[INFO] cloning repository https://github.com/guertinlab/seqOutBias
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/guertinlab/seqOutBias" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 4c3b400376094a6454bda9e25d5334625b216ca7
[INFO] testing guertinlab/seqOutBias against 1.60.0 for beta-1.61-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias" "/workspace/builds/worker-8/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-8/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/guertinlab/seqOutBias on toolchain 1.60.0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/guertinlab/seqOutBias
[INFO] finished tweaking git repo https://github.com/guertinlab/seqOutBias
[INFO] tweaked toml for git repo https://github.com/guertinlab/seqOutBias written to /workspace/builds/worker-8/source/Cargo.toml
[INFO] crate git repo https://github.com/guertinlab/seqOutBias already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded darling_macro v0.12.2
[INFO] [stderr]   Downloaded cbindgen v0.13.2
[INFO] [stderr]   Downloaded docopt v0.6.86
[INFO] [stderr]   Downloaded bincode v0.5.9
[INFO] [stderr]   Downloaded gcc v0.3.45
[INFO] [stderr]   Downloaded escargot v0.2.0
[INFO] [stderr]   Downloaded predicates v0.5.2
[INFO] [stderr]   Downloaded quick-error v1.2.0
[INFO] [stderr]   Downloaded syn v1.0.68
[INFO] [stderr]   Downloaded lazy_static v0.2.6
[INFO] [stderr]   Downloaded fs_extra v1.1.0
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded darling_core v0.12.2
[INFO] [stderr]   Downloaded darling v0.12.2
[INFO] [stderr]   Downloaded itertools v0.6.0
[INFO] [stderr]   Downloaded ieee754 v0.2.2
[INFO] [stderr]   Downloaded miniz-sys v0.1.9
[INFO] [stderr]   Downloaded rust-htslib v0.12.1
[INFO] [stderr]   Downloaded assert_cmd v0.4.0
[INFO] [stderr]   Downloaded flate2 v0.2.18
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] e280885d723b70a5e86d194a519cbd28d9dd97e7c886986f0fdbe1237b20f961
[INFO] running `Command { std: "docker" "start" "-a" "e280885d723b70a5e86d194a519cbd28d9dd97e7c886986f0fdbe1237b20f961", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e280885d723b70a5e86d194a519cbd28d9dd97e7c886986f0fdbe1237b20f961", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e280885d723b70a5e86d194a519cbd28d9dd97e7c886986f0fdbe1237b20f961", kill_on_drop: false }`
[INFO] [stdout] e280885d723b70a5e86d194a519cbd28d9dd97e7c886986f0fdbe1237b20f961
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 0c1f093db13099c13af6cae5da9741d93703129f10bf5e5e50011d395d5d6c27
[INFO] running `Command { std: "docker" "start" "-a" "0c1f093db13099c13af6cae5da9741d93703129f10bf5e5e50011d395d5d6c27", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.92
[INFO] [stderr]    Compiling syn v1.0.68
[INFO] [stderr]    Compiling gcc v0.3.45
[INFO] [stderr]    Compiling serde v1.0.125
[INFO] [stderr]    Compiling rust-htslib v0.12.1
[INFO] [stderr]    Compiling lazy_static v0.2.6
[INFO] [stderr]    Compiling either v1.1.0
[INFO] [stderr]    Compiling strsim v0.5.2
[INFO] [stderr]    Compiling serde v0.7.15
[INFO] [stderr]    Compiling ieee754 v0.2.2
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling seqOutBias v1.3.1 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling idna v0.1.2
[INFO] [stderr]    Compiling itertools v0.6.0
[INFO] [stderr]    Compiling miniz-sys v0.1.9
[INFO] [stderr]    Compiling url v1.7.2
[INFO] [stderr]    Compiling thread-id v2.0.0
[INFO] [stderr]    Compiling memchr v0.1.11
[INFO] [stderr]    Compiling rand v0.4.3
[INFO] [stderr]    Compiling thread_local v0.2.7
[INFO] [stderr]    Compiling bincode v0.5.9
[INFO] [stderr]    Compiling flate2 v0.2.18
[INFO] [stderr]    Compiling aho-corasick v0.5.3
[INFO] [stderr]    Compiling regex v0.1.80
[INFO] [stderr]    Compiling rand v0.3.22
[INFO] [stderr]    Compiling tempfile v2.2.0
[INFO] [stdout] error: could not find native static library `hts`, perhaps an -L flag is missing?
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to previous error
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `rust-htslib` due to 2 previous errors
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: build failed
[INFO] running `Command { std: "docker" "inspect" "0c1f093db13099c13af6cae5da9741d93703129f10bf5e5e50011d395d5d6c27", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0c1f093db13099c13af6cae5da9741d93703129f10bf5e5e50011d395d5d6c27", kill_on_drop: false }`
[INFO] [stdout] 0c1f093db13099c13af6cae5da9741d93703129f10bf5e5e50011d395d5d6c27