1.7 [INFO] [stderr] Compiling crossbeam-deque v0.7.4 [INFO] [stderr] Compiling url v2.2.2 [INFO] [stderr] Compiling url v1.7.2 [INFO] [stderr] Compiling uuid v0.7.4 [INFO] [stderr] Compiling tokio-threadpool v0.1.18 [INFO] [stderr] Compiling tokio-reactor v0.1.12 [INFO] [stderr] Compiling cookie v0.12.0 [INFO] [stderr] Compiling tokio-tcp v0.1.4 [INFO] [stderr] Compiling publicsuffix v1.5.6 [INFO] [stderr] Compiling tokio v0.1.22 [INFO] [stderr] Compiling synstructure v0.12.6 [INFO] [stderr] Compiling h2 v0.1.26 [INFO] [stderr] Compiling http-body v0.1.0 [INFO] [stderr] Compiling failure v0.1.8 [INFO] [stderr] Compiling quick-xml v0.12.4 [INFO] [stderr] Compiling serde_urlencoded v0.5.5 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling cookie_store v0.7.0 [INFO] [stderr] Compiling hyper-tls v0.3.2 [INFO] [stderr] Compiling reqwest v0.9.24 [INFO] [stderr] Compiling bdb v0.0.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/mass_spectra/complete.rs:11:9 [INFO] [stdout] | [INFO] [stdout] 11 | / ( [INFO] [stdout] 12 | | self.is_valid() && [INFO] [stdout] | |____________^ [INFO] [stdout] 13 | self.ms_level != 0 && [INFO] [stdout] 14 | !self.filter.is_empty() [INFO] [stdout] | ____________________________________^ [INFO] [stdout] 15 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_parens)]` on by default [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 11 ~ self.is_valid() && [INFO] [stdout] 12 | self.ms_level != 0 && [INFO] [stdout] 13 ~ !self.filter.is_empty() [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/mass_spectra/valid.rs:9:9 [INFO] [stdout] | [INFO] [stdout] 9 | / ( [INFO] [stdout] 10 | | self.num != 0 && [INFO] [stdout] | |____________^ [INFO] [stdout] ... [INFO] [stdout] 30 | ) [INFO] [stdout] | ______________^ [INFO] [stdout] 31 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 9 ~ self.num != 0 && [INFO] [stdout] 10 | self.rt >= 0.0 && [INFO] [stdout] 11 | !self.peaks.is_empty() && [INFO] [stdout] 12 | // If the MS level is 2 or higher, check the parents are set. [INFO] [stdout] 13 | ( [INFO] [stdout] 14 | ( [INFO] [stdout] ... [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:205:16 [INFO] [stdout] | [INFO] [stdout] 205 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(semicolon_in_expressions_from_macros)]` on by default [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:206:20 [INFO] [stdout] | [INFO] [stdout] 206 | let captures = none_to_error!(Scan::extract().captures(&line), InvalidInput); [INFO] [stdout] | ------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:222:16 [INFO] [stdout] | [INFO] [stdout] 222 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:223:20 [INFO] [stdout] | [INFO] [stdout] 223 | let captures = none_to_error!(Rt::extract().captures(&line), InvalidInput); [INFO] [stdout] | ----------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:237:16 [INFO] [stdout] | [INFO] [stdout] 237 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:249:16 [INFO] [stdout] | [INFO] [stdout] 249 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:261:16 [INFO] [stdout] | [INFO] [stdout] 261 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:273:16 [INFO] [stdout] | [INFO] [stdout] 273 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:292:18 [INFO] [stdout] | [INFO] [stdout] 292 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:293:25 [INFO] [stdout] | [INFO] [stdout] 293 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:226:16 [INFO] [stdout] | [INFO] [stdout] 226 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:240:16 [INFO] [stdout] | [INFO] [stdout] 240 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:241:20 [INFO] [stdout] | [INFO] [stdout] 241 | let captures = none_to_error!(Title::extract().captures(&line), InvalidInput); [INFO] [stdout] | -------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:258:16 [INFO] [stdout] | [INFO] [stdout] 258 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:259:20 [INFO] [stdout] | [INFO] [stdout] 259 | let captures = none_to_error!(Rt::extract().captures(&line), InvalidInput); [INFO] [stdout] | ----------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:275:16 [INFO] [stdout] | [INFO] [stdout] 275 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:276:20 [INFO] [stdout] | [INFO] [stdout] 276 | let captures = none_to_error!(PepMass::extract().captures(&line), InvalidInput); [INFO] [stdout] | ---------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:298:27 [INFO] [stdout] | [INFO] [stdout] 298 | let peeked_line = none_to_error!(lines.peek(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:318:24 [INFO] [stdout] | [INFO] [stdout] 318 | let captures = none_to_error!(Charge::extract().captures(&line), InvalidInput); [INFO] [stdout] | --------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:348:18 [INFO] [stdout] | [INFO] [stdout] 348 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:349:25 [INFO] [stdout] | [INFO] [stdout] 349 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:206:16 [INFO] [stdout] | [INFO] [stdout] 206 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:220:16 [INFO] [stdout] | [INFO] [stdout] 220 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:221:20 [INFO] [stdout] | [INFO] [stdout] 221 | let captures = none_to_error!(Title::extract().captures(&line), InvalidInput); [INFO] [stdout] | -------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:241:16 [INFO] [stdout] | [INFO] [stdout] 241 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:242:20 [INFO] [stdout] | [INFO] [stdout] 242 | let captures = none_to_error!(PepMass::extract().captures(&line), InvalidInput); [INFO] [stdout] | ---------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:261:16 [INFO] [stdout] | [INFO] [stdout] 261 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:262:20 [INFO] [stdout] | [INFO] [stdout] 262 | let captures = none_to_error!(Charge::extract().captures(&line), InvalidInput); [INFO] [stdout] | --------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:288:18 [INFO] [stdout] | [INFO] [stdout] 288 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:289:25 [INFO] [stdout] | [INFO] [stdout] 289 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:230:16 [INFO] [stdout] | [INFO] [stdout] 230 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:244:16 [INFO] [stdout] | [INFO] [stdout] 244 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:245:20 [INFO] [stdout] | [INFO] [stdout] 245 | let captures = none_to_error!(Title::extract().captures(&line), InvalidInput); [INFO] [stdout] | -------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:262:16 [INFO] [stdout] | [INFO] [stdout] 262 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:263:20 [INFO] [stdout] | [INFO] [stdout] 263 | let captures = none_to_error!(PepMass::extract().captures(&line), InvalidInput); [INFO] [stdout] | ---------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:283:20 [INFO] [stdout] | [INFO] [stdout] 283 | let captures = none_to_error!(Charge::extract().captures(&line), InvalidInput); [INFO] [stdout] | --------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:304:20 [INFO] [stdout] | [INFO] [stdout] 304 | let captures = none_to_error!(Rt::extract().captures(&line), InvalidInput); [INFO] [stdout] | ----------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:317:16 [INFO] [stdout] | [INFO] [stdout] 317 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:320:20 [INFO] [stdout] | [INFO] [stdout] 320 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:334:16 [INFO] [stdout] | [INFO] [stdout] 334 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:353:18 [INFO] [stdout] | [INFO] [stdout] 353 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:354:25 [INFO] [stdout] | [INFO] [stdout] 354 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/sra/complete.rs:11:9 [INFO] [stdout] | [INFO] [stdout] 11 | / ( [INFO] [stdout] 12 | | self.is_valid() && [INFO] [stdout] | |____________^ [INFO] [stdout] 13 | !self.description.is_empty() [INFO] [stdout] | _________________________________________^ [INFO] [stdout] 14 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 11 ~ self.is_valid() && [INFO] [stdout] 12 ~ !self.description.is_empty() [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/sra/valid.rs:10:9 [INFO] [stdout] | [INFO] [stdout] 10 | / ( [INFO] [stdout] 11 | | !self.seq_id.is_empty() && [INFO] [stdout] | |____________^ [INFO] [stdout] ... [INFO] [stdout] 15 | SequenceQualityRegex::validate().is_match(&self.quality) [INFO] [stdout] | _____________________________________________________________________^ [INFO] [stdout] 16 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 10 ~ !self.seq_id.is_empty() && [INFO] [stdout] 11 | self.length as usize == self.sequence.len() && [INFO] [stdout] 12 | self.length as usize == self.quality.len() && [INFO] [stdout] 13 | NucleotideRegex::validate().is_match(&self.sequence) && [INFO] [stdout] 14 ~ SequenceQualityRegex::validate().is_match(&self.quality) [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:195:18 [INFO] [stdout] | [INFO] [stdout] 195 | let header = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:198:20 [INFO] [stdout] | [INFO] [stdout] 198 | let captures = none_to_error!