[INFO] fetching crate rna-algos 0.1.28... [INFO] testing rna-algos-0.1.28 against beta-2022-02-22 for beta-1.60-1 [INFO] extracting crate rna-algos 0.1.28 into /workspace/builds/worker-77/source [INFO] validating manifest of crates.io crate rna-algos 0.1.28 on toolchain beta-2022-02-22 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate rna-algos 0.1.28 [INFO] finished tweaking crates.io crate rna-algos 0.1.28 [INFO] tweaked toml for crates.io crate rna-algos 0.1.28 written to /workspace/builds/worker-77/source/Cargo.toml [INFO] crate crates.io crate rna-algos 0.1.28 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded num-bigint v0.3.3 [INFO] [stderr] Downloaded hashbrown v0.3.1 [INFO] [stderr] Downloaded bio-seq-algos v0.1.17 [INFO] [stderr] Downloaded rna-ss-params v0.1.21 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 80e11974dc1e2a803935e664baed6320a11a9e9108fa219bc0e3f506d8368d30 [INFO] running `Command { std: "docker" "start" "-a" "80e11974dc1e2a803935e664baed6320a11a9e9108fa219bc0e3f506d8368d30", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "80e11974dc1e2a803935e664baed6320a11a9e9108fa219bc0e3f506d8368d30", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "80e11974dc1e2a803935e664baed6320a11a9e9108fa219bc0e3f506d8368d30", kill_on_drop: false }` [INFO] [stdout] 80e11974dc1e2a803935e664baed6320a11a9e9108fa219bc0e3f506d8368d30 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 02c68559d24252e8e857edd5f5f82028a7e93a51c58f10dc0352152f8516b5fa [INFO] running `Command { std: "docker" "start" "-a" "02c68559d24252e8e857edd5f5f82028a7e93a51c58f10dc0352152f8516b5fa", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling autocfg v1.1.0 [INFO] [stderr] Compiling proc-macro2 v1.0.36 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling syn v1.0.86 [INFO] [stderr] Compiling serde_derive v1.0.136 [INFO] [stderr] Compiling serde v1.0.136 [INFO] [stderr] Compiling memchr v2.4.1 [INFO] [stderr] Compiling libc v0.2.117 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling rawpointer v0.1.0 [INFO] [stderr] Compiling ucd-util v0.1.8 [INFO] [stderr] Compiling regex v0.2.11 [INFO] [stderr] Compiling void v1.0.2 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling ndarray v0.9.1 [INFO] [stderr] Compiling bv v0.7.4 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling utf8-ranges v1.0.4 [INFO] [stderr] Compiling ryu v1.0.9 [INFO] [stderr] Compiling bit-vec v0.4.4 [INFO] [stderr] Compiling hashbrown v0.3.1 [INFO] [stderr] Compiling byteorder v1.4.3 [INFO] [stderr] Compiling unicode-width v0.1.9 [INFO] [stderr] Compiling lazy_static v0.1.16 [INFO] [stderr] Compiling lazy_static v0.2.11 [INFO] [stderr] Compiling bytecount v0.3.2 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling approx v0.1.1 [INFO] [stderr] Compiling scoped_threadpool v0.1.9 [INFO] [stderr] Compiling unreachable v1.0.0 [INFO] [stderr] Compiling getopts v0.2.21 [INFO] [stderr] Compiling regex-syntax v0.5.6 [INFO] [stderr] Compiling itertools v0.6.5 [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Compiling bit-set v0.4.0 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-bigint v0.3.3 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling aho-corasick v0.6.10 [INFO] [stderr] Compiling time v0.1.44 [INFO] [stderr] Compiling num_cpus v1.13.1 [INFO] [stderr] Compiling quote v1.0.15 [INFO] [stderr] Compiling bio-seq-algos v0.1.17 [INFO] [stderr] Compiling rna-ss-params v0.1.21 [INFO] [stderr] Compiling num-traits v0.1.43 [INFO] [stderr] Compiling num-complex v0.1.43 [INFO] [stderr] Compiling num-complex v0.3.1 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling ordered-float v0.5.2 [INFO] [stderr] Compiling num v0.3.1 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling multimap v0.4.