[INFO] cloning repository https://github.com/oicr-gsi/barcodex-rs [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/oicr-gsi/barcodex-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Foicr-gsi%2Fbarcodex-rs", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Foicr-gsi%2Fbarcodex-rs'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 192d1d201dd44715945965621224021ec55e1c43 [INFO] testing oicr-gsi/barcodex-rs against beta-2022-02-22 for beta-1.60-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Foicr-gsi%2Fbarcodex-rs" "/workspace/builds/worker-6/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-6/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/oicr-gsi/barcodex-rs on toolchain beta-2022-02-22 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/oicr-gsi/barcodex-rs [INFO] finished tweaking git repo https://github.com/oicr-gsi/barcodex-rs [INFO] tweaked toml for git repo https://github.com/oicr-gsi/barcodex-rs written to /workspace/builds/worker-6/source/Cargo.toml [INFO] crate git repo https://github.com/oicr-gsi/barcodex-rs already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] a7699008998c1c9b94154bbb3f444cd5d6d28cd18249be62570de530890313ef [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "a7699008998c1c9b94154bbb3f444cd5d6d28cd18249be62570de530890313ef", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a7699008998c1c9b94154bbb3f444cd5d6d28cd18249be62570de530890313ef", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a7699008998c1c9b94154bbb3f444cd5d6d28cd18249be62570de530890313ef", kill_on_drop: false }` [INFO] [stdout] a7699008998c1c9b94154bbb3f444cd5d6d28cd18249be62570de530890313ef [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 4aeea50efc31c517fbf5ff21b9f21c34bafbc70d5922b6f54cc21a7637e1213a [INFO] running `Command { std: "docker" "start" "-a" "4aeea50efc31c517fbf5ff21b9f21c34bafbc70d5922b6f54cc21a7637e1213a", kill_on_drop: false }` [INFO] [stderr] Compiling syn v1.0.36 [INFO] [stderr] Compiling libc v0.2.73 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling ordermap v0.3.5 [INFO] [stderr] Compiling bio v0.31.0 [INFO] [stderr] Compiling fixedbitset v0.1.9 [INFO] [stderr] Compiling os_str_bytes v2.3.1 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling strum v0.18.0 [INFO] [stderr] Compiling bytecount v0.6.0 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling proc-macro-error-attr v0.4.12 [INFO] [stderr] Compiling hashbrown v0.8.1 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling proc-macro-error v0.4.12 [INFO] [stderr] Compiling indexmap v1.5.0 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling petgraph v0.4.13 [INFO] [stderr] Compiling getrandom v0.1.14 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling flate2 v1.0.16 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling ordered-float v1.1.0 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling statrs v0.12.0 [INFO] [stderr] Compiling syn-mid v0.5.0 [INFO] [stderr] Compiling serde_derive v1.0.114 [INFO] [stderr] Compiling snafu-derive v0.6.8 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling strum_macros v0.18.0 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling clap_derive v3.0.0-beta.1 [INFO] [stderr] Compiling snafu v0.6.8 [INFO] [stderr] Compiling serde v1.0.114 [INFO] [stderr] Compiling bstr v0.2.13 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling multimap v0.6.0 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling bio-types v0.7.0 [INFO] [stderr] Compiling serde_json v1.0.57 [INFO] [stderr] Compiling clap v3.0.0-beta.1 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling barcodex-rs v0.1.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 50s [INFO] running `Command { std: "docker" "inspect" "4aeea50efc31c517fbf5ff21b9f21c34bafbc70d5922b6f54cc21a7637e1213a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4aeea50efc31c517fbf5ff21b9f21c34bafbc70d5922b6f54cc21a7637e1213a", kill_on_drop: false }` [INFO] [stdout] 4aeea50efc31c517fbf5ff21b9f21c34bafbc70d5922b6f54cc21a7637e1213a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] bfd38c37bebef5c11a17541d65f57f3fcaeeeea7fdc6479f4d1ac480ca6f0613 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "bfd38c37bebef5c11a17541d65f57f3fcaeeeea7fdc6479f4d1ac480ca6f0613", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling barcodex-rs v0.1.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 5.37s [INFO] running `Command { std: "docker" "inspect" "bfd38c37bebef5c11a17541d65f57f3fcaeeeea7fdc6479f4d1ac480ca6f0613", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bfd38c37bebef5c11a17541d65f57f3fcaeeeea7fdc6479f4d1ac480ca6f0613", kill_on_drop: false }` [INFO] [stdout] bfd38c37bebef5c11a17541d65f57f3fcaeeeea7fdc6479f4d1ac480ca6f0613 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 5b8c1828f30d1811d7c7dd0fa5de0264ab5f5f3b16814f661433a590302e654a [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "5b8c1828f30d1811d7c7dd0fa5de0264ab5f5f3b16814f661433a590302e654a", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.10s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/barcodex_rs-00217c44ab273df4) [INFO] [stdout] [INFO] [stdout] running 6 tests [INFO] [stdout] test tests::test_s0 ... ok [INFO] [stdout] test tests::test_s2 ... ok [INFO] [stdout] test tests::test_i2 ... ok [INFO] [stdout] test tests::test_s1 ... ok [INFO] [stdout] test tests::test_i0 ... ok [INFO] [stdout] test tests::test_i1 ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "5b8c1828f30d1811d7c7dd0fa5de0264ab5f5f3b16814f661433a590302e654a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5b8c1828f30d1811d7c7dd0fa5de0264ab5f5f3b16814f661433a590302e654a", kill_on_drop: false }` [INFO] [stdout] 5b8c1828f30d1811d7c7dd0fa5de0264ab5f5f3b16814f661433a590302e654a