(FastqHeaderRegex::extract().captures(&header), InvalidInput); [INFO] [stdout] | --------------------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:210:20 [INFO] [stdout] | [INFO] [stdout] 210 | let sequence = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:215:18 [INFO] [stdout] | [INFO] [stdout] 215 | let header = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:219:19 [INFO] [stdout] | [INFO] [stdout] 219 | let quality = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/uniprot/complete.rs:11:9 [INFO] [stdout] | [INFO] [stdout] 11 | / ( [INFO] [stdout] 12 | | self.is_valid() && [INFO] [stdout] | |____________^ [INFO] [stdout] 13 | !self.proteome.is_empty() && [INFO] [stdout] 14 | !self.taxonomy.is_empty() [INFO] [stdout] | ______________________________________^ [INFO] [stdout] 15 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 11 ~ self.is_valid() && [INFO] [stdout] 12 | !self.proteome.is_empty() && [INFO] [stdout] 13 ~ !self.taxonomy.is_empty() [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/uniprot/valid.rs:11:9 [INFO] [stdout] | [INFO] [stdout] 11 | / ( [INFO] [stdout] 12 | | // Do not try to validate the Organism [INFO] [stdout] 13 | | // With virus names being non-standard, it is impossible [INFO] [stdout] 14 | | // with an NFA, and extremely time complex otherwise. [INFO] [stdout] 15 | | self.sequence_version > 0 && [INFO] [stdout] | |____________^ [INFO] [stdout] ... [INFO] [stdout] 33 | ) [INFO] [stdout] | ______________^ [INFO] [stdout] 34 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 11 ~ self.sequence_version > 0 && [INFO] [stdout] 12 | self.protein_evidence < ProteinEvidence::Unknown && [INFO] [stdout] 13 | self.mass > 0 && [INFO] [stdout] 14 | self.length as usize == self.sequence.len() && [INFO] [stdout] 15 | !self.sequence.is_empty() && [INFO] [stdout] 16 | !self.name.is_empty() && [INFO] [stdout] ... [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/csv.rs:145:15 [INFO] [stdout] | [INFO] [stdout] 145 | let row = none_to_error!(opt, InvalidInput)?; [INFO] [stdout] | --------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/csv.rs:384:8 [INFO] [stdout] | [INFO] [stdout] 384 | Ok(none_to_error!(iterator_from_csv(reader, delimiter).next(), InvalidInput)?) [INFO] [stdout] | ------------------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/fasta.rs:267:20 [INFO] [stdout] | [INFO] [stdout] 267 | let captures = none_to_error!(R::extract().captures(&header), InvalidInput); [INFO] [stdout] | ------------------------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/fasta.rs:298:20 [INFO] [stdout] | [INFO] [stdout] 298 | let captures = none_to_error!(R::extract().captures(&header), InvalidInput); [INFO] [stdout] | ------------------------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/fasta.rs:332:18 [INFO] [stdout] | [INFO] [stdout] 332 | let header = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/xml.rs:51:5 [INFO] [stdout] | [INFO] [stdout] 51 | none_to_error!(iterator_from_xml(reader).next(), UnexpectedEof) [INFO] [stdout] | --------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: macro invocations at the end of a block are treated as expressions [INFO] [stdout] = note: to ignore the value produced by the macro, add a semicolon after the invocation of `none_to_error` [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead. [INFO] [stdout] --> src/util/writer.rs:1:16 [INFO] [stdout] | [INFO] [stdout] 1 | use ref_slice::ref_slice; [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead. [INFO] [stdout] --> src/util/writer.rs:34:35 [INFO] [stdout] | [INFO] [stdout] 34 | self.writer.write_all(ref_slice(&self.delimiter))?; [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/util/alias.rs:9:26 [INFO] [stdout] | [INFO] [stdout] 9 | pub type ErrorType = Box; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: use `dyn` [INFO] [stdout] | [INFO] [stdout] 9 - pub type ErrorType = Box; [INFO] [stdout] 9 + pub type ErrorType = Box; [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/util/error.rs:168:32 [INFO] [stdout] | [INFO] [stdout] 168 | fn cause(&self) -> Option<&StdError> { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: use `dyn` [INFO] [stdout] | [INFO] [stdout] 168 - fn cause(&self) -> Option<&StdError> { [INFO] [stdout] 168 + fn cause(&self) -> Option<&dyn StdError> { [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:112:45 [INFO] [stdout] | [INFO] [stdout] 112 | write!(f, "UniProt error: {}", self.description()) [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:144:43 [INFO] [stdout] | [INFO] [stdout] 144 | ErrorKind::Io(ref err) => err.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:145:45 [INFO] [stdout] | [INFO] [stdout] 145 | ErrorKind::Utf8(ref err) => err.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:146:49 [INFO] [stdout] | [INFO] [stdout] 146 | ErrorKind::FromUtf8(ref err) => err.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:147:49 [INFO] [stdout] | [INFO] [stdout] 147 | ErrorKind::ParseInt(ref err) => err.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:151:42 [INFO] [stdout] | [INFO] [stdout] 151 | XmlError::Io(ref e) => e.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:152:44 [INFO] [stdout] | [INFO] [stdout] 152 | XmlError::Utf8(ref e) => e.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 70 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3m 38s [INFO] running `Command { std: "docker" "inspect" "778e128f4340983e2e7842036c08943a16afb4293b1fecb6f2952adeb74768ae", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "778e128f4340983e2e7842036c08943a16afb4293b1fecb6f2952adeb74768ae", kill_on_drop: false }` [INFO] [stdout] 778e128f4340983e2e7842036c08943a16afb4293b1fecb6f2952adeb74768ae [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] ab29522571b8b320b2678ca3580f2df1d6c1f45f858619135bac44f0f787cf6d [INFO] running `Command { std: "docker" "start" "-a" "ab29522571b8b320b2678ca3580f2df1d6c1f45f858619135bac44f0f787cf6d", kill_on_drop: false }` [INFO] [stderr] Compiling assert_approx_eq v1.1.0 [INFO] [stderr] Compiling bencher v0.1.5 [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/mass_spectra/complete.rs:11:9 [INFO] [stdout] | [INFO] [stdout] 11 | / ( [INFO] [stdout] 12 | | self.is_valid() && [INFO] [stdout] | |____________^ [INFO] [stdout] 13 | self.ms_level != 0 && [INFO] [stdout] 14 | !self.filter.is_empty() [INFO] [stdout] | ____________________________________^ [INFO] [stdout] 15 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_parens)]` on by default [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 11 ~ self.is_valid() && [INFO] [stdout] 12 | self.ms_level != 0 && [INFO] [stdout] 13 ~ !self.filter.is_empty() [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/mass_spectra/valid.rs:9:9 [INFO] [stdout] | [INFO] [stdout] 9 | / ( [INFO] [stdout] 10 | | self.num != 0 && [INFO] [stdout] | |____________^ [INFO] [stdout] ... [INFO] [stdout] 30 | ) [INFO] [stdout] | ______________^ [INFO] [stdout] 31 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 9 ~ self.num != 0 && [INFO] [stdout] 10 | self.rt >= 0.0 && [INFO] [stdout] 11 | !self.peaks.is_empty() && [INFO] [stdout] 12 | // If the MS level is 2 or higher, check the parents are set. [INFO] [stdout] 13 | ( [INFO] [stdout] 14 | ( [INFO] [stdout] ... [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:205:16 [INFO] [stdout] | [INFO] [stdout] 205 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(semicolon_in_expressions_from_macros)]` on by default [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:206:20 [INFO] [stdout] | [INFO] [stdout] 206 | let captures = none_to_error!(Scan::extract().captures(&line), InvalidInput); [INFO] [stdout] | ------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:222:16 [INFO] [stdout] | [INFO] [stdout] 222 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:223:20 [INFO] [stdout] | [INFO] [stdout] 223 | let captures = none_to_error!(Rt::extract().captures(&line), InvalidInput); [INFO] [stdout] | ----------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:237:16 [INFO] [stdout] | [INFO] [stdout] 237 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:249:16 [INFO] [stdout] | [INFO] [stdout] 249 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:261:16 [INFO] [stdout] | [INFO] [stdout] 261 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:273:16 [INFO] [stdout] | [INFO] [stdout] 273 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:292:18 [INFO] [stdout] | [INFO] [stdout] 292 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:293:25 [INFO] [stdout] | [INFO] [stdout] 293 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:226:16 [INFO] [stdout] | [INFO] [stdout] 226 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:240:16 [INFO] [stdout] | [INFO] [stdout] 240 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:241:20 [INFO] [stdout] | [INFO] [stdout] 241 | let captures = none_to_error!(Title::extract().captures(&line), InvalidInput); [INFO] [stdout] | -------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:258:16 [INFO] [stdout] | [INFO] [stdout] 258 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:259:20 [INFO] [stdout] | [INFO] [stdout] 259 | let captures = none_to_error!(Rt::extract().captures(&line), InvalidInput); [INFO] [stdout] | ----------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:275:16 [INFO] [stdout] | [INFO] [stdout] 275 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:276:20 [INFO] [stdout] | [INFO] [stdout] 276 | let captures = none_to_error!(PepMass::extract().captures(&line), InvalidInput); [INFO] [stdout] | ---------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:298:27 [INFO] [stdout] | [INFO] [stdout] 298 | let peeked_line = none_to_error!(lines.peek(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:318:24 [INFO] [stdout] | [INFO] [stdout] 318 | let captures = none_to_error!(Charge::extract().captures(&line), InvalidInput); [INFO] [stdout] | --------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:348:18 [INFO] [stdout] | [INFO] [stdout] 348 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:349:25 [INFO] [stdout] | [INFO] [stdout] 349 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:206:16 [INFO] [stdout] | [INFO] [stdout] 206 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:220:16 [INFO] [stdout] | [INFO] [stdout] 220 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:221:20 [INFO] [stdout] | [INFO] [stdout] 221 | let captures = none_to_error!(Title::extract().captures(&line), InvalidInput); [INFO] [stdout] | -------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:241:16 [INFO] [stdout] | [INFO] [stdout] 241 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:242:20 [INFO] [stdout] | [INFO] [stdout] 242 | let captures = none_to_error!