[INFO] cloning repository https://github.com/wheaton5/het_snp_kmers [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/wheaton5/het_snp_kmers" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Fhet_snp_kmers", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Fhet_snp_kmers'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 81bddfa5537686072c13ab3780d45ca0c99b9b0a [INFO] testing wheaton5/het_snp_kmers against 1.55.0 for beta-1.56-2 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Fhet_snp_kmers" "/workspace/builds/worker-10/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-10/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/wheaton5/het_snp_kmers on toolchain 1.55.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/wheaton5/het_snp_kmers [INFO] finished tweaking git repo https://github.com/wheaton5/het_snp_kmers [INFO] tweaked toml for git repo https://github.com/wheaton5/het_snp_kmers written to /workspace/builds/worker-10/source/Cargo.toml [INFO] crate git repo https://github.com/wheaton5/het_snp_kmers already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] ee55f0eaed0e99a09c2f43bbc6620f43e35efc676d5637ef64b70f336b98e086 [INFO] running `Command { std: "docker" "start" "-a" "ee55f0eaed0e99a09c2f43bbc6620f43e35efc676d5637ef64b70f336b98e086", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "ee55f0eaed0e99a09c2f43bbc6620f43e35efc676d5637ef64b70f336b98e086", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ee55f0eaed0e99a09c2f43bbc6620f43e35efc676d5637ef64b70f336b98e086", kill_on_drop: false }` [INFO] [stdout] ee55f0eaed0e99a09c2f43bbc6620f43e35efc676d5637ef64b70f336b98e086 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9587caeff7409f602ef16f658cd133fbffcca7ac0b7856fb8e915e736ffcac72 [INFO] running `Command { std: "docker" "start" "-a" "9587caeff7409f602ef16f658cd133fbffcca7ac0b7856fb8e915e736ffcac72", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.62 [INFO] [stderr] Compiling proc-macro2 v1.0.24 [INFO] [stderr] Compiling syn v1.0.64 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Compiling serde_derive v1.0.124 [INFO] [stderr] Compiling serde v1.0.124 [INFO] [stderr] Compiling getrandom v0.1.12 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling cfg-if v0.1.9 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling rand_core v0.6.2 [INFO] [stderr] Compiling serde_json v1.0.64 [INFO] [stderr] Compiling ppv-lite86 v0.2.5 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling unicode-width v0.1.5 [INFO] [stderr] Compiling itoa v0.4.7 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling ansi_term v0.9.0 [INFO] [stderr] Compiling strsim v0.6.0 [INFO] [stderr] Compiling bitflags v0.9.1 [INFO] [stderr] Compiling smallvec v1.6.1 [INFO] [stderr] Compiling scopeguard v0.3.3 [INFO] [stderr] Compiling byteorder v1.2.7 [INFO] [stderr] Compiling fnv v1.0.6 [INFO] [stderr] Compiling crossbeam-utils v0.8.3 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling memoffset v0.6.1 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling bit-set v0.5.2 [INFO] [stderr] Compiling itertools v0.10.0 [INFO] [stderr] Compiling textwrap v0.9.0 [INFO] [stderr] Compiling wyhash v0.5.0 [INFO] [stderr] Compiling hashbrown v0.1.8 [INFO] [stderr] Compiling c2-chacha v0.2.2 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling atty v0.2.11 [INFO] [stderr] Compiling crossbeam-epoch v0.9.3 [INFO] [stderr] Compiling crossbeam-channel v0.5.0 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling clap v2.27.1 [INFO] [stderr] Compiling rand_chacha v0.2.1 [INFO] [stderr] Compiling num-complex v0.3.1 [INFO] [stderr] Compiling crossbeam-deque v0.8.0 [INFO] [stderr] Compiling rand v0.7.2 [INFO] [stderr] Compiling num-bigint v0.3.2 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling num v0.3.1 [INFO] [stderr] Compiling boomphf v0.5.9 [INFO] [stderr] Compiling debruijn v0.3.2 (https://github.com/10XGenomics/rust-debruijn.git#f6e9188a) [INFO] [stderr] Compiling het_snp_kmers v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `debruijn::kmer::*` [INFO] [stdout] --> src/main.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use debruijn::kmer::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Write` [INFO] [stdout] --> src/main.rs:17:5 [INFO] [stdout] | [INFO] [stdout] 17 | use std::io::Write; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::error::Error` [INFO] [stdout] --> src/main.rs:18:5 [INFO] [stdout] | [INFO] [stdout] 18 | use std::error::Error; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::cmp::min` [INFO] [stdout] --> src/main.rs:29:5 [INFO] [stdout] | [INFO] [stdout] 29 | use std::cmp::min; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `debruijn` [INFO] [stdout] --> src/main.