[INFO] fetching crate alevin-fry 0.5.0... [INFO] testing alevin-fry-0.5.0 against beta-2022-02-22 for beta-1.60-1 [INFO] extracting crate alevin-fry 0.5.0 into /workspace/builds/worker-5/source [INFO] validating manifest of crates.io crate alevin-fry 0.5.0 on toolchain beta-2022-02-22 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate alevin-fry 0.5.0 [INFO] finished tweaking crates.io crate alevin-fry 0.5.0 [INFO] tweaked toml for crates.io crate alevin-fry 0.5.0 written to /workspace/builds/worker-5/source/Cargo.toml [INFO] crate crates.io crate alevin-fry 0.5.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded slog-async v2.7.0 [INFO] [stderr] Downloaded sce v0.1.1 [INFO] [stderr] Downloaded ndarray v0.14.0 [INFO] [stderr] Downloaded needletail v0.4.1 [INFO] [stderr] Downloaded quickersort v3.0.1 [INFO] [stderr] Downloaded mimalloc v0.1.28 [INFO] [stderr] Downloaded sprs v0.10.0 [INFO] [stderr] Downloaded sprs v0.11.0 [INFO] [stderr] Downloaded libradicl v0.4.4 [INFO] [stderr] Downloaded scroll v0.11.0 [INFO] [stderr] Downloaded slog-term v2.8.1 [INFO] [stderr] Downloaded libmimalloc-sys v0.1.24 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] fae519610390971ef69334b66149891bd105a0014bf5e0732eda7e7f35ba056c [INFO] running `Command { std: "docker" "start" "-a" "fae519610390971ef69334b66149891bd105a0014bf5e0732eda7e7f35ba056c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "fae519610390971ef69334b66149891bd105a0014bf5e0732eda7e7f35ba056c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fae519610390971ef69334b66149891bd105a0014bf5e0732eda7e7f35ba056c", kill_on_drop: false }` [INFO] [stdout] fae519610390971ef69334b66149891bd105a0014bf5e0732eda7e7f35ba056c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3f17eb714e18c83d02c466d6626da8fc016e2c00d1c8ee4e0b64a66a334bcb45 [INFO] running `Command { std: "docker" "start" "-a" "3f17eb714e18c83d02c466d6626da8fc016e2c00d1c8ee4e0b64a66a334bcb45", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling libc v0.2.118 [INFO] [stderr] Compiling libm v0.2.2 [INFO] [stderr] Compiling crossbeam-utils v0.8.7 [INFO] [stderr] Compiling crossbeam-epoch v0.9.7 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling crc32fast v1.3.2 [INFO] [stderr] Compiling slog v2.7.0 [INFO] [stderr] Compiling ndarray v0.14.0 [INFO] [stderr] Compiling parking_lot_core v0.9.1 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling nodrop v0.1.14 [INFO] [stderr] Compiling safemem v0.3.3 [INFO] [stderr] Compiling snap v1.0.5 [INFO] [stderr] Compiling arrayvec v0.4.12 [INFO] [stderr] Compiling void v1.0.2 [INFO] [stderr] Compiling slog-async v2.7.0 [INFO] [stderr] Compiling crossbeam-queue v0.3.4 [INFO] [stderr] Compiling bytecount v0.6.2 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling scroll v0.11.0 [INFO] [stderr] Compiling take_mut v0.2.2 [INFO] [stderr] Compiling fixedbitset v0.4.1 [INFO] [stderr] Compiling arrayvec v0.7.2 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-bigint v0.4.3 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-rational v0.4.0 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling matrixmultiply v0.3.2 [INFO] [stderr] Compiling matrixmultiply v0.2.4 [INFO] [stderr] Compiling ahash v0.7.6 [INFO] [stderr] Compiling thread_local v1.1.4 [INFO] [stderr] Compiling os_str_bytes v6.0.0 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling strum_macros v0.23.1 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling serde_json v1.0.79 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling unreachable v1.0.0 [INFO] [stderr] Compiling petgraph v0.6.0 [INFO] [stderr] Compiling buf_redux v0.8.4 [INFO] [stderr] Compiling quickersort v3.0.