[INFO] fetching crate biodiff 1.0.0... [INFO] testing biodiff-1.0.0 against beta-2022-02-22 for beta-1.60-1 [INFO] extracting crate biodiff 1.0.0 into /workspace/builds/worker-0/source [INFO] validating manifest of crates.io crate biodiff 1.0.0 on toolchain beta-2022-02-22 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate biodiff 1.0.0 [INFO] finished tweaking crates.io crate biodiff 1.0.0 [INFO] tweaked toml for crates.io crate biodiff 1.0.0 written to /workspace/builds/worker-0/source/Cargo.toml [INFO] crate crates.io crate biodiff 1.0.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded transpose v0.2.1 [INFO] [stderr] Downloaded statrs v0.15.0 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded bio v0.39.1 [INFO] [stderr] Downloaded bio-types v0.12.1 [INFO] [stderr] Downloaded cursive_buffered_backend v0.6.0 [INFO] [stderr] Downloaded hexagex v0.1.0 [INFO] [stderr] Downloaded realfft v2.0.1 [INFO] [stderr] Downloaded enum-map v2.0.1 [INFO] [stderr] Downloaded enum-map-derive v0.6.0 [INFO] [stderr] Downloaded enum-map-derive v0.8.0 [INFO] [stderr] Downloaded cursive v0.17.0 [INFO] [stderr] Downloaded cursive_core v0.3.1 [INFO] [stderr] Downloaded enum-map v1.1.1 [INFO] [stderr] Downloaded rustfft v6.0.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 82c82ac1cc9cec6fd2a1bfa8e6c571b6b74c13fadc6b4f645519bf43ae12916a [INFO] running `Command { std: "docker" "start" "-a" "82c82ac1cc9cec6fd2a1bfa8e6c571b6b74c13fadc6b4f645519bf43ae12916a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "82c82ac1cc9cec6fd2a1bfa8e6c571b6b74c13fadc6b4f645519bf43ae12916a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "82c82ac1cc9cec6fd2a1bfa8e6c571b6b74c13fadc6b4f645519bf43ae12916a", kill_on_drop: false }` [INFO] [stdout] 82c82ac1cc9cec6fd2a1bfa8e6c571b6b74c13fadc6b4f645519bf43ae12916a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] a315f03cf361d1c5570c885db97790dd610d8402a96e8a332f9b86da9ceaa9b6 [INFO] running `Command { std: "docker" "start" "-a" "a315f03cf361d1c5570c885db97790dd610d8402a96e8a332f9b86da9ceaa9b6", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.117 [INFO] [stderr] Compiling libm v0.2.2 [INFO] [stderr] Compiling ident_case v1.0.1 [INFO] [stderr] Compiling strsim v0.10.0 [INFO] [stderr] Compiling unicode-segmentation v1.9.0 [INFO] [stderr] Compiling rustversion v1.0.6 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling paste v1.0.6 [INFO] [stderr] Compiling stable_deref_trait v1.2.0 [INFO] [stderr] Compiling once_cell v1.9.0 [INFO] [stderr] Compiling anyhow v1.0.53 [INFO] [stderr] Compiling xi-unicode v0.3.0 [INFO] [stderr] Compiling unicode-width v0.1.9 [INFO] [stderr] Compiling strength_reduce v0.2.3 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling fixedbitset v0.4.1 [INFO] [stderr] Compiling serde_json v1.0.78 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling strum v0.23.0 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling bytecount v0.6.2 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-rational v0.4.0 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling ahash v0.7.6 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling serde_derive v1.0.136 [INFO] [stderr] Compiling matrixmultiply v0.3.2 [INFO] [stderr] Compiling enum-map-derive v0.8.0 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling thiserror-impl v1.0.30 [INFO] [stderr] Compiling enum-map-derive v0.6.0 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling hexagex v0.1.0 [INFO] [stderr] Compiling owning_ref v0.4.1 [INFO] [stderr] Compiling darling_core v0.13.