(PepMass::extract().captures(&line), InvalidInput); [INFO] [stdout] | ---------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:261:16 [INFO] [stdout] | [INFO] [stdout] 261 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:262:20 [INFO] [stdout] | [INFO] [stdout] 262 | let captures = none_to_error!(Charge::extract().captures(&line), InvalidInput); [INFO] [stdout] | --------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:288:18 [INFO] [stdout] | [INFO] [stdout] 288 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:289:25 [INFO] [stdout] | [INFO] [stdout] 289 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:230:16 [INFO] [stdout] | [INFO] [stdout] 230 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:244:16 [INFO] [stdout] | [INFO] [stdout] 244 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:245:20 [INFO] [stdout] | [INFO] [stdout] 245 | let captures = none_to_error!(Title::extract().captures(&line), InvalidInput); [INFO] [stdout] | -------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:262:16 [INFO] [stdout] | [INFO] [stdout] 262 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:263:20 [INFO] [stdout] | [INFO] [stdout] 263 | let captures = none_to_error!(PepMass::extract().captures(&line), InvalidInput); [INFO] [stdout] | ---------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:283:20 [INFO] [stdout] | [INFO] [stdout] 283 | let captures = none_to_error!(Charge::extract().captures(&line), InvalidInput); [INFO] [stdout] | --------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:304:20 [INFO] [stdout] | [INFO] [stdout] 304 | let captures = none_to_error!(Rt::extract().captures(&line), InvalidInput); [INFO] [stdout] | ----------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:317:16 [INFO] [stdout] | [INFO] [stdout] 317 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:320:20 [INFO] [stdout] | [INFO] [stdout] 320 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:334:16 [INFO] [stdout] | [INFO] [stdout] 334 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:353:18 [INFO] [stdout] | [INFO] [stdout] 353 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:354:25 [INFO] [stdout] | [INFO] [stdout] 354 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/sra/complete.rs:11:9 [INFO] [stdout] | [INFO] [stdout] 11 | / ( [INFO] [stdout] 12 | | self.is_valid() && [INFO] [stdout] | |____________^ [INFO] [stdout] 13 | !self.description.is_empty() [INFO] [stdout] | _________________________________________^ [INFO] [stdout] 14 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 11 ~ self.is_valid() && [INFO] [stdout] 12 ~ !self.description.is_empty() [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/sra/valid.rs:10:9 [INFO] [stdout] | [INFO] [stdout] 10 | / ( [INFO] [stdout] 11 | | !self.seq_id.is_empty() && [INFO] [stdout] | |____________^ [INFO] [stdout] ... [INFO] [stdout] 15 | SequenceQualityRegex::validate().is_match(&self.quality) [INFO] [stdout] | _____________________________________________________________________^ [INFO] [stdout] 16 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 10 ~ !self.seq_id.is_empty() && [INFO] [stdout] 11 | self.length as usize == self.sequence.len() && [INFO] [stdout] 12 | self.length as usize == self.quality.len() && [INFO] [stdout] 13 | NucleotideRegex::validate().is_match(&self.sequence) && [INFO] [stdout] 14 ~ SequenceQualityRegex::validate().is_match(&self.quality) [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:195:18 [INFO] [stdout] | [INFO] [stdout] 195 | let header = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:198:20 [INFO] [stdout] | [INFO] [stdout] 198 | let captures = none_to_error!(FastqHeaderRegex::extract().captures(&header), InvalidInput); [INFO] [stdout] | --------------------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:210:20 [INFO] [stdout] | [INFO] [stdout] 210 | let sequence = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:215:18 [INFO] [stdout] | [INFO] [stdout] 215 | let header = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:219:19 [INFO] [stdout] | [INFO] [stdout] 219 | let quality = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/uniprot/complete.rs:11:9 [INFO] [stdout] | [INFO] [stdout] 11 | / ( [INFO] [stdout] 12 | | self.is_valid() && [INFO] [stdout] | |____________^ [INFO] [stdout] 13 | !self.proteome.is_empty() && [INFO] [stdout] 14 | !self.taxonomy.is_empty() [INFO] [stdout] | ______________________________________^ [INFO] [stdout] 15 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 11 ~ self.is_valid() && [INFO] [stdout] 12 | !self.proteome.is_empty() && [INFO] [stdout] 13 ~ !self.taxonomy.is_empty() [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/uniprot/valid.rs:11:9 [INFO] [stdout] | [INFO] [stdout] 11 | / ( [INFO] [stdout] 12 | | // Do not try to validate the Organism [INFO] [stdout] 13 | | // With virus names being non-standard, it is impossible [INFO] [stdout] 14 | | // with an NFA, and extremely time complex otherwise. [INFO] [stdout] 15 | | self.sequence_version > 0 && [INFO] [stdout] | |____________^ [INFO] [stdout] ... [INFO] [stdout] 33 | ) [INFO] [stdout] | ______________^ [INFO] [stdout] 34 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 11 ~ self.sequence_version > 0 && [INFO] [stdout] 12 | self.protein_evidence < ProteinEvidence::Unknown && [INFO] [stdout] 13 | self.mass > 0 && [INFO] [stdout] 14 | self.length as usize == self.sequence.len() && [INFO] [stdout] 15 | !self.sequence.is_empty() && [INFO] [stdout] 16 | !self.name.is_empty() && [INFO] [stdout] ... [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/csv.rs:145:15 [INFO] [stdout] | [INFO] [stdout] 145 | let row = none_to_error!(opt, InvalidInput)?; [INFO] [stdout] | --------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/csv.rs:384:8 [INFO] [stdout] | [INFO] [stdout] 384 | Ok(none_to_error!(iterator_from_csv(reader, delimiter).next(), InvalidInput)?) [INFO] [stdout] | ------------------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/fasta.rs:267:20 [INFO] [stdout] | [INFO] [stdout] 267 | let captures = none_to_error!(R::extract().captures(&header), InvalidInput); [INFO] [stdout] | ------------------------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/fasta.rs:298:20 [INFO] [stdout] | [INFO] [stdout] 298 | let captures = none_to_error!(R::extract().captures(&header), InvalidInput); [INFO] [stdout] | ------------------------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/fasta.rs:332:18 [INFO] [stdout] | [INFO] [stdout] 332 | let header = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/xml.rs:51:5 [INFO] [stdout] | [INFO] [stdout] 51 | none_to_error!(iterator_from_xml(reader).next(), UnexpectedEof) [INFO] [stdout] | --------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: macro invocations at the end of a block are treated as expressions [INFO] [stdout] = note: to ignore the value produced by the macro, add a semicolon after the invocation of `none_to_error` [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead. [INFO] [stdout] --> src/util/writer.rs:1:16 [INFO] [stdout] | [INFO] [stdout] 1 | use ref_slice::ref_slice; [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead. [INFO] [stdout] --> src/util/writer.rs:34:35 [INFO] [stdout] | [INFO] [stdout] 34 | self.writer.write_all(ref_slice(&self.delimiter))?; [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/util/alias.rs:9:26 [INFO] [stdout] | [INFO] [stdout] 9 | pub type ErrorType = Box; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: use `dyn` [INFO] [stdout] | [INFO] [stdout] 9 - pub type ErrorType = Box; [INFO] [stdout] 9 + pub type ErrorType = Box; [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/util/error.rs:168:32 [INFO] [stdout] | [INFO] [stdout] 168 | fn cause(&self) -> Option<&StdError> { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: use `dyn` [INFO] [stdout] | [INFO] [stdout] 168 - fn cause(&self) -> Option<&StdError> { [INFO] [stdout] 168 + fn cause(&self) -> Option<&dyn StdError> { [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:112:45 [INFO] [stdout] | [INFO] [stdout] 112 | write!(f, "UniProt error: {}", self.description()) [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:144:43 [INFO] [stdout] | [INFO] [stdout] 144 | ErrorKind::Io(ref err) => err.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:145:45 [INFO] [stdout] | [INFO] [stdout] 145 | ErrorKind::Utf8(ref err) => err.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:146:49 [INFO] [stdout] | [INFO] [stdout] 146 | ErrorKind::FromUtf8(ref err) => err.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:147:49 [INFO] [stdout] | [INFO] [stdout] 147 | ErrorKind::ParseInt(ref err) => err.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:151:42 [INFO] [stdout] | [INFO] [stdout] 151 | XmlError::Io(ref e) => e.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:152:44 [INFO] [stdout] | [INFO] [stdout] 152 | XmlError::Utf8(ref e) => e.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 70 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling bdb v0.0.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/mass_spectra/complete.rs:11:9 [INFO] [stdout] | [INFO] [stdout] 11 | / ( [INFO] [stdout] 12 | | self.is_valid() && [INFO] [stdout] | |____________^ [INFO] [stdout] 13 | self.ms_level != 0 && [INFO] [stdout] 14 | !self.filter.is_empty() [INFO] [stdout] | ____________________________________^ [INFO] [stdout] 15 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_parens)]` on by default [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 11 ~ self.is_valid() && [INFO] [stdout] 12 | self.ms_level != 0 && [INFO] [stdout] 13 ~ !self.filter.is_empty() [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/mass_spectra/valid.rs:9:9 [INFO] [stdout] | [INFO] [stdout] 9 | / ( [INFO] [stdout] 10 | | self.num != 0 && [INFO] [stdout] | |____________^ [INFO] [stdout] ... [INFO] [stdout] 30 | ) [INFO] [stdout] | ______________^ [INFO] [stdout] 31 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 9 ~ self.num != 0 && [INFO] [stdout] 10 | self.rt >= 0.0 && [INFO] [stdout] 11 | !self.peaks.is_empty() && [INFO] [stdout] 12 | // If the MS level is 2 or higher, check the parents are set. [INFO] [stdout] 13 | ( [INFO] [stdout] 14 | ( [INFO] [stdout] ... [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:205:16 [INFO] [stdout] | [INFO] [stdout] 205 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(semicolon_in_expressions_from_macros)]` on by default [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:206:20 [INFO] [stdout] | [INFO] [stdout] 206 | let captures = none_to_error!