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling bio v0.20.3 [INFO] [stderr] Compiling rna-algos v0.1.28 (/opt/rustwide/workdir) [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/bin/centroid_estimator.rs:25:72 [INFO] [stdout] | [INFO] [stdout] 25 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 25 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | +++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/bin/mccaskill.rs:18:72 [INFO] [stdout] | [INFO] [stdout] 18 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 18 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | +++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 30.19s [INFO] running `Command { std: "docker" "inspect" "02c68559d24252e8e857edd5f5f82028a7e93a51c58f10dc0352152f8516b5fa", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "02c68559d24252e8e857edd5f5f82028a7e93a51c58f10dc0352152f8516b5fa", kill_on_drop: false }` [INFO] [stdout] 02c68559d24252e8e857edd5f5f82028a7e93a51c58f10dc0352152f8516b5fa [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] c218af57384189e42fd9802cbeda3dcaaa5feb9ae361db55a00ec3ba7fd2acfa [INFO] running `Command { std: "docker" "start" "-a" "c218af57384189e42fd9802cbeda3dcaaa5feb9ae361db55a00ec3ba7fd2acfa", kill_on_drop: false }` [INFO] [stderr] Compiling rna-algos v0.1.28 (/opt/rustwide/workdir) [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/bin/centroid_estimator.rs:25:72 [INFO] [stdout] | [INFO] [stdout] 25 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 25 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | +++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/bin/mccaskill.rs:18:72 [INFO] [stdout] | [INFO] [stdout] 18 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 18 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | +++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/bin/centroid_estimator.rs:25:72 [INFO] [stdout] | [INFO] [stdout] 25 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 25 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | +++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0463]: can't find crate for `lazy_static` [INFO] [stdout] --> tests/tests.rs:3:1 [INFO] [stdout] | [INFO] [stdout] 3 | extern crate lazy_static; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ can't find crate [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/bin/mccaskill.rs:18:72 [INFO] [stdout] | [INFO] [stdout] 18 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 18 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | +++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: cannot find macro `lazy_static` in this scope [INFO] [stdout] --> tests/tests.rs:10:1 [INFO] [stdout] | [INFO] [stdout] 10 | lazy_static! { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] note: `lazy_static` is imported here, but it is an unresolved item, not a macro [INFO] [stdout] --> tests/tests.rs:3:1 [INFO] [stdout] | [INFO] [stdout] 3 | extern crate lazy_static; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0425]: cannot find value `TEST_SEQ` in this scope [INFO] [stdout] --> tests/tests.rs:20:34 [INFO] [stdout] | [INFO] [stdout] 20 | let _ = mccaskill_algo::(&TEST_SEQ[..], false); [INFO] [stdout] | ^^^^^^^^ not found in this scope [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0425]: cannot find value `TEST_SEQ` in this scope [INFO] [stdout] --> tests/tests.rs:24:34 [INFO] [stdout] | [INFO] [stdout] 24 | let _ = mccaskill_algo::(&TEST_SEQ[..], true); [INFO] [stdout] | ^^^^^^^^ not found in this scope [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rna_algos::utils::*` [INFO] [stdout] --> tests/tests.rs:6:5 [INFO] [stdout] | [INFO] [stdout] 6 | use rna_algos::utils::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 4 previous errors; 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] Some errors have detailed explanations: E0425, E0463. [INFO] [stdout] [INFO] [stdout] For more information about an error, try `rustc --explain E0425`. [INFO] [stdout] [INFO] [stderr] error: could not compile `rna-algos` due to 5 previous errors; 1 warning emitted [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "c218af57384189e42fd9802cbeda3dcaaa5feb9ae361db55a00ec3ba7fd2acfa", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c218af57384189e42fd9802cbeda3dcaaa5feb9ae361db55a00ec3ba7fd2acfa", kill_on_drop: false }` [INFO] [stdout] c218af57384189e42fd9802cbeda3dcaaa5feb9ae361db55a00ec3ba7fd2acfa