[INFO] fetching crate noodles-vcf 0.14.0... [INFO] testing noodles-vcf-0.14.0 against beta-2022-02-22 for beta-1.60-1 [INFO] extracting crate noodles-vcf 0.14.0 into /workspace/builds/worker-11/source [INFO] validating manifest of crates.io crate noodles-vcf 0.14.0 on toolchain beta-2022-02-22 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate noodles-vcf 0.14.0 [INFO] finished tweaking crates.io crate noodles-vcf 0.14.0 [INFO] tweaked toml for crates.io crate noodles-vcf 0.14.0 written to /workspace/builds/worker-11/source/Cargo.toml [INFO] crate crates.io crate noodles-vcf 0.14.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles-core v0.4.0 [INFO] [stderr] Downloaded noodles-sam v0.12.0 [INFO] [stderr] Downloaded noodles-bgzf v0.9.0 [INFO] [stderr] Downloaded noodles-csi v0.5.0 [INFO] [stderr] Downloaded noodles-tabix v0.8.0 [INFO] [stderr] Downloaded tokio-util v0.7.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 61a6feed266f938aeb81a3a42c6fa76d47c04e8e0ffc0b637583807a51149455 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "61a6feed266f938aeb81a3a42c6fa76d47c04e8e0ffc0b637583807a51149455", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "61a6feed266f938aeb81a3a42c6fa76d47c04e8e0ffc0b637583807a51149455", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "61a6feed266f938aeb81a3a42c6fa76d47c04e8e0ffc0b637583807a51149455", kill_on_drop: false }` [INFO] [stdout] 61a6feed266f938aeb81a3a42c6fa76d47c04e8e0ffc0b637583807a51149455 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] e8711b9efdf0261ee2189010b24cba14afb639c6b8e1678d185b4a9c2cc94a34 [INFO] running `Command { std: "docker" "start" "-a" "e8711b9efdf0261ee2189010b24cba14afb639c6b8e1678d185b4a9c2cc94a34", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.118 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling flate2 v1.0.22 [INFO] [stderr] Compiling noodles-bgzf v0.9.0 [INFO] [stderr] Compiling noodles-csi v0.5.0 [INFO] [stderr] Compiling noodles-sam v0.12.0 [INFO] [stderr] Compiling noodles-tabix v0.8.0 [INFO] [stderr] Compiling noodles-core v0.4.0 [INFO] [stderr] Compiling noodles-vcf v0.14.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 15.02s [INFO] running `Command { std: "docker" "inspect" "e8711b9efdf0261ee2189010b24cba14afb639c6b8e1678d185b4a9c2cc94a34", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e8711b9efdf0261ee2189010b24cba14afb639c6b8e1678d185b4a9c2cc94a34", kill_on_drop: false }` [INFO] [stdout] e8711b9efdf0261ee2189010b24cba14afb639c6b8e1678d185b4a9c2cc94a34 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 1c026f62b261948697b6f3cb3e088af0545f61bd46ffdb46ca42bf42b9dab9f3 [INFO] running `Command { std: "docker" "start" "-a" "1c026f62b261948697b6f3cb3e088af0545f61bd46ffdb46ca42bf42b9dab9f3", kill_on_drop: false }` [INFO] [stderr] Compiling num_cpus v1.13.1 [INFO] [stderr] Compiling tokio-macros v1.7.0 [INFO] [stderr] Compiling tokio v1.17.0 [INFO] [stderr] Compiling noodles-vcf v0.14.0 (/opt/rustwide/workdir) [INFO] [stdout] error[E0432]: unresolved import `tokio::io::BufReader` [INFO] [stdout] --> examples/vcf_view_async.rs:9:23 [INFO] [stdout] | [INFO] [stdout] 9 | use tokio::{fs::File, io::BufReader}; [INFO] [stdout] | ^^^^^^^^^^^^^ no `BufReader` in `io` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0432]: unresolved import `futures` [INFO] [stdout] --> examples/vcf_view_async.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use futures::TryStreamExt; [INFO] [stdout] | ^^^^^^^ use of undeclared crate or module `futures` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0433]: failed to resolve: could not find `AsyncReader` in `vcf` [INFO] [stdout] --> examples/vcf_view_async.rs:18:19 [INFO] [stdout] | [INFO] [stdout] 18 | .map(vcf::AsyncReader::new)?; [INFO] [stdout] | ^^^^^^^^^^^ could not find `AsyncReader` in `vcf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0432]: unresolved import `futures` [INFO] [stdout] --> examples/vcf_query_async.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use futures::TryStreamExt; [INFO] [stdout] | ^^^^^^^ use of undeclared crate or module `futures` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0433]: failed to resolve: could not find `AsyncReader` in `bgzf` [INFO] [stdout] --> examples/vcf_query_async.rs:24:20 [INFO] [stdout] | [INFO] [stdout] 24 | .map(bgzf::AsyncReader::new) [INFO] [stdout] | ^^^^^^^^^^^ could not find `AsyncReader` in `bgzf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0433]: failed to resolve: could not find `AsyncReader` in `vcf` [INFO] [stdout] --> examples/vcf_query_async.rs:25:19 [INFO] [stdout] | [INFO] [stdout] 25 | .map(vcf::AsyncReader::new)?; [INFO] [stdout] | ^^^^^^^^^^^ could not find `AsyncReader` in `vcf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 3 previous errors [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] Some errors have detailed explanations: E0432, E0433. [INFO] [stdout] [INFO] [stdout] For more information about an