(Scan::extract().captures(&line), InvalidInput); [INFO] [stdout] | ------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:222:16 [INFO] [stdout] | [INFO] [stdout] 222 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:223:20 [INFO] [stdout] | [INFO] [stdout] 223 | let captures = none_to_error!(Rt::extract().captures(&line), InvalidInput); [INFO] [stdout] | ----------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:237:16 [INFO] [stdout] | [INFO] [stdout] 237 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:249:16 [INFO] [stdout] | [INFO] [stdout] 249 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:261:16 [INFO] [stdout] | [INFO] [stdout] 261 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:273:16 [INFO] [stdout] | [INFO] [stdout] 273 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:292:18 [INFO] [stdout] | [INFO] [stdout] 292 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/fullms_mgf.rs:293:25 [INFO] [stdout] | [INFO] [stdout] 293 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:226:16 [INFO] [stdout] | [INFO] [stdout] 226 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:240:16 [INFO] [stdout] | [INFO] [stdout] 240 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:241:20 [INFO] [stdout] | [INFO] [stdout] 241 | let captures = none_to_error!(Title::extract().captures(&line), InvalidInput); [INFO] [stdout] | -------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:258:16 [INFO] [stdout] | [INFO] [stdout] 258 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:259:20 [INFO] [stdout] | [INFO] [stdout] 259 | let captures = none_to_error!(Rt::extract().captures(&line), InvalidInput); [INFO] [stdout] | ----------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:275:16 [INFO] [stdout] | [INFO] [stdout] 275 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:276:20 [INFO] [stdout] | [INFO] [stdout] 276 | let captures = none_to_error!(PepMass::extract().captures(&line), InvalidInput); [INFO] [stdout] | ---------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:298:27 [INFO] [stdout] | [INFO] [stdout] 298 | let peeked_line = none_to_error!(lines.peek(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:318:24 [INFO] [stdout] | [INFO] [stdout] 318 | let captures = none_to_error!(Charge::extract().captures(&line), InvalidInput); [INFO] [stdout] | --------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:348:18 [INFO] [stdout] | [INFO] [stdout] 348 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/msconvert_mgf.rs:349:25 [INFO] [stdout] | [INFO] [stdout] 349 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:206:16 [INFO] [stdout] | [INFO] [stdout] 206 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:220:16 [INFO] [stdout] | [INFO] [stdout] 220 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:221:20 [INFO] [stdout] | [INFO] [stdout] 221 | let captures = none_to_error!(Title::extract().captures(&line), InvalidInput); [INFO] [stdout] | -------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:241:16 [INFO] [stdout] | [INFO] [stdout] 241 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:242:20 [INFO] [stdout] | [INFO] [stdout] 242 | let captures = none_to_error!(PepMass::extract().captures(&line), InvalidInput); [INFO] [stdout] | ---------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:261:16 [INFO] [stdout] | [INFO] [stdout] 261 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:262:20 [INFO] [stdout] | [INFO] [stdout] 262 | let captures = none_to_error!(Charge::extract().captures(&line), InvalidInput); [INFO] [stdout] | --------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:288:18 [INFO] [stdout] | [INFO] [stdout] 288 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pava_mgf.rs:289:25 [INFO] [stdout] | [INFO] [stdout] 289 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:230:16 [INFO] [stdout] | [INFO] [stdout] 230 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:244:16 [INFO] [stdout] | [INFO] [stdout] 244 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:245:20 [INFO] [stdout] | [INFO] [stdout] 245 | let captures = none_to_error!(Title::extract().captures(&line), InvalidInput); [INFO] [stdout] | -------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:262:16 [INFO] [stdout] | [INFO] [stdout] 262 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:263:20 [INFO] [stdout] | [INFO] [stdout] 263 | let captures = none_to_error!(PepMass::extract().captures(&line), InvalidInput); [INFO] [stdout] | ---------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:283:20 [INFO] [stdout] | [INFO] [stdout] 283 | let captures = none_to_error!(Charge::extract().captures(&line), InvalidInput); [INFO] [stdout] | --------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:304:20 [INFO] [stdout] | [INFO] [stdout] 304 | let captures = none_to_error!(Rt::extract().captures(&line), InvalidInput); [INFO] [stdout] | ----------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:317:16 [INFO] [stdout] | [INFO] [stdout] 317 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:320:20 [INFO] [stdout] | [INFO] [stdout] 320 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:334:16 [INFO] [stdout] | [INFO] [stdout] 334 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:353:18 [INFO] [stdout] | [INFO] [stdout] 353 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/mass_spectra/pwiz_mgf.rs:354:25 [INFO] [stdout] | [INFO] [stdout] 354 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/sra/complete.rs:11:9 [INFO] [stdout] | [INFO] [stdout] 11 | / ( [INFO] [stdout] 12 | | self.is_valid() && [INFO] [stdout] | |____________^ [INFO] [stdout] 13 | !self.description.is_empty() [INFO] [stdout] | _________________________________________^ [INFO] [stdout] 14 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 11 ~ self.is_valid() && [INFO] [stdout] 12 ~ !self.description.is_empty() [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/sra/valid.rs:10:9 [INFO] [stdout] | [INFO] [stdout] 10 | / ( [INFO] [stdout] 11 | | !self.seq_id.is_empty() && [INFO] [stdout] | |____________^ [INFO] [stdout] ... [INFO] [stdout] 15 | SequenceQualityRegex::validate().is_match(&self.quality) [INFO] [stdout] | _____________________________________________________________________^ [INFO] [stdout] 16 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 10 ~ !self.seq_id.is_empty() && [INFO] [stdout] 11 | self.length as usize == self.sequence.len() && [INFO] [stdout] 12 | self.length as usize == self.quality.len() && [INFO] [stdout] 13 | NucleotideRegex::validate().is_match(&self.sequence) && [INFO] [stdout] 14 ~ SequenceQualityRegex::validate().is_match(&self.quality) [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:195:18 [INFO] [stdout] | [INFO] [stdout] 195 | let header = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:198:20 [INFO] [stdout] | [INFO] [stdout] 198 | let captures = none_to_error!(FastqHeaderRegex::extract().captures(&header), InvalidInput); [INFO] [stdout] | --------------------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:210:20 [INFO] [stdout] | [INFO] [stdout] 210 | let sequence = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:215:18 [INFO] [stdout] | [INFO] [stdout] 215 | let header = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/sra/fastq.rs:219:19 [INFO] [stdout] | [INFO] [stdout] 219 | let quality = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/uniprot/complete.rs:11:9 [INFO] [stdout] | [INFO] [stdout] 11 | / ( [INFO] [stdout] 12 | | self.is_valid() && [INFO] [stdout] | |____________^ [INFO] [stdout] 13 | !self.proteome.is_empty() && [INFO] [stdout] 14 | !self.taxonomy.is_empty() [INFO] [stdout] | ______________________________________^ [INFO] [stdout] 15 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 11 ~ self.is_valid() && [INFO] [stdout] 12 | !self.proteome.is_empty() && [INFO] [stdout] 13 ~ !self.taxonomy.is_empty() [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around block return value [INFO] [stdout] --> src/db/uniprot/valid.rs:11:9 [INFO] [stdout] | [INFO] [stdout] 11 | / ( [INFO] [stdout] 12 | | // Do not try to validate the Organism [INFO] [stdout] 13 | | // With virus names being non-standard, it is impossible [INFO] [stdout] 14 | | // with an NFA, and extremely time complex otherwise. [INFO] [stdout] 15 | | self.sequence_version > 0 && [INFO] [stdout] | |____________^ [INFO] [stdout] ... [INFO] [stdout] 33 | ) [INFO] [stdout] | ______________^ [INFO] [stdout] 34 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 11 ~ self.sequence_version > 0 && [INFO] [stdout] 12 | self.protein_evidence < ProteinEvidence::Unknown && [INFO] [stdout] 13 | self.mass > 0 && [INFO] [stdout] 14 | self.length as usize == self.sequence.len() && [INFO] [stdout] 15 | !self.sequence.is_empty() && [INFO] [stdout] 16 | !self.name.is_empty() && [INFO] [stdout] ... [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/csv.rs:145:15 [INFO] [stdout] | [INFO] [stdout] 145 | let row = none_to_error!(opt, InvalidInput)?; [INFO] [stdout] | --------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/csv.rs:384:8 [INFO] [stdout] | [INFO] [stdout] 384 | Ok(none_to_error!