[INFO] cloning repository https://github.com/TianyiShi2001/rust-bio-edu [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/TianyiShi2001/rust-bio-edu" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTianyiShi2001%2Frust-bio-edu", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTianyiShi2001%2Frust-bio-edu'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 536024de8524eb19c08b4381de4f4f2152616c94 [INFO] testing TianyiShi2001/rust-bio-edu against 1.59.0 for beta-1.60-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTianyiShi2001%2Frust-bio-edu" "/workspace/builds/worker-3/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/TianyiShi2001/rust-bio-edu on toolchain 1.59.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.59.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/TianyiShi2001/rust-bio-edu [INFO] finished tweaking git repo https://github.com/TianyiShi2001/rust-bio-edu [INFO] tweaked toml for git repo https://github.com/TianyiShi2001/rust-bio-edu written to /workspace/builds/worker-3/source/Cargo.toml [INFO] crate git repo https://github.com/TianyiShi2001/rust-bio-edu already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.59.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+1.59.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] f24289b94f4b4a94ad3bb4d2980acb9aa4349216fcf11760ed5245799ef8c9c5 [INFO] running `Command { std: "docker" "start" "-a" "f24289b94f4b4a94ad3bb4d2980acb9aa4349216fcf11760ed5245799ef8c9c5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "f24289b94f4b4a94ad3bb4d2980acb9aa4349216fcf11760ed5245799ef8c9c5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f24289b94f4b4a94ad3bb4d2980acb9aa4349216fcf11760ed5245799ef8c9c5", kill_on_drop: false }` [INFO] [stdout] f24289b94f4b4a94ad3bb4d2980acb9aa4349216fcf11760ed5245799ef8c9c5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+1.59.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3df1520d361cdcbd5d60da5e6f91e8bcc116ba4fe9f511d4b786bca712e96416 [INFO] running `Command { std: "docker" "start" "-a" "3df1520d361cdcbd5d60da5e6f91e8bcc116ba4fe9f511d4b786bca712e96416", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.77 [INFO] [stderr] Compiling ppv-lite86 v0.2.9 [INFO] [stderr] Compiling rayon-core v1.8.1 [INFO] [stderr] Compiling proc-macro-hack v0.5.18 [INFO] [stderr] Compiling either v1.6.0 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling memoffset v0.5.5 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-rational v0.2.4 [INFO] [stderr] Compiling rayon v1.4.1 [INFO] [stderr] Compiling generic-array v0.13.2 [INFO] [stderr] Compiling crossbeam-channel v0.4.4 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Compiling crossbeam-deque v0.7.3 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling paste v0.1.18 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling simba v0.2.0 [INFO] [stderr] Compiling rand_distr v0.2.2 [INFO] [stderr] Compiling nalgebra v0.22.0 [INFO] [stderr] Compiling bio-edu v0.0.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 18.12s [INFO] running `Command { std: "docker" "inspect" "3df1520d361cdcbd5d60da5e6f91e8bcc116ba4fe9f511d4b786bca712e96416", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3df1520d361cdcbd5d60da5e6f91e8bcc116ba4fe9f511d4b786bca712e96416", kill_on_drop: false }` [INFO] [stdout] 3df1520d361cdcbd5d60da5e6f91e8bcc116ba4fe9f511d4b786bca712e96416 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+1.59.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 2531fd9aeea195e387b1bae1b7ff596019a2d31595a1b8d8fabdf42e6019c041 [INFO] running `Command { std: "docker" "start" "-a" "2531fd9aeea195e387b1bae1b7ff596019a2d31595a1b8d8fabdf42e6019c041", kill_on_drop: false }` [INFO] [stderr] Compiling cargo-husky v1.5.0 [INFO] [stderr] Compiling bio-edu v0.0.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 1.85s [INFO] running `Command { std: "docker" "inspect" "2531fd9aeea195e387b1bae1b7ff596019a2d31595a1b8d8fabdf42e6019c041", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2531fd9aeea195e387b1bae1b7ff596019a2d31595a1b8d8fabdf42e6019c041", kill_on_drop: false }` [INFO] [stdout] 2531fd9aeea195e387b1bae1b7ff596019a2d31595a1b8d8fabdf42e6019c041 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:0cd99ca24d8e8c98e67c542213511d985b8778b5bdcbb160e038429496686047" "/opt/rustwide/cargo-home/bin/cargo" "+1.59.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 61460c938b68a11eb5a5db155d7b4f2d28d59d791ea01b681452defbf68cd088 [INFO] running `Command { std: "docker" "start" "-a" "61460c938b68a11eb5a5db155d7b4f2d28d59d791ea01b681452defbf68cd088", kill_on_drop: false }` [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.03s [INFO] [stdout] running 4 tests [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/bio_edu-72a918b6ef67fabf) [INFO] [stdout] test utils::matrix::tests::test_matrix_get ... ok [INFO] [stderr] Doc-tests bio-edu [INFO] [stdout] test utils::matrix::tests::test_matrix_set ... ok [INFO] [stdout] test utils::matrix::tests::test_matrix_fill ... ok [INFO] [stdout] test alignment::scores::blosum62::tests::test_blosum62 ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 4 tests [INFO] [stdout] test src/alignment/pairwise/myers_miller.rs - alignment::pairwise::myers_miller::Aligner::find_dual_semiglobal_score_and_termini (line 595) ... ignored [INFO] [stdout] test src/alignment/pairwise/myers_miller.rs - alignment::pairwise::myers_miller::Aligner::find_dual_semiglobal_score_and_termini (line 600) ... ignored [INFO] [stdout] test src/alignment/pairwise/needleman_wunsch_2.rs - alignment::pairwise::needleman_wunsch_2 (line 42) ... ignored [INFO] [stdout] test src/alignment/pairwise/needleman_wunsch_2.rs - alignment::pairwise::needleman_wunsch_2 (line 76) ... ignored [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 4 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "61460c938b68a11eb5a5db155d7b4f2d28d59d791ea01b681452defbf68cd088", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "61460c938b68a11eb5a5db155d7b4f2d28d59d791ea01b681452defbf68cd088", kill_on_drop: false }` [INFO] [stdout] 61460c938b68a11eb5a5db155d7b4f2d28d59d791ea01b681452defbf68cd088