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use debruijn::*; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `het_kmers` [INFO] [stdout] --> src/main.rs:33:10 [INFO] [stdout] | [INFO] [stdout] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stdout] | ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmers` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `het_kmer_pairs` [INFO] [stdout] --> src/main.rs:33:21 [INFO] [stdout] | [INFO] [stdout] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmer_pairs` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `kmer_u64` [INFO] [stdout] --> src/main.rs:109:25 [INFO] [stdout] | [INFO] [stdout] 109 | let kmer_u64 = twobit(&kmer); [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_kmer_u64` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 8 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 47.43s [INFO] running `Command { std: "docker" "inspect" "9587caeff7409f602ef16f658cd133fbffcca7ac0b7856fb8e915e736ffcac72", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9587caeff7409f602ef16f658cd133fbffcca7ac0b7856fb8e915e736ffcac72", kill_on_drop: false }` [INFO] [stdout] 9587caeff7409f602ef16f658cd133fbffcca7ac0b7856fb8e915e736ffcac72 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 223d33ce8a184f5915765e753c36b1284adc8d25c63b85f2791ff85b7c754bff [INFO] running `Command { std: "docker" "start" "-a" "223d33ce8a184f5915765e753c36b1284adc8d25c63b85f2791ff85b7c754bff", kill_on_drop: false }` [INFO] [stderr] Compiling het_snp_kmers v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `debruijn::kmer::*` [INFO] [stdout] --> src/main.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use debruijn::kmer::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Write` [INFO] [stdout] --> src/main.rs:17:5 [INFO] [stdout] | [INFO] [stdout] 17 | use std::io::Write; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::error::Error` [INFO] [stdout] --> src/main.rs:18:5 [INFO] [stdout] | [INFO] [stdout] 18 | use std::error::Error; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::cmp::min` [INFO] [stdout] --> src/main.rs:29:5 [INFO] [stdout] | [INFO] [stdout] 29 | use std::cmp::min; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `debruijn` [INFO] [stdout] --> src/main.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use debruijn::*; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `het_kmers` [INFO] [stdout] --> src/main.rs:33:10 [INFO] [stdout] | [INFO] [stdout] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stdout] | ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmers` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `het_kmer_pairs` [INFO] [stdout] --> src/main.rs:33:21 [INFO] [stdout] | [INFO] [stdout] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmer_pairs` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `kmer_u64` [INFO] [stdout] --> src/main.rs:109:25 [INFO] [stdout] | [INFO] [stdout] 109 | let kmer_u64 = twobit(&kmer); [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_kmer_u64` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 8 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.88s [INFO] running `Command { std: "docker" "inspect" "223d33ce8a184f5915765e753c36b1284adc8d25c63b85f2791ff85b7c754bff", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "223d33ce8a184f5915765e753c36b1284adc8d25c63b85f2791ff85b7c754bff", kill_on_drop: false }` [INFO] [stdout] 223d33ce8a184f5915765e753c36b1284adc8d25c63b85f2791ff85b7c754bff [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] cb2475ccc6af0f32831c109f481ee37c16b985e9f9d6eb9715a11f88c43e859c [INFO] running `Command { std: "docker" "start" "-a" "cb2475ccc6af0f32831c109f481ee37c16b985e9f9d6eb9715a11f88c43e859c", kill_on_drop: false }` [INFO] [stderr] warning: unused import: `debruijn::kmer::*` [INFO] [stderr] --> src/main.rs:8:5 [INFO] [stderr] | [INFO] [stderr] 8 | use debruijn::kmer::*; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `std::io::Write` [INFO] [stderr] --> src/main.rs:17:5 [INFO] [stderr] | [INFO] [stderr] 17 | use std::io::Write; [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `std::error::Error` [INFO] [stderr] --> src/main.rs:18:5 [INFO] [stderr] | [INFO] [stderr] 18 | use std::error::Error; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `std::cmp::min` [INFO] [stderr] --> src/main.rs:29:5 [INFO] [stderr] | [INFO] [stderr] 29 | use std::cmp::min; [INFO] [stderr] | ^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `debruijn` [INFO] [stderr] --> src/main.rs:7:5 [INFO] [stderr] | [INFO] [stderr] 7 | use debruijn::*; [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused variable: `het_kmers` [INFO] [stderr] --> src/main.rs:33:10 [INFO] [stderr] | [INFO] [stderr] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stderr] | ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmers` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `het_kmer_pairs` [INFO] [stderr] --> src/main.rs:33:21 [INFO] [stderr] | [INFO] [stderr] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stderr] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmer_pairs` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `kmer_u64` [INFO] [stderr] --> src/main.rs:109:25 [INFO] [stderr] | [INFO] [stderr] 109 | let kmer_u64 = twobit(&kmer); [INFO] [stderr] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_kmer_u64` [INFO] [stderr] [INFO] [stderr] warning: `het_snp_kmers` (bin "het_snp_kmers" test) generated 8 warnings [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.07s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/het_snp_kmers-ea48bcf774d91409) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "cb2475ccc6af0f32831c109f481ee37c16b985e9f9d6eb9715a11f88c43e859c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cb2475ccc6af0f32831c109f481ee37c16b985e9f9d6eb9715a11f88c43e859c", kill_on_drop: false }` [INFO] [stdout] cb2475ccc6af0f32831c109f481ee37c16b985e9f9d6eb9715a11f88c43e859c