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling num-format v0.4.0 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling jobserver v0.1.24 [INFO] [stderr] Compiling getrandom v0.2.4 [INFO] [stderr] Compiling num_cpus v1.13.1 [INFO] [stderr] Compiling terminal_size v0.1.17 [INFO] [stderr] Compiling dirs-sys-next v0.1.2 [INFO] [stderr] Compiling time v0.1.44 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling console v0.15.0 [INFO] [stderr] Compiling textwrap v0.14.2 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling dirs-next v2.0.0 [INFO] [stderr] Compiling cc v1.0.72 [INFO] [stderr] Compiling crossbeam-channel v0.5.2 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling term v0.7.0 [INFO] [stderr] Compiling flate2 v1.0.22 [INFO] [stderr] Compiling clap v3.0.14 [INFO] [stderr] Compiling parking_lot v0.12.0 [INFO] [stderr] Compiling indicatif v0.16.2 [INFO] [stderr] Compiling dashmap v5.1.0 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling cmake v0.1.48 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling num-complex v0.4.0 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling num-complex v0.3.1 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling hts-sys v2.0.2 [INFO] [stderr] Compiling libmimalloc-sys v0.1.24 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling alga v0.9.3 [INFO] [stderr] Compiling bio-types v0.12.1 [INFO] [stderr] Compiling chrono v0.4.19 [INFO] [stderr] Compiling ndarray v0.15.4 [INFO] [stderr] Compiling simba v0.5.1 [INFO] [stderr] Compiling bzip2 v0.4.3 [INFO] [stderr] Compiling xz2 v0.1.6 [INFO] [stderr] Compiling mimalloc v0.1.28 [INFO] [stderr] Compiling needletail v0.4.1 [INFO] [stderr] Compiling slog-term v2.8.1 [INFO] [stderr] Compiling num v0.4.0 [INFO] [stderr] Compiling sprs v0.10.0 [INFO] [stderr] Compiling sprs v0.11.0 [INFO] [stderr] Compiling sce v0.1.1 [INFO] [stderr] Compiling nalgebra v0.27.1 [INFO] [stderr] Compiling rust-htslib v0.38.2 [INFO] [stderr] Compiling libradicl v0.4.4 [INFO] [stderr] Compiling statrs v0.15.0 [INFO] [stderr] Compiling alevin-fry v0.5.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 53.36s [INFO] running `Command { std: "docker" "inspect" "3f17eb714e18c83d02c466d6626da8fc016e2c00d1c8ee4e0b64a66a334bcb45", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3f17eb714e18c83d02c466d6626da8fc016e2c00d1c8ee4e0b64a66a334bcb45", kill_on_drop: false }` [INFO] [stdout] 3f17eb714e18c83d02c466d6626da8fc016e2c00d1c8ee4e0b64a66a334bcb45 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 07f5156c9cd1589b777e2b8e244e64f4548a4c6207bdcd3f7d5eb028e2b44903 [INFO] running `Command { std: "docker" "start" "-a" "07f5156c9cd1589b777e2b8e244e64f4548a4c6207bdcd3f7d5eb028e2b44903", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling alevin-fry v0.5.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 4.93s [INFO] running `Command { std: "docker" "inspect" "07f5156c9cd1589b777e2b8e244e64f4548a4c6207bdcd3f7d5eb028e2b44903", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "07f5156c9cd1589b777e2b8e244e64f4548a4c6207bdcd3f7d5eb028e2b44903", kill_on_drop: false }` [INFO] [stdout] 07f5156c9cd1589b777e2b8e244e64f4548a4c6207bdcd3f7d5eb028e2b44903 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] a14582fac3089e2bed142cb01f7b6b23e405a960538e9a8a5dde40565581f0a6 [INFO] running `Command { std: "docker" "start" "-a" "a14582fac3089e2bed142cb01f7b6b23e405a960538e9a8a5dde40565581f0a6", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.15s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/alevin_fry-c88fe965f427e9bd) [INFO] [stdout] [INFO] [stdout] running 6 tests [INFO] [stdout] test utils::tests::test_get_all_indels ... ok [INFO] [stdout] test utils::tests::test_get_all_one_edit_neighbors ... ok [INFO] [stdout] test utils::tests::test_generate_whitelist_hash ... ok [INFO] [stdout] test utils::tests::test_get_all_snps ... ok [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/alevin_fry-b555a31958efd84e) [INFO] [stdout] test utils::tests::test_get_bit_mask ... ok [INFO] [stdout] test utils::tests::test_version_info ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Doc-tests alevin-fry [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "a14582fac3089e2bed142cb01f7b6b23e405a960538e9a8a5dde40565581f0a6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a14582fac3089e2bed142cb01f7b6b23e405a960538e9a8a5dde40565581f0a6", kill_on_drop: false }` [INFO] [stdout] a14582fac3089e2bed142cb01f7b6b23e405a960538e9a8a5dde40565581f0a6