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling petgraph v0.6.0 [INFO] [stderr] Compiling bit-set v0.5.2 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling getset v0.1.2 [INFO] [stderr] Compiling getrandom v0.2.4 [INFO] [stderr] Compiling signal-hook-registry v1.4.0 [INFO] [stderr] Compiling mio v0.7.14 [INFO] [stderr] Compiling time v0.3.7 [INFO] [stderr] Compiling parking_lot_core v0.8.5 [INFO] [stderr] Compiling dirs-sys v0.3.6 [INFO] [stderr] Compiling memmap2 v0.5.2 [INFO] [stderr] Compiling num_cpus v1.13.1 [INFO] [stderr] Compiling strum_macros v0.23.1 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling dirs v4.0.0 [INFO] [stderr] Compiling signal-hook v0.3.13 [INFO] [stderr] Compiling parking_lot v0.11.2 [INFO] [stderr] Compiling enum-map v1.1.1 [INFO] [stderr] Compiling enum-map v2.0.1 [INFO] [stderr] Compiling num-complex v0.4.0 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling ordered-float v1.1.1 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling signal-hook-mio v0.2.1 [INFO] [stderr] Compiling crossterm v0.22.1 [INFO] [stderr] Compiling rand v0.8.4 [INFO] [stderr] Compiling transpose v0.2.1 [INFO] [stderr] Compiling primal-check v0.3.1 [INFO] [stderr] Compiling simba v0.5.1 [INFO] [stderr] Compiling rustfft v6.0.1 [INFO] [stderr] Compiling ndarray v0.15.4 [INFO] [stderr] Compiling num v0.4.0 [INFO] [stderr] Compiling thiserror v1.0.30 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling darling_macro v0.13.1 [INFO] [stderr] Compiling bio-types v0.12.1 [INFO] [stderr] Compiling darling v0.13.1 [INFO] [stderr] Compiling enumset_derive v0.5.5 [INFO] [stderr] Compiling serde v1.0.136 [INFO] [stderr] Compiling enumset v1.0.8 [INFO] [stderr] Compiling cursive_core v0.3.1 [INFO] [stderr] Compiling realfft v2.0.1 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling multimap v0.8.3 [INFO] [stderr] Compiling cursive_buffered_backend v0.6.0 [INFO] [stderr] Compiling cursive v0.17.0 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling nalgebra v0.27.1 [INFO] [stderr] Compiling statrs v0.15.0 [INFO] [stderr] Compiling bio v0.39.1 [INFO] [stderr] Compiling biodiff v1.0.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 52.84s [INFO] running `Command { std: "docker" "inspect" "a315f03cf361d1c5570c885db97790dd610d8402a96e8a332f9b86da9ceaa9b6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a315f03cf361d1c5570c885db97790dd610d8402a96e8a332f9b86da9ceaa9b6", kill_on_drop: false }` [INFO] [stdout] a315f03cf361d1c5570c885db97790dd610d8402a96e8a332f9b86da9ceaa9b6 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 261879241d04fac76f47cce338a8dfcdcaa5a3e7c9ae81e616ae072e31ab4faa [INFO] running `Command { std: "docker" "start" "-a" "261879241d04fac76f47cce338a8dfcdcaa5a3e7c9ae81e616ae072e31ab4faa", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling biodiff v1.0.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.70s [INFO] running `Command { std: "docker" "inspect" "261879241d04fac76f47cce338a8dfcdcaa5a3e7c9ae81e616ae072e31ab4faa", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "261879241d04fac76f47cce338a8dfcdcaa5a3e7c9ae81e616ae072e31ab4faa", kill_on_drop: false }` [INFO] [stdout] 261879241d04fac76f47cce338a8dfcdcaa5a3e7c9ae81e616ae072e31ab4faa [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] b5dde104257a2cbc64ee5bcf39aeec94a03b647eddddf53590a87e9aa06436f9 [INFO] running `Command { std: "docker" "start" "-a" "b5dde104257a2cbc64ee5bcf39aeec94a03b647eddddf53590a87e9aa06436f9", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.34s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/biodiff-b5d0c7302424a2dd) [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/git_biodiff-e26ee023d35045ec) [INFO] [stdout] running 4 tests [INFO] [stdout] test datastruct::tests::bsearch ... ok [INFO] [stdout] test datastruct::tests::common_sequence_iter ... ok [INFO] [stdout] test datastruct::tests::doublevec ... ok [INFO] [stdout] test util::tests::ent ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "b5dde104257a2cbc64ee5bcf39aeec94a03b647eddddf53590a87e9aa06436f9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b5dde104257a2cbc64ee5bcf39aeec94a03b647eddddf53590a87e9aa06436f9", kill_on_drop: false }` [INFO] [stdout] b5dde104257a2cbc64ee5bcf39aeec94a03b647eddddf53590a87e9aa06436f9