[INFO] cloning repository https://github.com/TianyiShi2001/rust-bio-edu [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/TianyiShi2001/rust-bio-edu" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTianyiShi2001%2Frust-bio-edu", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTianyiShi2001%2Frust-bio-edu'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 536024de8524eb19c08b4381de4f4f2152616c94 [INFO] testing TianyiShi2001/rust-bio-edu against beta-2022-02-22 for beta-1.60-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTianyiShi2001%2Frust-bio-edu" "/workspace/builds/worker-28/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-28/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/TianyiShi2001/rust-bio-edu on toolchain beta-2022-02-22 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/TianyiShi2001/rust-bio-edu [INFO] finished tweaking git repo https://github.com/TianyiShi2001/rust-bio-edu [INFO] tweaked toml for git repo https://github.com/TianyiShi2001/rust-bio-edu written to /workspace/builds/worker-28/source/Cargo.toml [INFO] crate git repo https://github.com/TianyiShi2001/rust-bio-edu already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded nalgebra v0.22.0 [INFO] [stderr] Downloaded simba v0.2.0 [INFO] [stderr] Downloaded libc v0.2.77 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-28/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-28/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] a0d24627953926472e14ddd1364dd1c5b464a0619699aad1aac8fbee980b44bf [INFO] running `Command { std: "docker" "start" "-a" "a0d24627953926472e14ddd1364dd1c5b464a0619699aad1aac8fbee980b44bf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a0d24627953926472e14ddd1364dd1c5b464a0619699aad1aac8fbee980b44bf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a0d24627953926472e14ddd1364dd1c5b464a0619699aad1aac8fbee980b44bf", kill_on_drop: false }` [INFO] [stdout] a0d24627953926472e14ddd1364dd1c5b464a0619699aad1aac8fbee980b44bf [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-28/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-28/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] a22c1f5d8f2fc2db6e9238d75c06f32f70209e991a67fe16b8184de3ec0bfed7 [INFO] running `Command { std: "docker" "start" "-a" "a22c1f5d8f2fc2db6e9238d75c06f32f70209e991a67fe16b8184de3ec0bfed7", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.77 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling rayon-core v1.8.1 [INFO] [stderr] Compiling proc-macro-hack v0.5.18 [INFO] [stderr] Compiling typenum v1.12.0 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-rational v0.2.4 [INFO] [stderr] Compiling rayon v1.4.1 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling generic-array v0.13.2 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling paste v0.1.18 [INFO] [stderr] Compiling simba v0.2.0 [INFO] [stderr] Compiling rand_distr v0.2.2 [INFO] [stderr] Compiling nalgebra v0.22.0 [INFO] [stderr] Compiling bio-edu v0.0.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 17.60s [INFO] running `Command { std: "docker" "inspect" "a22c1f5d8f2fc2db6e9238d75c06f32f70209e991a67fe16b8184de3ec0bfed7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a22c1f5d8f2fc2db6e9238d75c06f32f70209e991a67fe16b8184de3ec0bfed7", kill_on_drop: false }` [INFO] [stdout] a22c1f5d8f2fc2db6e9238d75c06f32f70209e991a67fe16b8184de3ec0bfed7 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-28/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-28/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] c156769ccb47cc8fc546d0512355177c86f9e03e26f0dcb00af5e5cc30ac042b [INFO] running `Command { std: "docker" "start" "-a" "c156769ccb47cc8fc546d0512355177c86f9e03e26f0dcb00af5e5cc30ac042b", kill_on_drop: false }` [INFO] [stderr] Compiling cargo-husky v1.5.0 [INFO] [stderr] Compiling bio-edu v0.0.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 1.73s [INFO] running `Command { std: "docker" "inspect" "c156769ccb47cc8fc546d0512355177c86f9e03e26f0dcb00af5e5cc30ac042b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c156769ccb47cc8fc546d0512355177c86f9e03e26f0dcb00af5e5cc30ac042b", kill_on_drop: false }` [INFO] [stdout] c156769ccb47cc8fc546d0512355177c86f9e03e26f0dcb00af5e5cc30ac042b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-28/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-28/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] e2f95aa80cead0aec6f67c274b1ca63723a96c610ec9f43f0ae9765a5a3cc498 [INFO] running `Command { std: "docker" "start" "-a" "e2f95aa80cead0aec6f67c274b1ca63723a96c610ec9f43f0ae9765a5a3cc498", kill_on_drop: false }` [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.07s [INFO] [stdout] running 4 tests [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/bio_edu-5598009b4bb0b53a) [INFO] [stdout] test alignment::scores::blosum62::tests::test_blosum62 ... ok [INFO] [stdout] test utils::matrix::tests::test_matrix_set ... ok [INFO] [stdout] test utils::matrix::tests::test_matrix_fill ... ok [INFO] [stderr] Doc-tests bio-edu [INFO] [stdout] test utils::matrix::tests::test_matrix_get ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 4 tests [INFO] [stdout] test src/alignment/pairwise/myers_miller.rs - alignment::pairwise::myers_miller::Aligner::find_dual_semiglobal_score_and_termini (line 595) ... ignored [INFO] [stdout] test src/alignment/pairwise/myers_miller.rs - alignment::pairwise::myers_miller::Aligner::find_dual_semiglobal_score_and_termini (line 600) ... ignored [INFO] [stdout] test src/alignment/pairwise/needleman_wunsch_2.rs - alignment::pairwise::needleman_wunsch_2 (line 42) ... ignored [INFO] [stdout] test src/alignment/pairwise/needleman_wunsch_2.rs - alignment::pairwise::needleman_wunsch_2 (line 76) ... ignored [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 4 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "e2f95aa80cead0aec6f67c274b1ca63723a96c610ec9f43f0ae9765a5a3cc498", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e2f95aa80cead0aec6f67c274b1ca63723a96c610ec9f43f0ae9765a5a3cc498", kill_on_drop: false }` [INFO] [stdout] e2f95aa80cead0aec6f67c274b1ca63723a96c610ec9f43f0ae9765a5a3cc498