[INFO] cloning repository https://github.com/angelovangel/fastkmers [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/angelovangel/fastkmers" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fangelovangel%2Ffastkmers", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fangelovangel%2Ffastkmers'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 11eb3242f86d3e1fe105731ce3b291e9d3d80c40 [INFO] testing angelovangel/fastkmers against beta-2022-02-22 for beta-1.60-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fangelovangel%2Ffastkmers" "/workspace/builds/worker-90/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-90/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/angelovangel/fastkmers on toolchain beta-2022-02-22 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/angelovangel/fastkmers [INFO] finished tweaking git repo https://github.com/angelovangel/fastkmers [INFO] tweaked toml for git repo https://github.com/angelovangel/fastkmers written to /workspace/builds/worker-90/source/Cargo.toml [INFO] crate git repo https://github.com/angelovangel/fastkmers already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded rand_distr v0.4.2 [INFO] [stderr] Downloaded crc32fast v1.2.2 [INFO] [stderr] Downloaded probminhash v0.1.5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-90/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-90/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 509bb936f1baa45a229bf3dcb62e738299495b40419808c74f384add74caa42a [INFO] running `Command { std: "docker" "start" "-a" "509bb936f1baa45a229bf3dcb62e738299495b40419808c74f384add74caa42a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "509bb936f1baa45a229bf3dcb62e738299495b40419808c74f384add74caa42a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "509bb936f1baa45a229bf3dcb62e738299495b40419808c74f384add74caa42a", kill_on_drop: false }` [INFO] [stdout] 509bb936f1baa45a229bf3dcb62e738299495b40419808c74f384add74caa42a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-90/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-90/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 01adfbf1136fcb7c8b6e2215dbd30d5e46be2a7c7a2d661ac99570c37288f2a7 [INFO] running `Command { std: "docker" "start" "-a" "01adfbf1136fcb7c8b6e2215dbd30d5e46be2a7c7a2d661ac99570c37288f2a7", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling libc v0.2.108 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling crossbeam-utils v0.8.7 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling memchr v2.4.1 [INFO] [stderr] Compiling cc v1.0.72 [INFO] [stderr] Compiling crossbeam-epoch v0.9.7 [INFO] [stderr] Compiling pkg-config v0.3.23 [INFO] [stderr] Compiling crc32fast v1.2.2 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling ppv-lite86 v0.2.15 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling serde v1.0.130 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling serde_json v1.0.72 [INFO] [stderr] Compiling byteorder v1.4.3 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling hashbrown v0.11.2 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling unicode-width v0.1.9 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling fnv v1.0.7 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling itertools v0.10.3 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling memoffset v0.6.5 [INFO] [stderr] Compiling num-bigint v0.4.3 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling num-rational v0.4.0 [INFO] [stderr] Compiling indexmap v1.7.0 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling crossbeam-channel v0.5.2 [INFO] [stderr] Compiling getrandom v0.2.3 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling num_cpus v1.13.1 [INFO] [stderr] Compiling flate2 v1.0.22 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand_xoshiro v0.6.0 [INFO] [stderr] Compiling rand_xorshift v0.3.0 [INFO] [stderr] Compiling kseq v0.2.6 [INFO] [stderr] Compiling num-complex v0.4.0 [INFO] [stderr] Compiling rand v0.8.4 [INFO] [stderr] Compiling rand_distr v0.4.2 [INFO] [stderr] Compiling env_logger v0.9.0 [INFO] [stderr] Compiling num v0.4.0 [INFO] [stderr] Compiling probminhash v0.1.5 [INFO] [stderr] Compiling fastkmers v0.1.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 22.64s [INFO] running `Command { std: "docker" "inspect" "01adfbf1136fcb7c8b6e2215dbd30d5e46be2a7c7a2d661ac99570c37288f2a7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "01adfbf1136fcb7c8b6e2215dbd30d5e46be2a7c7a2d661ac99570c37288f2a7", kill_on_drop: false }` [INFO] [stdout] 01adfbf1136fcb7c8b6e2215dbd30d5e46be2a7c7a2d661ac99570c37288f2a7 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-90/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-90/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 96f90c922c122dcf5ae8e699f69e47615ccbfe0d5879b7fbdcbfe31b64b41e44 [INFO] running `Command { std: "docker" "start" "-a" "96f90c922c122dcf5ae8e699f69e47615ccbfe0d5879b7fbdcbfe31b64b41e44", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.32 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling syn v1.0.82 [INFO] [stderr] Compiling serde_derive v1.0.130 [INFO] [stderr] Compiling serde v1.0.130 [INFO] [stderr] Compiling predicates-core v1.0.2 [INFO] [stderr] Compiling escargot v0.3.1 [INFO] [stderr] Compiling difference v2.0.0 [INFO] [stderr] Compiling normalize-line-endings v0.3.0 [INFO] [stderr] Compiling termtree v0.2.3 [INFO] [stderr] Compiling float-cmp v0.8.0 [INFO] [stderr] Compiling predicates-tree v1.0.4 [INFO] [stderr] Compiling predicates v1.0.8 [INFO] [stderr] Compiling quote v1.0.10 [INFO] [stderr] Compiling serde_json v1.0.72 [INFO] [stderr] Compiling assert_cmd v0.10.2 [INFO] [stderr] Compiling fastkmers v0.1.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 26.01s [INFO] running `Command { std: "docker" "inspect" "96f90c922c122dcf5ae8e699f69e47615ccbfe0d5879b7fbdcbfe31b64b41e44", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "96f90c922c122dcf5ae8e699f69e47615ccbfe0d5879b7fbdcbfe31b64b41e44", kill_on_drop: false }` [INFO] [stdout] 96f90c922c122dcf5ae8e699f69e47615ccbfe0d5879b7fbdcbfe31b64b41e44 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-90/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-90/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] e0e4254a828b411ec3fe0d74e817951ca44931ddcd01ec1d39a4af205d72fd80 [INFO] running `Command { std: "docker" "start" "-a" "e0e4254a828b411ec3fe0d74e817951ca44931ddcd01ec1d39a4af205d72fd80", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.20s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/fastkmers-8620cae26b940ceb) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/cli.rs (/opt/rustwide/target/debug/deps/cli-6ef31f214fd033af) [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test test_cycle has been running for over 60 seconds [INFO] [stdout] test test_freq has been running for over 60 seconds [INFO] [stdout] test test_kmer_fasta has been running for over 60 seconds [INFO] [stdout] test test_kmer_fastq has been running for over 60 seconds [INFO] [stdout] test test_regex has been running for over 60 seconds [INFO] [stdout] test test_freq ... ok [INFO] [stdout] test test_regex ... ok [INFO] [stdout] test test_kmer_fastq ... ok [INFO] [stdout] test test_kmer_fasta ... ok [INFO] [stdout] test test_cycle ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 66.87s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "e0e4254a828b411ec3fe0d74e817951ca44931ddcd01ec1d39a4af205d72fd80", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e0e4254a828b411ec3fe0d74e817951ca44931ddcd01ec1d39a4af205d72fd80", kill_on_drop: false }` [INFO] [stdout] e0e4254a828b411ec3fe0d74e817951ca44931ddcd01ec1d39a4af205d72fd80