[INFO] cloning repository https://github.com/NickRoz1/rqtl2-geno-kinship-rust [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/NickRoz1/rqtl2-geno-kinship-rust" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FNickRoz1%2Frqtl2-geno-kinship-rust", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FNickRoz1%2Frqtl2-geno-kinship-rust'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 04d61248daee802a355c018b0ddc5dddf2c6b3cf [INFO] testing NickRoz1/rqtl2-geno-kinship-rust against beta-2022-02-22 for beta-1.60-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FNickRoz1%2Frqtl2-geno-kinship-rust" "/workspace/builds/worker-12/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-12/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/NickRoz1/rqtl2-geno-kinship-rust on toolchain beta-2022-02-22 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/NickRoz1/rqtl2-geno-kinship-rust [INFO] finished tweaking git repo https://github.com/NickRoz1/rqtl2-geno-kinship-rust [INFO] tweaked toml for git repo https://github.com/NickRoz1/rqtl2-geno-kinship-rust written to /workspace/builds/worker-12/source/Cargo.toml [INFO] crate git repo https://github.com/NickRoz1/rqtl2-geno-kinship-rust already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2022-02-22" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 256630f937398055b815ba733bc4ff4d08394e21c72c3488909a5ee2cba9dd97 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "256630f937398055b815ba733bc4ff4d08394e21c72c3488909a5ee2cba9dd97", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "256630f937398055b815ba733bc4ff4d08394e21c72c3488909a5ee2cba9dd97", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "256630f937398055b815ba733bc4ff4d08394e21c72c3488909a5ee2cba9dd97", kill_on_drop: false }` [INFO] [stdout] 256630f937398055b815ba733bc4ff4d08394e21c72c3488909a5ee2cba9dd97 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 8e483dbcdde8c50f560ae56602094603f0ebe93e00c1b0d7746cf17fa95ae7fe [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "8e483dbcdde8c50f560ae56602094603f0ebe93e00c1b0d7746cf17fa95ae7fe", kill_on_drop: false }` [INFO] [stderr] Compiling kinship_matrix v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/lib.rs:285:9 [INFO] [stdout] | [INFO] [stdout] 285 | / format!( [INFO] [stdout] 286 | | "Amount of SNPS (lines in file - (1+comments_lines_count)) should be \ [INFO] [stdout] 287 | | greater or equal to amount of ids \ [INFO] [stdout] 288 | | (amount of markers). SNP number: {}, IDS number: {}", [INFO] [stdout] 289 | | total_snps_read, ids_num [INFO] [stdout] 290 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of assert!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 285 ~ [INFO] [stdout] 286 | "Amount of SNPS (lines in file - (1+comments_lines_count)) should be \ [INFO] [stdout] 287 | greater or equal to amount of ids \ [INFO] [stdout] 288 | (amount of markers). SNP number: {}, IDS number: {}", [INFO] [stdout] 289 | total_snps_read, ids_num [INFO] [stdout] 290 ~ [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1.71s [INFO] running `Command { std: "docker" "inspect" "8e483dbcdde8c50f560ae56602094603f0ebe93e00c1b0d7746cf17fa95ae7fe", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8e483dbcdde8c50f560ae56602094603f0ebe93e00c1b0d7746cf17fa95ae7fe", kill_on_drop: false }` [INFO] [stdout] 8e483dbcdde8c50f560ae56602094603f0ebe93e00c1b0d7746cf17fa95ae7fe [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3a049c7524fe2f6835a7db1dfed0cb273a60eafcaffba921ecb2c329185a6b7b [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "3a049c7524fe2f6835a7db1dfed0cb273a60eafcaffba921ecb2c329185a6b7b", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling kinship_matrix v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/lib.rs:285:9 [INFO] [stdout] | [INFO] [stdout] 285 | / format!( [INFO] [stdout] 286 | | "Amount of SNPS (lines in file - (1+comments_lines_count)) should be \ [INFO] [stdout] 287 | | greater or equal to amount of ids \ [INFO] [stdout] 288 | | (amount of markers). SNP number: {}, IDS number: {}", [INFO] [stdout] 289 | | total_snps_read, ids_num [INFO] [stdout] 290 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of assert!