error, try `rustc --explain E0432`. [INFO] [stdout] [INFO] [stdout] error[E0433]: failed to resolve: could not find `r#async` in `tabix` [INFO] [stdout] --> examples/vcf_query_async.rs:29:24 [INFO] [stdout] | [INFO] [stdout] 29 | let index = tabix::r#async::read(src.with_extension("gz.tbi")).await?; [INFO] [stdout] | ^^^^^^^ could not find `r#async` in `tabix` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 4 previous errors [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] Some errors have detailed explanations: E0432, E0433. [INFO] [stdout] [INFO] [stdout] For more information about an error, try `rustc --explain E0432`. [INFO] [stdout] [INFO] [stderr] error: could not compile `noodles-vcf` due to 4 previous errors [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stdout] error[E0432]: unresolved import `tokio::io::BufReader` [INFO] [stdout] --> examples/vcf_read_header_async.rs:13:16 [INFO] [stdout] | [INFO] [stdout] 13 | io::{self, BufReader}, [INFO] [stdout] | ^^^^^^^^^ no `BufReader` in `io` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0433]: failed to resolve: could not find `AsyncReader` in `vcf` [INFO] [stdout] --> examples/vcf_read_header_async.rs:23:19 [INFO] [stdout] | [INFO] [stdout] 23 | .map(vcf::AsyncReader::new)?; [INFO] [stdout] | ^^^^^^^^^^^ could not find `AsyncReader` in `vcf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0432]: unresolved import `tokio::io::BufReader` [INFO] [stdout] --> examples/vcf_reheader_async.rs:13:16 [INFO] [stdout] | [INFO] [stdout] 13 | io::{self, BufReader}, [INFO] [stdout] | ^^^^^^^^^ no `BufReader` in `io` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0432]: unresolved import `futures` [INFO] [stdout] --> examples/vcf_reheader_async.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use futures::TryStreamExt; [INFO] [stdout] | ^^^^^^^ use of undeclared crate or module `futures` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0433]: failed to resolve: could not find `AsyncReader` in `vcf` [INFO] [stdout] --> examples/vcf_reheader_async.rs:35:19 [INFO] [stdout] | [INFO] [stdout] 35 | .map(vcf::AsyncReader::new)?; [INFO] [stdout] | ^^^^^^^^^^^ could not find `AsyncReader` in `vcf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 2 previous errors [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] Some errors have detailed explanations: E0432, E0433. [INFO] [stdout] [INFO] [stdout] For more information about an error, try `rustc --explain E0432`. [INFO] [stdout] [INFO] [stdout] error[E0433]: failed to resolve: could not find `AsyncWriter` in `vcf` [INFO] [stdout] --> examples/vcf_reheader_async.rs:40:27 [INFO] [stdout] | [INFO] [stdout] 40 | let mut writer = vcf::AsyncWriter::new(io::stdout()); [INFO] [stdout] | ^^^^^^^^^^^ could not find `AsyncWriter` in `vcf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0432]: unresolved import `tokio::io::BufReader` [INFO] [stdout] --> examples/vcf_count_async.rs:9:23 [INFO] [stdout] | [INFO] [stdout] 9 | use tokio::{fs::File, io::BufReader}; [INFO] [stdout] | ^^^^^^^^^^^^^ no `BufReader` in `io` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0432]: unresolved import `futures` [INFO] [stdout] --> examples/vcf_count_async.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use futures::TryStreamExt; [INFO] [stdout] | ^^^^^^^ use of undeclared crate or module `futures` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0433]: failed to resolve: could not find `AsyncReader` in `vcf` [INFO] [stdout] --> examples/vcf_count_async.rs:18:19 [INFO] [stdout] | [INFO] [stdout] 18 | .map(vcf::AsyncReader::new)?; [INFO] [stdout] | ^^^^^^^^^^^ could not find `AsyncReader` in `vcf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 4 previous errors [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] Some errors have detailed explanations: E0432, E0433. [INFO] [stdout] [INFO] [stdout] For more information about an error, try `rustc --explain E0432`. [INFO] [stdout] [INFO] [stdout] error: aborting due to 3 previous errors [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] Some errors have detailed explanations: E0432, E0433. [INFO] [stdout] [INFO] [stdout] For more information about an error, try `rustc --explain E0432`. [INFO] [stdout] [INFO] [stdout] error[E0433]: failed to resolve: could not find `AsyncWriter` in `vcf` [INFO] [stdout] --> examples/vcf_write_async.rs:12:27 [INFO] [stdout] | [INFO] [stdout] 12 | let mut writer = vcf::AsyncWriter::new(io::stdout()); [INFO] [stdout] | ^^^^^^^^^^^ could not find `AsyncWriter` in `vcf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0433`. [INFO] [stdout] [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "1c026f62b261948697b6f3cb3e088af0545f61bd46ffdb46ca42bf42b9dab9f3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1c026f62b261948697b6f3cb3e088af0545f61bd46ffdb46ca42bf42b9dab9f3", kill_on_drop: false }` [INFO] [stdout] 1c026f62b261948697b6f3cb3e088af0545f61bd46ffdb46ca42bf42b9dab9f3