[INFO] fetching crate genovo 0.2.6... [INFO] testing genovo-0.2.6 against 1.59.0 for beta-1.60-1 [INFO] extracting crate genovo 0.2.6 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate genovo 0.2.6 on toolchain 1.59.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.59.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate genovo 0.2.6 [INFO] finished tweaking crates.io crate genovo 0.2.6 [INFO] tweaked toml for crates.io crate genovo 0.2.6 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] crate crates.io crate genovo 0.2.6 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.59.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+1.59.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 2272f89dde92e0209b2e33db88c507eb8fdcf7ed299cc7f539e07242e8f2f273 [INFO] running `Command { std: "docker" "start" "-a" "2272f89dde92e0209b2e33db88c507eb8fdcf7ed299cc7f539e07242e8f2f273", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "2272f89dde92e0209b2e33db88c507eb8fdcf7ed299cc7f539e07242e8f2f273", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2272f89dde92e0209b2e33db88c507eb8fdcf7ed299cc7f539e07242e8f2f273", kill_on_drop: false }` [INFO] [stdout] 2272f89dde92e0209b2e33db88c507eb8fdcf7ed299cc7f539e07242e8f2f273 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+1.59.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9193f38f461b5417165c533e71cd3f9b729fcd402e6f52eef25c24f21731238b [INFO] running `Command { std: "docker" "start" "-a" "9193f38f461b5417165c533e71cd3f9b729fcd402e6f52eef25c24f21731238b", kill_on_drop: false }` [INFO] [stderr] Compiling syn v1.0.53 [INFO] [stderr] Compiling libc v0.2.80 [INFO] [stderr] Compiling serde_derive v1.0.117 [INFO] [stderr] Compiling serde v1.0.117 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling ppv-lite86 v0.2.10 [INFO] [stderr] Compiling adler v0.2.3 [INFO] [stderr] Compiling anyhow v1.0.34 [INFO] [stderr] Compiling tabfile v0.2.1 [INFO] [stderr] Compiling itoa v0.4.6 [INFO] [stderr] Compiling twobit v0.1.1 [INFO] [stderr] Compiling num-bigint v0.3.1 [INFO] [stderr] Compiling miniz_oxide v0.4.3 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling pattern_partition_prediction v0.1.4 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling flate2 v1.0.19 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling bigdecimal v0.2.0 [INFO] [stderr] Compiling thiserror-impl v1.0.22 [INFO] [stderr] Compiling serde_repr v0.1.6 [INFO] [stderr] Compiling thiserror v1.0.22 [INFO] [stderr] Compiling bstr v0.2.14 [INFO] [stderr] Compiling mutexpect v0.2.7 [INFO] [stderr] Compiling csv v1.1.5 [INFO] [stderr] Compiling genovo v0.2.6 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 17.87s [INFO] running `Command { std: "docker" "inspect" "9193f38f461b5417165c533e71cd3f9b729fcd402e6f52eef25c24f21731238b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9193f38f461b5417165c533e71cd3f9b729fcd402e6f52eef25c24f21731238b", kill_on_drop: false }` [INFO] [stdout] 9193f38f461b5417165c533e71cd3f9b729fcd402e6f52eef25c24f21731238b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+1.59.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d0f266584e86e7059f8341852b5104f104972820e5b71006f351eb922a93abb6 [INFO] running `Command { std: "docker" "start" "-a" "d0f266584e86e7059f8341852b5104f104972820e5b71006f351eb922a93abb6", kill_on_drop: false }` [INFO] [stderr] Compiling genovo v0.2.6 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 2.44s [INFO] running `Command { std: "docker" "inspect" "d0f266584e86e7059f8341852b5104f104972820e5b71006f351eb922a93abb6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d0f266584e86e7059f8341852b5104f104972820e5b71006f351eb922a93abb6", kill_on_drop: false }` [INFO] [stdout] d0f266584e86e7059f8341852b5104f104972820e5b71006f351eb922a93abb6 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+1.59.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] a15adaa5086f74c00d0ae59c0d21f356be24bde8b148310b3e35166acb62d01c [INFO] running `Command { std: "docker" "start" "-a" "a15adaa5086f74c00d0ae59c0d21f356be24bde8b148310b3e35166acb62d01c", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.02s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/genovo-e17bde1721b56d6a) [INFO] [stdout] [INFO] [stdout] running 8 tests [INFO] [stdout] test counts::tests::test_conf_interval ... ok [INFO] [stdout] test counts::tests::test_p_values ... ok [INFO] [stdout] test transform::tests::test_region_file_io ... ok [INFO] [stdout] test transform::tests::test_gff3_io ... ok [INFO] [stdout] test enumerate::tests::test_possible_mutations_io ... ok [INFO] [stdout] test expect::tests::test_expected_mutations_io ... ok [INFO] [stdout] test sample::tests::test_sampled_mutations_io ... ok [INFO] [stdout] test observed::tests::test_observed_mutations_io ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "a15adaa5086f74c00d0ae59c0d21f356be24bde8b148310b3e35166acb62d01c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a15adaa5086f74c00d0ae59c0d21f356be24bde8b148310b3e35166acb62d01c", kill_on_drop: false }` [INFO] [stdout] a15adaa5086f74c00d0ae59c0d21f356be24bde8b148310b3e35166acb62d01c