(iterator_from_csv(reader, delimiter).next(), InvalidInput)?) [INFO] [stdout] | ------------------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/fasta.rs:267:20 [INFO] [stdout] | [INFO] [stdout] 267 | let captures = none_to_error!(R::extract().captures(&header), InvalidInput); [INFO] [stdout] | ------------------------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/fasta.rs:298:20 [INFO] [stdout] | [INFO] [stdout] 298 | let captures = none_to_error!(R::extract().captures(&header), InvalidInput); [INFO] [stdout] | ------------------------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/fasta.rs:332:18 [INFO] [stdout] | [INFO] [stdout] 332 | let header = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stdout] | ------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trailing semicolon in macro used in expression position [INFO] [stdout] --> src/util/macros.rs:301:10 [INFO] [stdout] | [INFO] [stdout] 301 | }; [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] ::: src/db/uniprot/xml.rs:51:5 [INFO] [stdout] | [INFO] [stdout] 51 | none_to_error!(iterator_from_xml(reader).next(), UnexpectedEof) [INFO] [stdout] | --------------------------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stdout] = note: for more information, see issue #79813 [INFO] [stdout] = note: macro invocations at the end of a block are treated as expressions [INFO] [stdout] = note: to ignore the value produced by the macro, add a semicolon after the invocation of `none_to_error` [INFO] [stdout] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead. [INFO] [stdout] --> src/util/writer.rs:1:16 [INFO] [stdout] | [INFO] [stdout] 1 | use ref_slice::ref_slice; [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead. [INFO] [stdout] --> src/util/writer.rs:34:35 [INFO] [stdout] | [INFO] [stdout] 34 | self.writer.write_all(ref_slice(&self.delimiter))?; [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/util/alias.rs:9:26 [INFO] [stdout] | [INFO] [stdout] 9 | pub type ErrorType = Box; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: use `dyn` [INFO] [stdout] | [INFO] [stdout] 9 - pub type ErrorType = Box; [INFO] [stdout] 9 + pub type ErrorType = Box; [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/util/error.rs:168:32 [INFO] [stdout] | [INFO] [stdout] 168 | fn cause(&self) -> Option<&StdError> { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: use `dyn` [INFO] [stdout] | [INFO] [stdout] 168 - fn cause(&self) -> Option<&StdError> { [INFO] [stdout] 168 + fn cause(&self) -> Option<&dyn StdError> { [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:112:45 [INFO] [stdout] | [INFO] [stdout] 112 | write!(f, "UniProt error: {}", self.description()) [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:144:43 [INFO] [stdout] | [INFO] [stdout] 144 | ErrorKind::Io(ref err) => err.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:145:45 [INFO] [stdout] | [INFO] [stdout] 145 | ErrorKind::Utf8(ref err) => err.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:146:49 [INFO] [stdout] | [INFO] [stdout] 146 | ErrorKind::FromUtf8(ref err) => err.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:147:49 [INFO] [stdout] | [INFO] [stdout] 147 | ErrorKind::ParseInt(ref err) => err.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:151:42 [INFO] [stdout] | [INFO] [stdout] 151 | XmlError::Io(ref e) => e.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/util/error.rs:152:44 [INFO] [stdout] | [INFO] [stdout] 152 | XmlError::Utf8(ref e) => e.description(), [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `core::str::::trim_right`: superseded by `trim_end` [INFO] [stdout] --> src/io/uniprot.rs:167:37 [INFO] [stdout] | [INFO] [stdout] 167 | assert_eq!(expected, actual.trim_right()); [INFO] [stdout] | ^^^^^^^^^^ help: replace the use of the deprecated associated function: `trim_end` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 71 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 19.58s [INFO] running `Command { std: "docker" "inspect" "ab29522571b8b320b2678ca3580f2df1d6c1f45f858619135bac44f0f787cf6d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ab29522571b8b320b2678ca3580f2df1d6c1f45f858619135bac44f0f787cf6d", kill_on_drop: false }` [INFO] [stdout] ab29522571b8b320b2678ca3580f2df1d6c1f45f858619135bac44f0f787cf6d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 202eae8da72b09fb9cb9ce6b26dc2db03e704a2f5db642619a0c50326f9db91b [INFO] running `Command { std: "docker" "start" "-a" "202eae8da72b09fb9cb9ce6b26dc2db03e704a2f5db642619a0c50326f9db91b", kill_on_drop: false }` [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> src/db/mass_spectra/complete.rs:11:9 [INFO] [stderr] | [INFO] [stderr] 11 | / ( [INFO] [stderr] 12 | | self.is_valid() && [INFO] [stderr] | |____________^ [INFO] [stderr] 13 | self.ms_level != 0 && [INFO] [stderr] 14 | !self.filter.is_empty() [INFO] [stderr] | ____________________________________^ [INFO] [stderr] 15 | | ) [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_parens)]` on by default [INFO] [stderr] help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] 11 ~ self.is_valid() && [INFO] [stderr] 12 | self.ms_level != 0 && [INFO] [stderr] 13 ~ !self.filter.is_empty() [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> src/db/mass_spectra/valid.rs:9:9 [INFO] [stderr] | [INFO] [stderr] 9 | / ( [INFO] [stderr] 10 | | self.num != 0 && [INFO] [stderr] | |____________^ [INFO] [stderr] ... [INFO] [stderr] 30 | ) [INFO] [stderr] | ______________^ [INFO] [stderr] 31 | | ) [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] 9 ~ self.num != 0 && [INFO] [stderr] 10 | self.rt >= 0.0 && [INFO] [stderr] 11 | !self.peaks.is_empty() && [INFO] [stderr] 12 | // If the MS level is 2 or higher, check the parents are set. [INFO] [stderr] 13 | ( [INFO] [stderr] 14 | ( [INFO] [stderr] ... [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/fullms_mgf.rs:205:16 [INFO] [stderr] | [INFO] [stderr] 205 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(semicolon_in_expressions_from_macros)]` on by default [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/fullms_mgf.rs:206:20 [INFO] [stderr] | [INFO] [stderr] 206 | let captures = none_to_error!(Scan::extract().captures(&line), InvalidInput); [INFO] [stderr] | ------------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/fullms_mgf.rs:222:16 [INFO] [stderr] | [INFO] [stderr] 222 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/fullms_mgf.rs:223:20 [INFO] [stderr] | [INFO] [stderr] 223 | let captures = none_to_error!(Rt::extract().captures(&line), InvalidInput); [INFO] [stderr] | ----------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/fullms_mgf.rs:237:16 [INFO] [stderr] | [INFO] [stderr] 237 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/fullms_mgf.rs:249:16 [INFO] [stderr] | [INFO] [stderr] 249 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/fullms_mgf.rs:261:16 [INFO] [stderr] | [INFO] [stderr] 261 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/fullms_mgf.rs:273:16 [INFO] [stderr] | [INFO] [stderr] 273 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/fullms_mgf.rs:292:18 [INFO] [stderr] | [INFO] [stderr] 292 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/fullms_mgf.rs:293:25 [INFO] [stderr] | [INFO] [stderr] 293 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/msconvert_mgf.rs:226:16 [INFO] [stderr] | [INFO] [stderr] 226 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/msconvert_mgf.rs:240:16 [INFO] [stderr] | [INFO] [stderr] 240 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/msconvert_mgf.rs:241:20 [INFO] [stderr] | [INFO] [stderr] 241 | let captures = none_to_error!(Title::extract().captures(&line), InvalidInput); [INFO] [stderr] | -------------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/msconvert_mgf.rs:258:16 [INFO] [stderr] | [INFO] [stderr] 258 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/msconvert_mgf.rs:259:20 [INFO] [stderr] | [INFO] [stderr] 259 | let captures = none_to_error!(Rt::extract().captures(&line), InvalidInput); [INFO] [stderr] | ----------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/msconvert_mgf.rs:275:16 [INFO] [stderr] | [INFO] [stderr] 275 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/msconvert_mgf.rs:276:20 [INFO] [stderr] | [INFO] [stderr] 276 | let captures = none_to_error!(PepMass::extract().captures(&line), InvalidInput); [INFO] [stderr] | ---------------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/msconvert_mgf.rs:298:27 [INFO] [stderr] | [INFO] [stderr] 298 | let peeked_line = none_to_error!(lines.peek(), InvalidInput); [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/msconvert_mgf.rs:318:24 [INFO] [stderr] | [INFO] [stderr] 318 | let captures = none_to_error!(Charge::extract().captures(&line), InvalidInput); [INFO] [stderr] | --------------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/msconvert_mgf.rs:348:18 [INFO] [stderr] | [INFO] [stderr] 348 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/msconvert_mgf.rs:349:25 [INFO] [stderr] | [INFO] [stderr] 349 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pava_mgf.rs:206:16 [INFO] [stderr] | [INFO] [stderr] 206 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pava_mgf.rs:220:16 [INFO] [stderr] | [INFO] [stderr] 220 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pava_mgf.rs:221:20 [INFO] [stderr] | [INFO] [stderr] 221 | let captures = none_to_error!(Title::extract().captures(&line), InvalidInput); [INFO] [stderr] | -------------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pava_mgf.rs:241:16 [INFO] [stderr] | [INFO] [stderr] 241 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pava_mgf.rs:242:20 [INFO] [stderr] | [INFO] [stderr] 242 | let captures = none_to_error!(PepMass::extract().captures(&line), InvalidInput); [INFO] [stderr] | ---------------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pava_mgf.rs:261:16 [INFO] [stderr] | [INFO] [stderr] 261 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pava_mgf.rs:262:20 [INFO] [stderr] | [INFO] [stderr] 262 | let captures = none_to_error!