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 285 ~ [INFO] [stdout] 286 | "Amount of SNPS (lines in file - (1+comments_lines_count)) should be \ [INFO] [stdout] 287 | greater or equal to amount of ids \ [INFO] [stdout] 288 | (amount of markers). SNP number: {}, IDS number: {}", [INFO] [stdout] 289 | total_snps_read, ids_num [INFO] [stdout] 290 ~ [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/lib.rs:285:9 [INFO] [stdout] | [INFO] [stdout] 285 | / format!( [INFO] [stdout] 286 | | "Amount of SNPS (lines in file - (1+comments_lines_count)) should be \ [INFO] [stdout] 287 | | greater or equal to amount of ids \ [INFO] [stdout] 288 | | (amount of markers). SNP number: {}, IDS number: {}", [INFO] [stdout] 289 | | total_snps_read, ids_num [INFO] [stdout] 290 | | ) [INFO] [stdout] | |_________^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of assert!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 285 ~ [INFO] [stdout] 286 | "Amount of SNPS (lines in file - (1+comments_lines_count)) should be \ [INFO] [stdout] 287 | greater or equal to amount of ids \ [INFO] [stdout] 288 | (amount of markers). SNP number: {}, IDS number: {}", [INFO] [stdout] 289 | total_snps_read, ids_num [INFO] [stdout] 290 ~ [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 2.38s [INFO] running `Command { std: "docker" "inspect" "3a049c7524fe2f6835a7db1dfed0cb273a60eafcaffba921ecb2c329185a6b7b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3a049c7524fe2f6835a7db1dfed0cb273a60eafcaffba921ecb2c329185a6b7b", kill_on_drop: false }` [INFO] [stdout] 3a049c7524fe2f6835a7db1dfed0cb273a60eafcaffba921ecb2c329185a6b7b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2022-02-22" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 0f14cd1837d3f944812e231212a853c61776c817fad968bfdcd1eae53d2607db [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "0f14cd1837d3f944812e231212a853c61776c817fad968bfdcd1eae53d2607db", kill_on_drop: false }` [INFO] [stderr] warning: panic message is not a string literal [INFO] [stderr] --> src/lib.rs:285:9 [INFO] [stderr] | [INFO] [stderr] 285 | / format!( [INFO] [stderr] 286 | | "Amount of SNPS (lines in file - (1+comments_lines_count)) should be \ [INFO] [stderr] 287 | | greater or equal to amount of ids \ [INFO] [stderr] 288 | | (amount of markers). SNP number: {}, IDS number: {}", [INFO] [stderr] 289 | | total_snps_read, ids_num [INFO] [stderr] 290 | | ) [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stderr] = note: this usage of assert!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stderr] = note: for more information, see [INFO] [stderr] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stderr] help: remove the `format!(..)` macro call [INFO] [stderr] | [INFO] [stderr] 285 ~ [INFO] [stderr] 286 | "Amount of SNPS (lines in file - (1+comments_lines_count)) should be \ [INFO] [stderr] 287 | greater or equal to amount of ids \ [INFO] [stderr] 288 | (amount of markers). SNP number: {}, IDS number: {}", [INFO] [stderr] 289 | total_snps_read, ids_num [INFO] [stderr] 290 ~ [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: `kinship_matrix` (lib) generated 1 warning [INFO] [stderr] warning: `kinship_matrix` (lib test) generated 1 warning (1 duplicate) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.02s [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/rqtl2-155cc32a7424d5c5) [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/tests.rs (/opt/rustwide/target/debug/deps/tests-2b9953ae0177af67) [INFO] [stdout] [INFO] [stdout] running 4 tests [INFO] [stdout] test tests::parsers ... ok [INFO] [stdout] test tests::snp_iter ... ok [INFO] [stdout] test tests::read_snps ... ok [INFO] [stderr] Doc-tests rqtl2 [INFO] [stdout] test tests::calc_kinsip ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "0f14cd1837d3f944812e231212a853c61776c817fad968bfdcd1eae53d2607db", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0f14cd1837d3f944812e231212a853c61776c817fad968bfdcd1eae53d2607db", kill_on_drop: false }` [INFO] [stdout] 0f14cd1837d3f944812e231212a853c61776c817fad968bfdcd1eae53d2607db