[INFO] cloning repository https://github.com/TianyiShi2001/rust-bio-edu
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/TianyiShi2001/rust-bio-edu" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTianyiShi2001%2Frust-bio-edu", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTianyiShi2001%2Frust-bio-edu'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 536024de8524eb19c08b4381de4f4f2152616c94
[INFO] testing TianyiShi2001/rust-bio-edu against 1.60.0 for beta-1.61-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTianyiShi2001%2Frust-bio-edu" "/workspace/builds/worker-12/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-12/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/TianyiShi2001/rust-bio-edu on toolchain 1.60.0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/TianyiShi2001/rust-bio-edu
[INFO] finished tweaking git repo https://github.com/TianyiShi2001/rust-bio-edu
[INFO] tweaked toml for git repo https://github.com/TianyiShi2001/rust-bio-edu written to /workspace/builds/worker-12/source/Cargo.toml
[INFO] crate git repo https://github.com/TianyiShi2001/rust-bio-edu already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.60.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded nalgebra v0.22.0
[INFO] [stderr]   Downloaded simba v0.2.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] f2c57d083f11206f5c14bd2eb365cb2fd532ca6f1473ccd5be52113f02c0186d
[INFO] running `Command { std: "docker" "start" "-a" "f2c57d083f11206f5c14bd2eb365cb2fd532ca6f1473ccd5be52113f02c0186d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f2c57d083f11206f5c14bd2eb365cb2fd532ca6f1473ccd5be52113f02c0186d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f2c57d083f11206f5c14bd2eb365cb2fd532ca6f1473ccd5be52113f02c0186d", kill_on_drop: false }`
[INFO] [stdout] f2c57d083f11206f5c14bd2eb365cb2fd532ca6f1473ccd5be52113f02c0186d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] df84695e92f5404fd5d71d22482d96f9363d91a621475285674d5e0bac7b4282
[INFO] running `Command { std: "docker" "start" "-a" "df84695e92f5404fd5d71d22482d96f9363d91a621475285674d5e0bac7b4282", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.77
[INFO] [stderr]    Compiling getrandom v0.1.15
[INFO] [stderr]    Compiling rayon-core v1.8.1
[INFO] [stderr]    Compiling ppv-lite86 v0.2.9
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling either v1.6.0
[INFO] [stderr]    Compiling num-traits v0.2.12
[INFO] [stderr]    Compiling crossbeam-utils v0.7.2
[INFO] [stderr]    Compiling memoffset v0.5.5
[INFO] [stderr]    Compiling crossbeam-epoch v0.8.2
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling num-integer v0.1.43
[INFO] [stderr]    Compiling num-rational v0.2.4
[INFO] [stderr]    Compiling rayon v1.4.1
[INFO] [stderr]    Compiling maybe-uninit v2.0.0
[INFO] [stderr]    Compiling paste-impl v0.1.18
[INFO] [stderr]    Compiling typenum v1.12.0
[INFO] [stderr]    Compiling matrixmultiply v0.2.3
[INFO] [stderr]    Compiling paste v0.1.18
[INFO] [stderr]    Compiling generic-array v0.13.2
[INFO] [stderr]    Compiling num_cpus v1.13.0
[INFO] [stderr]    Compiling rand_core v0.5.1
[INFO] [stderr]    Compiling crossbeam-channel v0.4.4
[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling approx v0.3.2
[INFO] [stderr]    Compiling crossbeam-deque v0.7.3
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling simba v0.2.0
[INFO] [stderr]    Compiling rand_distr v0.2.2
[INFO] [stderr]    Compiling nalgebra v0.22.0
[INFO] [stderr]    Compiling bio-edu v0.0.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 19.08s
[INFO] running `Command { std: "docker" "inspect" "df84695e92f5404fd5d71d22482d96f9363d91a621475285674d5e0bac7b4282", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "df84695e92f5404fd5d71d22482d96f9363d91a621475285674d5e0bac7b4282", kill_on_drop: false }`
[INFO] [stdout] df84695e92f5404fd5d71d22482d96f9363d91a621475285674d5e0bac7b4282
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c72e141c23d1fdba99134c0e3362072b3febeaff2f5b28a13ceb828f678b5aeb
[INFO] running `Command { std: "docker" "start" "-a" "c72e141c23d1fdba99134c0e3362072b3febeaff2f5b28a13ceb828f678b5aeb", kill_on_drop: false }`
[INFO] [stderr]    Compiling cargo-husky v1.5.0
[INFO] [stderr]    Compiling bio-edu v0.0.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 1.48s
[INFO] running `Command { std: "docker" "inspect" "c72e141c23d1fdba99134c0e3362072b3febeaff2f5b28a13ceb828f678b5aeb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c72e141c23d1fdba99134c0e3362072b3febeaff2f5b28a13ceb828f678b5aeb", kill_on_drop: false }`
[INFO] [stdout] c72e141c23d1fdba99134c0e3362072b3febeaff2f5b28a13ceb828f678b5aeb
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0c94ce3c1162fcb8e57cac5b65ec2f72eabb1eebea4fcc35e269e823f681646" "/opt/rustwide/cargo-home/bin/cargo" "+1.60.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] b9a4130e62490fa62f190884a02a2e278526f3e95cb1763619857418cc392b1f
[INFO] running `Command { std: "docker" "start" "-a" "b9a4130e62490fa62f190884a02a2e278526f3e95cb1763619857418cc392b1f", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.04s
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/bio_edu-c1de6ad11d120b09)
[INFO] [stdout] 
[INFO] [stdout] running 4 tests
[INFO] [stdout] test alignment::scores::blosum62::tests::test_blosum62 ... ok
[INFO] [stdout] test utils::matrix::tests::test_matrix_fill ... ok
[INFO] [stdout] test utils::matrix::tests::test_matrix_get ... ok
[INFO] [stdout] test utils::matrix::tests::test_matrix_set ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests bio-edu
[INFO] [stdout] 
[INFO] [stdout] running 4 tests
[INFO] [stdout] test src/alignment/pairwise/myers_miller.rs - alignment::pairwise::myers_miller::Aligner<F>::find_dual_semiglobal_score_and_termini (line 595) ... ignored
[INFO] [stdout] test src/alignment/pairwise/myers_miller.rs - alignment::pairwise::myers_miller::Aligner<F>::find_dual_semiglobal_score_and_termini (line 600) ... ignored
[INFO] [stdout] test src/alignment/pairwise/needleman_wunsch_2.rs - alignment::pairwise::needleman_wunsch_2 (line 42) ... ignored
[INFO] [stdout] test src/alignment/pairwise/needleman_wunsch_2.rs - alignment::pairwise::needleman_wunsch_2 (line 76) ... ignored
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 4 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "b9a4130e62490fa62f190884a02a2e278526f3e95cb1763619857418cc392b1f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b9a4130e62490fa62f190884a02a2e278526f3e95cb1763619857418cc392b1f", kill_on_drop: false }`
[INFO] [stdout] b9a4130e62490fa62f190884a02a2e278526f3e95cb1763619857418cc392b1f