(Charge::extract().captures(&line), InvalidInput); [INFO] [stderr] | --------------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pava_mgf.rs:288:18 [INFO] [stderr] | [INFO] [stderr] 288 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pava_mgf.rs:289:25 [INFO] [stderr] | [INFO] [stderr] 289 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pwiz_mgf.rs:230:16 [INFO] [stderr] | [INFO] [stderr] 230 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pwiz_mgf.rs:244:16 [INFO] [stderr] | [INFO] [stderr] 244 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pwiz_mgf.rs:245:20 [INFO] [stderr] | [INFO] [stderr] 245 | let captures = none_to_error!(Title::extract().captures(&line), InvalidInput); [INFO] [stderr] | -------------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pwiz_mgf.rs:262:16 [INFO] [stderr] | [INFO] [stderr] 262 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pwiz_mgf.rs:263:20 [INFO] [stderr] | [INFO] [stderr] 263 | let captures = none_to_error!(PepMass::extract().captures(&line), InvalidInput); [INFO] [stderr] | ---------------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pwiz_mgf.rs:283:20 [INFO] [stderr] | [INFO] [stderr] 283 | let captures = none_to_error!(Charge::extract().captures(&line), InvalidInput); [INFO] [stderr] | --------------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pwiz_mgf.rs:304:20 [INFO] [stderr] | [INFO] [stderr] 304 | let captures = none_to_error!(Rt::extract().captures(&line), InvalidInput); [INFO] [stderr] | ----------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pwiz_mgf.rs:317:16 [INFO] [stderr] | [INFO] [stderr] 317 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pwiz_mgf.rs:320:20 [INFO] [stderr] | [INFO] [stderr] 320 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pwiz_mgf.rs:334:16 [INFO] [stderr] | [INFO] [stderr] 334 | let line = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pwiz_mgf.rs:353:18 [INFO] [stderr] | [INFO] [stderr] 353 | let mz = none_to_error!(items.next(), InvalidInput); [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/mass_spectra/pwiz_mgf.rs:354:25 [INFO] [stderr] | [INFO] [stderr] 354 | let intensity = none_to_error!(items.next(), InvalidInput); [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> src/db/sra/complete.rs:11:9 [INFO] [stderr] | [INFO] [stderr] 11 | / ( [INFO] [stderr] 12 | | self.is_valid() && [INFO] [stderr] | |____________^ [INFO] [stderr] 13 | !self.description.is_empty() [INFO] [stderr] | _________________________________________^ [INFO] [stderr] 14 | | ) [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] 11 ~ self.is_valid() && [INFO] [stderr] 12 ~ !self.description.is_empty() [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> src/db/sra/valid.rs:10:9 [INFO] [stderr] | [INFO] [stderr] 10 | / ( [INFO] [stderr] 11 | | !self.seq_id.is_empty() && [INFO] [stderr] | |____________^ [INFO] [stderr] ... [INFO] [stderr] 15 | SequenceQualityRegex::validate().is_match(&self.quality) [INFO] [stderr] | _____________________________________________________________________^ [INFO] [stderr] 16 | | ) [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] 10 ~ !self.seq_id.is_empty() && [INFO] [stderr] 11 | self.length as usize == self.sequence.len() && [INFO] [stderr] 12 | self.length as usize == self.quality.len() && [INFO] [stderr] 13 | NucleotideRegex::validate().is_match(&self.sequence) && [INFO] [stderr] 14 ~ SequenceQualityRegex::validate().is_match(&self.quality) [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/sra/fastq.rs:195:18 [INFO] [stderr] | [INFO] [stderr] 195 | let header = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/sra/fastq.rs:198:20 [INFO] [stderr] | [INFO] [stderr] 198 | let captures = none_to_error!(FastqHeaderRegex::extract().captures(&header), InvalidInput); [INFO] [stderr] | --------------------------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/sra/fastq.rs:210:20 [INFO] [stderr] | [INFO] [stderr] 210 | let sequence = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/sra/fastq.rs:215:18 [INFO] [stderr] | [INFO] [stderr] 215 | let header = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/sra/fastq.rs:219:19 [INFO] [stderr] | [INFO] [stderr] 219 | let quality = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> src/db/uniprot/complete.rs:11:9 [INFO] [stderr] | [INFO] [stderr] 11 | / ( [INFO] [stderr] 12 | | self.is_valid() && [INFO] [stderr] | |____________^ [INFO] [stderr] 13 | !self.proteome.is_empty() && [INFO] [stderr] 14 | !self.taxonomy.is_empty() [INFO] [stderr] | ______________________________________^ [INFO] [stderr] 15 | | ) [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] 11 ~ self.is_valid() && [INFO] [stderr] 12 | !self.proteome.is_empty() && [INFO] [stderr] 13 ~ !self.taxonomy.is_empty() [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> src/db/uniprot/valid.rs:11:9 [INFO] [stderr] | [INFO] [stderr] 11 | / ( [INFO] [stderr] 12 | | // Do not try to validate the Organism [INFO] [stderr] 13 | | // With virus names being non-standard, it is impossible [INFO] [stderr] 14 | | // with an NFA, and extremely time complex otherwise. [INFO] [stderr] 15 | | self.sequence_version > 0 && [INFO] [stderr] | |____________^ [INFO] [stderr] ... [INFO] [stderr] 33 | ) [INFO] [stderr] | ______________^ [INFO] [stderr] 34 | | ) [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] 11 ~ self.sequence_version > 0 && [INFO] [stderr] 12 | self.protein_evidence < ProteinEvidence::Unknown && [INFO] [stderr] 13 | self.mass > 0 && [INFO] [stderr] 14 | self.length as usize == self.sequence.len() && [INFO] [stderr] 15 | !self.sequence.is_empty() && [INFO] [stderr] 16 | !self.name.is_empty() && [INFO] [stderr] ... [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/uniprot/csv.rs:145:15 [INFO] [stderr] | [INFO] [stderr] 145 | let row = none_to_error!(opt, InvalidInput)?; [INFO] [stderr] | --------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/uniprot/csv.rs:384:8 [INFO] [stderr] | [INFO] [stderr] 384 | Ok(none_to_error!(iterator_from_csv(reader, delimiter).next(), InvalidInput)?) [INFO] [stderr] | ------------------------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/uniprot/fasta.rs:267:20 [INFO] [stderr] | [INFO] [stderr] 267 | let captures = none_to_error!(R::extract().captures(&header), InvalidInput); [INFO] [stderr] | ------------------------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/uniprot/fasta.rs:298:20 [INFO] [stderr] | [INFO] [stderr] 298 | let captures = none_to_error!(R::extract().captures(&header), InvalidInput); [INFO] [stderr] | ------------------------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/uniprot/fasta.rs:332:18 [INFO] [stderr] | [INFO] [stderr] 332 | let header = none_to_error!(lines.next(), InvalidInput)?; [INFO] [stderr] | ------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: trailing semicolon in macro used in expression position [INFO] [stderr] --> src/util/macros.rs:301:10 [INFO] [stderr] | [INFO] [stderr] 301 | }; [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] ::: src/db/uniprot/xml.rs:51:5 [INFO] [stderr] | [INFO] [stderr] 51 | none_to_error!(iterator_from_xml(reader).next(), UnexpectedEof) [INFO] [stderr] | --------------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #79813 [INFO] [stderr] = note: macro invocations at the end of a block are treated as expressions [INFO] [stderr] = note: to ignore the value produced by the macro, add a semicolon after the invocation of `none_to_error` [INFO] [stderr] = note: this warning originates in the macro `none_to_error` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead. [INFO] [stderr] --> src/util/writer.rs:1:16 [INFO] [stderr] | [INFO] [stderr] 1 | use ref_slice::ref_slice; [INFO] [stderr] | ^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(deprecated)]` on by default [INFO] [stderr] [INFO] [stderr] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead. [INFO] [stderr] --> src/util/writer.rs:34:35 [INFO] [stderr] | [INFO] [stderr] 34 | self.writer.write_all(ref_slice(&self.delimiter))?; [INFO] [stderr] | ^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/util/alias.rs:9:26 [INFO] [stderr] | [INFO] [stderr] 9 | pub type ErrorType = Box; [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stderr] = note: for more information, see [INFO] [stderr] help: use `dyn` [INFO] [stderr] | [INFO] [stderr] 9 - pub type ErrorType = Box; [INFO] [stderr] 9 + pub type ErrorType = Box; [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/util/error.rs:168:32 [INFO] [stderr] | [INFO] [stderr] 168 | fn cause(&self) -> Option<&StdError> { [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stderr] = note: for more information, see [INFO] [stderr] help: use `dyn` [INFO] [stderr] | [INFO] [stderr] 168 - fn cause(&self) -> Option<&StdError> { [INFO] [stderr] 168 + fn cause(&self) -> Option<&dyn StdError> { [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stderr] --> src/util/error.rs:112:45 [INFO] [stderr] | [INFO] [stderr] 112 | write!(f, "UniProt error: {}", self.description()) [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stderr] --> src/util/error.rs:144:43 [INFO] [stderr] | [INFO] [stderr] 144 | ErrorKind::Io(ref err) => err.description(), [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stderr] --> src/util/error.rs:145:45 [INFO] [stderr] | [INFO] [stderr] 145 | ErrorKind::Utf8(ref err) => err.description(), [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stderr] --> src/util/error.rs:146:49 [INFO] [stderr] | [INFO] [stderr] 146 | ErrorKind::FromUtf8(ref err) => err.description(), [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stderr] --> src/util/error.rs:147:49 [INFO] [stderr] | [INFO] [stderr] 147 | ErrorKind::ParseInt(ref err) => err.description(), [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stderr] --> src/util/error.rs:151:42 [INFO] [stderr] | [INFO] [stderr] 151 | XmlError::Io(ref e) => e.description(), [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stderr] --> src/util/error.rs:152:44 [INFO] [stderr] | [INFO] [stderr] 152 | XmlError::Utf8(ref e) => e.description(), [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated associated function `core::str::::trim_right`: superseded by `trim_end` [INFO] [stdout] [INFO] [stderr] --> src/io/uniprot.rs:167:37 [INFO] [stdout] running 101 tests [INFO] [stderr] | [INFO] [stdout] test bio::proteins::tests::one_letter_mass ... ok [INFO] [stderr] 167 | assert_eq!