[INFO] fetching crate libhmmer-sys 0.2.0...
[INFO] testing libhmmer-sys-0.2.0 against beta-2022-02-22 for beta-1.60-1
[INFO] extracting crate libhmmer-sys 0.2.0 into /workspace/builds/worker-0/source
[INFO] validating manifest of crates.io crate libhmmer-sys 0.2.0 on toolchain beta-2022-02-22
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate libhmmer-sys 0.2.0
[INFO] finished tweaking crates.io crate libhmmer-sys 0.2.0
[INFO] tweaked toml for crates.io crate libhmmer-sys 0.2.0 written to /workspace/builds/worker-0/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d070154f0394d36a0ee19aa9fb80c5766148b859dc3943727f953ae7928c620e
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "d070154f0394d36a0ee19aa9fb80c5766148b859dc3943727f953ae7928c620e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d070154f0394d36a0ee19aa9fb80c5766148b859dc3943727f953ae7928c620e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d070154f0394d36a0ee19aa9fb80c5766148b859dc3943727f953ae7928c620e", kill_on_drop: false }`
[INFO] [stdout] d070154f0394d36a0ee19aa9fb80c5766148b859dc3943727f953ae7928c620e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3433b3b9be998c6d94d8a54f11f4fa450c2eb83c1fe2277446c1f29a859c98d8
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "3433b3b9be998c6d94d8a54f11f4fa450c2eb83c1fe2277446c1f29a859c98d8", kill_on_drop: false }`
[INFO] [stderr]    Compiling libhmmer-sys v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1m 07s
[INFO] running `Command { std: "docker" "inspect" "3433b3b9be998c6d94d8a54f11f4fa450c2eb83c1fe2277446c1f29a859c98d8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3433b3b9be998c6d94d8a54f11f4fa450c2eb83c1fe2277446c1f29a859c98d8", kill_on_drop: false }`
[INFO] [stdout] 3433b3b9be998c6d94d8a54f11f4fa450c2eb83c1fe2277446c1f29a859c98d8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b63a14a95f9066aac3f7cc0acce346513538257ab49cd2afca3eb9e391b15e02
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "b63a14a95f9066aac3f7cc0acce346513538257ab49cd2afca3eb9e391b15e02", kill_on_drop: false }`
[INFO] [stderr]    Compiling libhmmer-sys v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 3.79s
[INFO] running `Command { std: "docker" "inspect" "b63a14a95f9066aac3f7cc0acce346513538257ab49cd2afca3eb9e391b15e02", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b63a14a95f9066aac3f7cc0acce346513538257ab49cd2afca3eb9e391b15e02", kill_on_drop: false }`
[INFO] [stdout] b63a14a95f9066aac3f7cc0acce346513538257ab49cd2afca3eb9e391b15e02
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] ab98dd77044af559772be6d229bd151e7b060f293fc74ea1973530ef134c2e83
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "ab98dd77044af559772be6d229bd151e7b060f293fc74ea1973530ef134c2e83", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.06s
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/libhmmer_sys-e3843ac081b28090)
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests libhmmer-sys
[INFO] [stdout] running 67 tests
[INFO] [stdout] test bindgen_test_layout_ESL_BUFFER ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_KEYHASH ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MIXDCHLET ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MSA ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_ALPHABET ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MSAFILE_FMTDATA ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_NEWSSI ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_OPTIONS ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_PERMUTATION ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_PKEY ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SKEY ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_RAND64 ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_GETOPTS ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_DMATRIX ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_HMM ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_BITFIELD ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_HMX ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_RANDOMNESS ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SCOREMATRIX ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_FILEPARSER ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_HISTOGRAM ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MSAFILE ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SQDATA ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SQ_BLOCK ... ok
[INFO] [stdout] test bindgen_test_layout_P7_OM_BLOCK ... ok
[INFO] [stdout] test bindgen_test_layout__IO_FILE ... ok
[INFO] [stdout] test bindgen_test_layout___pthread_internal_list ... ok
[INFO] [stdout] test bindgen_test_layout_fm_ambiglist_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_data_s ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqcache_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_interval_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_metadata_s ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SQ ... ok
[INFO] [stdout] test bindgen_test_layout_fm_seqdata_s ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqncbi_vol_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_dom_s ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqncbi_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_alidisplay_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_bg_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_builder_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmm_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmm_window_list_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmm_window_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmmfile_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hit_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_omx_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_oprofile_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_gmx_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_domaindef_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_pipeline_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_prior_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_profile_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_scoredata_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_scoredata_s__bindgen_ty_1 ... ok
[INFO] [stdout] test bindgen_test_layout_p7_spcoord_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_spensemble_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_tophits_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_trace_s ... ok
[INFO] [stdout] test bindgen_test_layout_pthread_mutex_t ... ok
[INFO] [stdout] test bindgen_test_layout_tms ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SSI ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_STOPWATCH ... ok
[INFO] [stdout] test bindgen_test_layout___va_list_tag ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqascii_s ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqio_s ... ok
[INFO] [stdout] test bindgen_test_layout___pthread_mutex_s ... ok
[INFO] [stdout] test bindgen_test_layout_FM_CFG ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 67 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "ab98dd77044af559772be6d229bd151e7b060f293fc74ea1973530ef134c2e83", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ab98dd77044af559772be6d229bd151e7b060f293fc74ea1973530ef134c2e83", kill_on_drop: false }`
[INFO] [stdout] ab98dd77044af559772be6d229bd151e7b060f293fc74ea1973530ef134c2e83