[INFO] fetching crate genomic_interval_pipeline 0.1.3... [INFO] testing genomic_interval_pipeline-0.1.3 against beta-2022-02-22 for beta-1.60-1 [INFO] extracting crate genomic_interval_pipeline 0.1.3 into /workspace/builds/worker-22/source [INFO] validating manifest of crates.io crate genomic_interval_pipeline 0.1.3 on toolchain beta-2022-02-22 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate genomic_interval_pipeline 0.1.3 [INFO] finished tweaking crates.io crate genomic_interval_pipeline 0.1.3 [INFO] tweaked toml for crates.io crate genomic_interval_pipeline 0.1.3 written to /workspace/builds/worker-22/source/Cargo.toml [INFO] crate crates.io crate genomic_interval_pipeline 0.1.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded libloading v0.6.5 [INFO] [stderr] Downloaded theban_interval_tree v0.7.1 [INFO] [stderr] Downloaded rust-htslib v0.35.2 [INFO] [stderr] Downloaded hdf5-types v0.7.0 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded bio-types v0.7.0 [INFO] [stderr] Downloaded matrixmultiply v0.2.3 [INFO] [stderr] Downloaded hdf5-sys v0.7.0 [INFO] [stderr] Downloaded smallvec v1.5.0 [INFO] [stderr] Downloaded pbr v1.0.3 [INFO] [stderr] Downloaded hdf5-derive v0.7.0 [INFO] [stderr] Downloaded derefable v0.1.0 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded hdf5 v0.7.0 [INFO] [stderr] Downloaded memrange v0.1.3 [INFO] [stderr] Downloaded hts-sys v1.11.1-fix1 [INFO] [stderr] Downloaded curl-sys v0.4.38+curl-7.73.0 [INFO] [stderr] Downloaded openssl-src v111.12.0+1.1.1h [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-22/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-22/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] e762ba3a09f9997eaf18935acb4204d4e7205fcd4da4d4ec8a5eca439cf47954 [INFO] running `Command { std: "docker" "start" "-a" "e762ba3a09f9997eaf18935acb4204d4e7205fcd4da4d4ec8a5eca439cf47954", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "e762ba3a09f9997eaf18935acb4204d4e7205fcd4da4d4ec8a5eca439cf47954", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e762ba3a09f9997eaf18935acb4204d4e7205fcd4da4d4ec8a5eca439cf47954", kill_on_drop: false }` [INFO] [stdout] e762ba3a09f9997eaf18935acb4204d4e7205fcd4da4d4ec8a5eca439cf47954 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-22/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-22/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f9ea7996c666c5f487e2af2ec7c156e8297f40d8d8f49128d6676ea40e4fd5ef [INFO] running `Command { std: "docker" "start" "-a" "f9ea7996c666c5f487e2af2ec7c156e8297f40d8d8f49128d6676ea40e4fd5ef", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.80 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling syn v1.0.50 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling regex-syntax v0.6.21 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling serde v1.0.117 [INFO] [stderr] Compiling serde_derive v1.0.117 [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling smallvec v1.5.0 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling unicode-segmentation v1.7.0 [INFO] [stderr] Compiling rustc-serialize v0.3.24 [INFO] [stderr] Compiling hdf5 v0.7.0 [INFO] [stderr] Compiling adler v0.2.3 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling ascii v1.0.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling libloading v0.6.5 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling tinyvec v1.1.0 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling miniz_oxide v0.4.3 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling derefable v0.1.0 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling aho-corasick v0.7.15 [INFO] [stderr] Compiling jobserver v0.1.21 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling rand v0.4.6 [INFO] [stderr] Compiling parking_lot_core v0.7.2 [INFO] [stderr] Compiling time v0.1.44 [INFO] [stderr] Compiling hdf5-types v0.7.0 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling unicode-normalization v0.1.16 [INFO] [stderr] Compiling cc v1.0.65 [INFO] [stderr] Compiling flate2 v1.0.19 [INFO] [stderr] Compiling parking_lot v0.10.2 [INFO] [stderr] Compiling rand v0.3.23 [INFO] [stderr] Compiling memrange v0.1.3 [INFO] [stderr] Compiling theban_interval_tree v0.7.1 [INFO] [stderr] Compiling crossbeam-channel v0.4.4 [INFO] [stderr] Compiling openssl-src v111.12.0+1.1.1h [INFO] [stderr] Compiling regex v1.4.2 [INFO] [stderr] Compiling idna v0.2.0 [INFO] [stderr] Compiling pbr v1.0.3 [INFO] [stderr] Compiling openssl-sys v0.9.58 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling curl-sys v0.4.38+curl-7.73.0 [INFO] [stderr] Compiling bzip2-sys v0.1.9+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling hts-sys v1.11.1-fix1 [INFO] [stderr] Compiling url v2.2.0 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling thiserror-impl v1.0.22 [INFO] [stderr] Compiling hdf5-derive v0.7.0 [INFO] [stderr] Compiling structopt-derive v0.4.13 [INFO] [stderr] Compiling thiserror v1.0.22 [INFO] [stderr] Compiling structopt v0.3.20 [INFO] [stderr] Compiling bio-types v0.7.0 [INFO] [stderr] Compiling rust-htslib v0.35.2 [INFO] [stderr] Compiling genomic_interval_pipeline v0.1.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 29.82s [INFO] running `Command { std: "docker" "inspect" "f9ea7996c666c5f487e2af2ec7c156e8297f40d8d8f49128d6676ea40e4fd5ef", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f9ea7996c666c5f487e2af2ec7c156e8297f40d8d8f49128d6676ea40e4fd5ef", kill_on_drop: false }` [INFO] [stdout] f9ea7996c666c5f487e2af2ec7c156e8297f40d8d8f49128d6676ea40e4fd5ef [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-22/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-22/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3f54e21ca2c0a5bef9d7f362554cf3b4dfcfff9144ac46ed33e000263cf080af [INFO] running `Command { std: "docker" "start" "-a" "3f54e21ca2c0a5bef9d7f362554cf3b4dfcfff9144ac46ed33e000263cf080af", kill_on_drop: false }` [INFO] [stderr] Compiling genomic_interval_pipeline v0.1.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.88s [INFO] running `Command { std: "docker" "inspect" "3f54e21ca2c0a5bef9d7f362554cf3b4dfcfff9144ac46ed33e000263cf080af", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3f54e21ca2c0a5bef9d7f362554cf3b4dfcfff9144ac46ed33e000263cf080af", kill_on_drop: false }` [INFO] [stdout] 3f54e21ca2c0a5bef9d7f362554cf3b4dfcfff9144ac46ed33e000263cf080af [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-22/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-22/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 86b03df6c43d89f01227f4f1366fbd56f7a4b5c44085ea3d685d46851d37b968 [INFO] running `Command { std: "docker" "start" "-a" "86b03df6c43d89f01227f4f1366fbd56f7a4b5c44085ea3d685d46851d37b968", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.09s [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/genomic_interval_pipeline-cf050c2cced12f99) [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "86b03df6c43d89f01227f4f1366fbd56f7a4b5c44085ea3d685d46851d37b968", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "86b03df6c43d89f01227f4f1366fbd56f7a4b5c44085ea3d685d46851d37b968", kill_on_drop: false }` [INFO] [stdout] 86b03df6c43d89f01227f4f1366fbd56f7a4b5c44085ea3d685d46851d37b968