(expected, actual.trim_right()); [INFO] [stdout] test bio::proteins::tests::sequence_mass_monoisotopic ... ok [INFO] [stderr] | ^^^^^^^^^^ help: replace the use of the deprecated associated function: `trim_end` [INFO] [stdout] test bio::proteins::tests::sequence_mass_average ... ok [INFO] [stderr] [INFO] [stdout] test db::mass_spectra::mgf::tests::msconvert_mgf_test ... ignored [INFO] [stderr] warning: `bdb` (lib) generated 70 warnings [INFO] [stdout] test db::mass_spectra::mgf::tests::estimate_size_test ... ok [INFO] [stderr] warning: `bdb` (lib test) generated 71 warnings (70 duplicates) [INFO] [stdout] test db::mass_spectra::mgf::tests::mgf_iter_test ... ok [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.15s [INFO] [stdout] test db::mass_spectra::peak::tests::debug_peak ... ok [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/bdb-c050cfe4a1fb18ce) [INFO] [stdout] test db::mass_spectra::peak_list::tests::equality_peak_list ... ok [INFO] [stdout] test db::mass_spectra::mgf::tests::iterator_to_msconvert_mgf_test ... ok [INFO] [stdout] test db::mass_spectra::mgf::tests::iterator_to_pava_mgf_test ... ok [INFO] [stdout] test db::mass_spectra::mgf::tests::iterator_to_pwiz_mgf_test ... ok [INFO] [stdout] test db::mass_spectra::peak::tests::equality_peak ... ok [INFO] [stdout] test db::mass_spectra::peak_list::tests::debug_peak_list ... ok [INFO] [stdout] test db::mass_spectra::re::tests::fullms_mgf_rt_regex_test ... ok [INFO] [stdout] test db::mass_spectra::re::tests::fullms_mgf_scan_regex_test ... ok [INFO] [stdout] test db::mass_spectra::re::tests::msconvert_mgf_pepmass_regex_test ... ok [INFO] [stdout] test db::mass_spectra::record::tests::debug_record ... ok [INFO] [stdout] test db::mass_spectra::record::tests::equality_record ... ok [INFO] [stdout] test db::mass_spectra::record_list::tests::debug_record_list ... ok [INFO] [stdout] test db::mass_spectra::re::tests::msconvert_mgf_title_regex_test ... ok [INFO] [stdout] test db::sra::fastq::tests::fastq_iter_test ... ok [INFO] [stdout] test db::mass_spectra::record_list::tests::equality_record_list ... ok [INFO] [stdout] test db::mass_spectra::mgf::tests::iterator_from_msconvert_mgf_test ... ok [INFO] [stdout] test db::mass_spectra::mgf::tests::iterator_from_pava_mgf_test ... ok [INFO] [stdout] test db::mass_spectra::re::tests::pava_mgf_charge_regex_test ... ok [INFO] [stdout] test db::mass_spectra::re::tests::pava_mgf_pepmass_regex_test ... ok [INFO] [stdout] test db::mass_spectra::re::tests::msconvert_mgf_charge_regex_test ... ok [INFO] [stdout] test db::sra::re::tests::fastq_header_regex ... ok [INFO] [stdout] test db::sra::re::tests::sequence_quality_regex ... ok [INFO] [stdout] test db::mass_spectra::re::tests::pava_mgf_title_regex_test ... ok [INFO] [stdout] test db::uniprot::client::tests::by_id_list_test ... ignored [INFO] [stdout] test db::uniprot::client::tests::by_id_test ... ignored [INFO] [stdout] test db::sra::record::tests::debug_record ... ok [INFO] [stdout] test db::mass_spectra::mgf::tests::iterator_from_pwiz_mgf_test ... ok [INFO] [stdout] test db::sra::record::tests::equality_record ... ok [INFO] [stdout] test db::uniprot::client::tests::by_mnemonic_list_test ... ignored [INFO] [stdout] test db::uniprot::client::tests::by_mnemonic_test ... ignored [INFO] [stdout] test db::sra::record::tests::properties_record ... ok [INFO] [stdout] test db::mass_spectra::re::tests::pwiz_mgf_charge_regex_test ... ok [INFO] [stdout] test db::uniprot::csv::tests::estimate_size_test ... ok [INFO] [stdout] test db::mass_spectra::re::tests::msconvert_mgf_rt_regex_test ... ok [INFO] [stdout] test db::uniprot::fasta::tests::estimate_size_test ... ok [INFO] [stdout] test db::uniprot::evidence::tests::protein_evidence_xml_verbose_test ... ok [INFO] [stdout] test db::uniprot::evidence::tests::serialize_protein_evidence_test ... ok [INFO] [stdout] test db::uniprot::fasta::tests::fasta_iter_test ... ok [INFO] [stdout] test db::uniprot::fasta::tests::human_fasta_test ... ignored [INFO] [stdout] test db::uniprot::re::tests::all_proteome_regex ... ignored [INFO] [stdout] test db::uniprot::re::tests::all_taxonomy_regex ... ignored [INFO] [stdout] test db::uniprot::re::tests::human_accession_regex ... ignored [INFO] [stdout] test db::uniprot::re::tests::human_aminoacid_regex ... ignored [INFO] [stdout] test db::uniprot::re::tests::human_fasta_header_regex ... ignored [INFO] [stdout] test db::uniprot::evidence::tests::debug_protein_evidence_test ... ok [INFO] [stdout] test db::uniprot::evidence::tests::protein_evidence_verbose_test ... ok [INFO] [stdout] test db::sra::re::tests::nucleotide_regex ... ok [INFO] [stdout] test db::uniprot::re::tests::accession_regex ... ok [INFO] [stdout] test db::uniprot::csv::tests::iterator_to_csv_test ... ok [INFO] [stdout] test db::uniprot::fasta::tests::iterator_to_fasta_test ... ok [INFO] [stdout] test db::uniprot::re::tests::aminoacid_regex ... ok [INFO] [stdout] test db::uniprot::re::tests::gene_regex ... ok [INFO] [stdout] test db::uniprot::re::tests::human_gene_regex ... ignored [INFO] [stdout] test db::uniprot::re::tests::human_mnemonic_regex ... ignored [INFO] [stdout] test db::uniprot::csv::tests::iterator_from_csv_test ... ok [INFO] [stdout] test db::uniprot::record::tests::equality_record ... ok [INFO] [stdout] test db::mass_spectra::re::tests::pwiz_mgf_title_regex_test ... ok [INFO] [stdout] test db::uniprot::record::tests::debug_record ... ok [INFO] [stdout] test db::uniprot::record::tests::xml_record ... ok [INFO] [stdout] test db::uniprot::record::tests::csv_record ... ok [INFO] [stdout] test db::uniprot::re::tests::taxonomy_regex ... ok [INFO] [stdout] test db::uniprot::record_list::tests::debug_list ... ok [INFO] [stdout] test db::mass_spectra::re::tests::pwiz_mgf_pepmass_regex_test ... ok [INFO] [stdout] test db::uniprot::record::tests::properties_record ... ok [INFO] [stdout] test db::uniprot::record_list::tests::list_csv_test ... ignored [INFO] [stdout] test db::uniprot::record_list::tests::list_fasta_test ... ignored [INFO] [stdout] test db::uniprot::record_list::tests::list_xml_test ... ignored [INFO] [stdout] test db::uniprot::record_list::tests::equality_list ... ok [INFO] [stdout] test db::uniprot::re::tests::proteome_regex ... ok [INFO] [stdout] test db::uniprot::record_list::tests::xml_list ... ok [INFO] [stdout] test db::uniprot::record_list::tests::csv_list ... ok [INFO] [stdout] test db::uniprot::xml::tests::atcc_xml_test ... ignored [INFO] [stdout] test db::uniprot::xml::tests::bsa_test ... ignored [INFO] [stdout] test db::uniprot::xml::tests::dpb1_test ... ignored [INFO] [stdout] test db::uniprot::section::tests::serialize_section_test ... ok [INFO] [stdout] test db::uniprot::xml::tests::gapdh_test ... ignored [INFO] [stdout] test db::uniprot::record_list::tests::properties_list ... ok [INFO] [stdout] test io::uniprot::tests::csv_test ... ignored [INFO] [stdout] test io::uniprot::tests::fasta_test ... ignored [INFO] [stdout] test io::uniprot::tests::xml_test ... ignored [INFO] [stdout] test db::uniprot::section::tests::debug_section_test ... ok [INFO] [stdout] test db::uniprot::xml::tests::estimate_size_test ... ok [INFO] [stdout] test util::xml::tests::xml_read_test ... ok [INFO] [stdout] test db::uniprot::re::tests::swissprot_header_regex ... ok [INFO] [stdout] test db::mass_spectra::re::tests::pwiz_mgf_rt_regex_test ... ok [INFO] [stdout] test db::uniprot::xml::tests::iterator_to_xml_test ... ok [INFO] [stdout] test util::xml::tests::xml_write_test ... ok [INFO] [stdout] test db::uniprot::xml::tests::iterator_from_xml_test ... ok [INFO] [stdout] test util::xml::tests::xml_declaration_test ... ok [INFO] [stdout] test db::uniprot::re::tests::mnemonic_regex ... ok [INFO] [stdout] test db::uniprot::record::tests::fasta_record ... ok [INFO] [stdout] test db::uniprot::fasta::tests::iterator_from_fasta_test ... ok [INFO] [stdout] test db::uniprot::record_list::tests::fasta_list ... ok [INFO] [stdout] test db::uniprot::re::tests::trembl_header_regex ... ok [INFO] [stderr] Doc-tests bdb [INFO] [stdout] [INFO] [stdout] test result: ok. 78 passed; 0 failed; 23 ignored; 0 measured; 0 filtered out; finished in 0.45s [INFO] [stdout] [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> /opt/rustwide/workdir/src/db/mass_spectra/complete.rs:11:9 [INFO] [stderr] | [INFO] [stderr] 11 | / ( [INFO] [stderr] 12 | | self.is_valid() && [INFO] [stderr] | |____________^ [INFO] [stderr] 13 | self.ms_level != 0 && [INFO] [stderr] 14 | !self.filter.is_empty() [INFO] [stderr] | ____________________________________^ [INFO] [stderr] 15 | | ) [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_parens)]` on by default [INFO] [stderr] help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] 11 ~ self.is_valid() && [INFO] [stderr] 12 | self.ms_level != 0 && [INFO] [stderr] 13 ~ !self.filter.is_empty() [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> /opt/rustwide/workdir/src/db/mass_spectra/valid.rs:9:9 [INFO] [stderr] | [INFO] [stderr] 9 | / ( [INFO] [stderr] 10 | | self.num != 0 && [INFO] [stderr] | |____________^ [INFO] [stderr] ... [INFO] [stderr] 30 | ) [INFO] [stderr] | ______________^ [INFO] [stderr] 31 | | ) [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] 9 ~ self.num != 0 && [INFO] [stderr] 10 | self.rt >= 0.0 && [INFO] [stderr] 11 | !self.peaks.is_empty() && [INFO] [stderr] 12 | // If the MS level is 2 or higher, check the parents are set. [INFO] [stderr] 13 | ( [INFO] [stderr] 14 | ( [INFO] [stderr] ... [INFO] [stderr] [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> /opt/rustwide/workdir/src/db/sra/complete.rs:11:9 [INFO] [stderr] | [INFO] [stderr] 11 | / ( [INFO] [stderr] 12 | | self.is_valid() && [INFO] [stderr] | |____________^ [INFO] [stderr] 13 | !self.description.is_empty() [INFO] [stderr] | _________________________________________^ [INFO] [stderr] 14 | | ) [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] 11 ~ self.is_valid() && [INFO] [stderr] 12 ~ !self.description.is_empty() [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> /opt/rustwide/workdir/src/db/sra/valid.rs:10:9 [INFO] [stderr] | [INFO] [stderr] 10 | / ( [INFO] [stderr] 11 | | !self.seq_id.is_empty() && [INFO] [stderr] | |____________^ [INFO] [stderr] ... [INFO] [stderr] 15 | SequenceQualityRegex::validate().is_match(&self.quality) [INFO] [stderr] | _____________________________________________________________________^ [INFO] [stderr] 16 | | ) [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] 10 ~ !self.seq_id.is_empty() && [INFO] [stderr] 11 | self.length as usize == self.sequence.len() && [INFO] [stderr] 12 | self.length as usize == self.quality.len() && [INFO] [stderr] 13 | NucleotideRegex::validate().is_match(&self.sequence) && [INFO] [stderr] 14 ~ SequenceQualityRegex::validate().is_match(&self.quality) [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> /opt/rustwide/workdir/src/db/uniprot/complete.rs:11:9 [INFO] [stderr] | [INFO] [stderr] 11 | / ( [INFO] [stderr] 12 | | self.is_valid() && [INFO] [stderr] | |____________^ [INFO] [stderr] 13 | !self.proteome.is_empty() && [INFO] [stderr] 14 | !self.taxonomy.is_empty() [INFO] [stderr] | ______________________________________^ [INFO] [stderr] 15 | | ) [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] 11 ~ self.is_valid() && [INFO] [stderr] 12 | !self.proteome.is_empty() && [INFO] [stderr] 13 ~ !self.taxonomy.is_empty() [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> /opt/rustwide/workdir/src/db/uniprot/valid.rs:11:9 [INFO] [stderr] | [INFO] [stderr] 11 | / ( [INFO] [stderr] 12 | | // Do not try to validate the Organism [INFO] [stderr] 13 | | // With virus names being non-standard, it is impossible [INFO] [stderr] 14 | | // with an NFA, and extremely time complex otherwise. [INFO] [stderr] 15 | | self.sequence_version > 0 && [INFO] [stderr] | |____________^ [INFO] [stderr] ... [INFO] [stderr] 33 | ) [INFO] [stderr] | ______________^ [INFO] [stderr] 34 | | ) [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] 11 ~ self.sequence_version > 0 && [INFO] [stderr] 12 | self.protein_evidence < ProteinEvidence::Unknown && [INFO] [stderr] 13 | self.mass > 0 && [INFO] [stderr] 14 | self.length as usize == self.sequence.len() && [INFO] [stderr] 15 | !self.sequence.is_empty() && [INFO] [stderr] 16 | !self.name.is_empty() && [INFO] [stderr] ... [INFO] [stderr] [INFO] [stderr] warning: 6 warnings emitted [INFO] [stderr] [INFO] [stdout] [INFO] [stdout] running 11 tests [INFO] [stdout] test src/util/macros.rs - util::macros::nonzero_to_string (line 39) ... FAILED [INFO] [stdout] test src/util/macros.rs - util::macros::nonzero_float_to_string (line 64) ... FAILED [INFO] [stdout] test src/util/macros.rs - util::macros::binary_choice (line 12) ... ok [INFO] [stdout] test src/util/macros.rs - util::macros::from_commas (line 194) ... ok [INFO] [stdout] test src/util/macros.rs - util::macros::nonzero_from_commas (line 242) ... ok [INFO] [stdout] test src/util/macros.rs - util::macros::to_commas (line 147) ... ok [INFO] [stdout] test src/util/macros.rs - util::macros::nonzero_float_from_string (line 119) ... ok [INFO] [stdout] test src/util/macros.rs - util::macros::strip_commas (line 166) ... ok [INFO] [stdout] test src/util/macros.rs - util::macros::write_alls (line 268) ... ok [INFO] [stdout] test src/util/macros.rs - util::macros::nonzero_to_commas (line 216) ... ok [INFO] [stdout] test src/util/macros.rs - util::macros::nonzero_from_string (line 89) ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- src/util/macros.rs - util::macros::nonzero_to_string (line 39) stdout ---- [INFO] [stdout] error[E0603]: module `util` is private [INFO] [stdout] --> src/util/macros.rs:41:10 [INFO] [stdout] | [INFO] [stdout] 3 | use bdb::util::Ntoa; [INFO] [stdout] | ^^^^ private module [INFO] [stdout] | [INFO] [stdout] note: the module `util` is defined here [INFO] [stdout] --> /opt/rustwide/workdir/src/lib.rs:34:1 [INFO] [stdout] | [INFO] [stdout] 34 | pub(crate) mod util; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] error[E0599]: no method named `ntoa` found for type `i32` in the current scope [INFO] [stdout] --> src/util/macros.rs:43:12 [INFO] [stdout] | [INFO] [stdout] 5 | assert_eq!(nonzero_to_string!(0 as i32), ""); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ method not found in `i32` [INFO] [stdout] | [INFO] [stdout] ::: /opt/rustwide/workdir/src/util/fmt.rs:45:8 [INFO] [stdout] | [INFO] [stdout] 45 | fn ntoa(&self) -> ResultType; [INFO] [stdout] | ---- the method is available for `i32` here [INFO] [stdout] | [INFO] [stdout] = help: items from traits can only be used if the trait is in scope [INFO] [stdout] = note: this error originates in the macro `nonzero_to_string` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] help: the following trait is implemented but not in scope; perhaps add a `use` for it: [INFO] [stdout] | [INFO] [stdout] 3 | use bdb::util::fmt::Ntoa; [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] error[E0599]: no method named `ntoa` found for type `i32` in the current scope [INFO] [stdout] --> src/util/macros.rs:44:12 [INFO] [stdout] | [INFO] [stdout] 6 | assert_eq!(nonzero_to_string!(1 as i32), "1"); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ method not found in `i32` [INFO] [stdout] | [INFO] [stdout] ::: /opt/rustwide/workdir/src/util/fmt.rs:45:8 [INFO] [stdout] | [INFO] [stdout] 45 | fn ntoa(&self) -> ResultType; [INFO] [stdout] | ---- the method is available for `i32` here [INFO] [stdout] | [INFO] [stdout] = help: items from traits can only be used if the trait is in scope [INFO] [stdout] = note: this error originates in the macro `nonzero_to_string` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] help: the following trait is implemented but not in scope; perhaps add a `use` for it: [INFO] [stdout] | [INFO] [stdout] 3 | use bdb::util::fmt::Ntoa; [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] error: aborting due to 3 previous errors [INFO] [stdout] [INFO] [stdout] Some errors have detailed explanations: E0599, E0603. [INFO] [stdout] For more information about an error, try `rustc --explain E0599`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/util/macros.rs - util::macros::nonzero_float_to_string (line 64) stdout ---- [INFO] [stdout] error[E0603]: module `util` is private [INFO] [stdout] --> src/util/macros.rs:66:10 [INFO] [stdout] | [INFO] [stdout] 3 | use bdb::util::Ntoa; [INFO] [stdout] | ^^^^ private module [INFO] [stdout] | [INFO] [stdout] note: the module `util` is defined here [INFO] [stdout] --> /opt/rustwide/workdir/src/lib.rs:34:1 [INFO] [stdout] | [INFO] [stdout] 34 | pub(crate) mod util; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] error[E0599]: no method named `ntoa` found for type `f32` in the current scope [INFO] [stdout] --> src/util/macros.rs:68:12 [INFO] [stdout] | [INFO] [stdout] 5 | assert_eq!(nonzero_float_to_string!(0.0 as f32), ""); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ method not found in `f32` [INFO] [stdout] | [INFO] [stdout] ::: /opt/rustwide/workdir/src/util/fmt.rs:45:8 [INFO] [stdout] | [INFO] [stdout] 45 | fn ntoa(&self) -> ResultType; [INFO] [stdout] | ---- the method is available for `f32` here [INFO] [stdout] | [INFO] [stdout] = help: items from traits can only be used if the trait is in scope [INFO] [stdout] = note: this error originates in the macro `nonzero_float_to_string` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] help: the following trait is implemented but not in scope; perhaps add a `use` for it: [INFO] [stdout] | [INFO] [stdout] 3 | use bdb::util::fmt::Ntoa; [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] error[E0599]: no method named `ntoa` found for type `f32` in the current scope [INFO] [stdout] --> src/util/macros.rs:69:12 [INFO] [stdout] | [INFO] [stdout] 6 | assert_eq!(nonzero_float_to_string!(1.2 as f32), "1.2"); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ method not found in `f32` [INFO] [stdout] | [INFO] [stdout] ::: /opt/rustwide/workdir/src/util/fmt.rs:45:8 [INFO] [stdout] | [INFO] [stdout] 45 | fn ntoa(&self) -> ResultType; [INFO] [stdout] | ---- the method is available for `f32` here [INFO] [stdout] | [INFO] [stdout] = help: items from traits can only be used if the trait is in scope [INFO] [stdout] = note: this error originates in the macro `nonzero_float_to_string` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] help: the following trait is implemented but not in scope; perhaps add a `use` for it: [INFO] [stdout] | [INFO] [stdout] 3 | use bdb::util::fmt::Ntoa; [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] error: aborting due to 3 previous errors [INFO] [stdout] [INFO] [stdout] Some errors have detailed explanations: E0599, E0603. [INFO] [stdout] For more information about an error, try `rustc --explain E0599`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] src/util/macros.rs - util::macros::nonzero_float_to_string (line 64) [INFO] [stdout] src/util/macros.rs - util::macros::nonzero_to_string (line 39) [INFO] [stdout] [INFO] [stdout] test result: FAILED. 9 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out; finished in 12.03s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--doc' [INFO] running `Command { std: "docker" "inspect" "202eae8da72b09fb9cb9ce6b26dc2db03e704a2f5db642619a0c50326f9db91b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "202eae8da72b09fb9cb9ce6b26dc2db03e704a2f5db642619a0c50326f9db91b", kill_on_drop: false }` [INFO] [stdout] 202eae8da72b09fb9cb9ce6b26dc2db03e704a2f5db642619a0c50326f9db91b