[INFO] cloning repository https://github.com/stjude/fqlib
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/stjude/fqlib" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstjude%2Ffqlib", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstjude%2Ffqlib'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 1dbf7d6ebc8f7d05cf282579b95d34a15ad5c565
[INFO] testing stjude/fqlib against beta-2021-09-08 for beta-1.56-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstjude%2Ffqlib" "/workspace/builds/worker-106/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-106/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/stjude/fqlib on toolchain beta-2021-09-08
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-09-08" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/stjude/fqlib
[INFO] finished tweaking git repo https://github.com/stjude/fqlib
[INFO] tweaked toml for git repo https://github.com/stjude/fqlib written to /workspace/builds/worker-106/source/Cargo.toml
[INFO] crate git repo https://github.com/stjude/fqlib already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-09-08" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating git repository `https://github.com/zaeleus/bbloom.git`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-106/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-106/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 76f480116aa60024f3059781987c274af0d403f7a4da5d0c6f057779b1f6124e
[INFO] running `Command { std: "docker" "start" "-a" "76f480116aa60024f3059781987c274af0d403f7a4da5d0c6f057779b1f6124e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "76f480116aa60024f3059781987c274af0d403f7a4da5d0c6f057779b1f6124e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "76f480116aa60024f3059781987c274af0d403f7a4da5d0c6f057779b1f6124e", kill_on_drop: false }`
[INFO] [stdout] 76f480116aa60024f3059781987c274af0d403f7a4da5d0c6f057779b1f6124e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-106/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-106/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3cdabe034de356bad062105d4f42364ce6f07212f0bc6de88ae6f1bb7a5b22c4
[INFO] running `Command { std: "docker" "start" "-a" "3cdabe034de356bad062105d4f42364ce6f07212f0bc6de88ae6f1bb7a5b22c4", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling libc v0.2.101
[INFO] [stderr]    Compiling libm v0.2.1
[INFO] [stderr]    Compiling proc-macro2 v1.0.29
[INFO] [stderr]    Compiling unicode-xid v0.2.2
[INFO] [stderr]    Compiling syn v1.0.76
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling log v0.4.14
[INFO] [stderr]    Compiling serde v1.0.130
[INFO] [stderr]    Compiling regex-syntax v0.6.25
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]    Compiling ppv-lite86 v0.2.10
[INFO] [stderr]    Compiling serde_json v1.0.67
[INFO] [stderr]    Compiling adler v1.0.2
[INFO] [stderr]    Compiling once_cell v1.8.0
[INFO] [stderr]    Compiling anyhow v1.0.43
[INFO] [stderr]    Compiling itoa v0.4.8
[INFO] [stderr]    Compiling unicode-width v0.1.8
[INFO] [stderr]    Compiling pin-project-lite v0.2.7
[INFO] [stderr]    Compiling smallvec v1.6.1
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling bitflags v1.3.2
[INFO] [stderr]    Compiling bit-vec v0.5.1
[INFO] [stderr]    Compiling ansi_term v0.12.1
[INFO] [stderr]    Compiling ansi_term v0.11.0
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling no-std-compat v0.4.1
[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling miniz_oxide v0.4.4
[INFO] [stderr]    Compiling tracing-core v0.1.19
[INFO] [stderr]    Compiling sharded-slab v0.1.3
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling thread_local v1.1.3
[INFO] [stderr]    Compiling tracing-log v0.1.2
[INFO] [stderr]    Compiling quote v1.0.9
[INFO] [stderr]    Compiling time v0.1.43
[INFO] [stderr]    Compiling getrandom v0.2.3
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling bbloom v0.1.0 (https://github.com/zaeleus/bbloom.git?tag=v0.1.0#2c9f6163)
[INFO] [stderr]    Compiling flate2 v1.0.21
[INFO] [stderr]    Compiling clap v2.33.3
[INFO] [stderr]    Compiling rand_core v0.6.3
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling regex-automata v0.1.10
[INFO] [stderr]    Compiling regex v1.5.4
[INFO] [stderr]    Compiling rand v0.8.4
[INFO] [stderr]    Compiling chrono v0.4.19
[INFO] [stderr]    Compiling matchers v0.0.1
[INFO] [stderr]    Compiling rand_distr v0.4.1
[INFO] [stderr]    Compiling tracing-serde v0.1.2
[INFO] [stderr]    Compiling tracing-attributes v0.1.15
[INFO] [stderr]    Compiling git-testament-derive v0.1.12
[INFO] [stderr]    Compiling git-testament v0.2.0
[INFO] [stderr]    Compiling tracing v0.1.26
[INFO] [stderr]    Compiling tracing-subscriber v0.2.20
[INFO] [stderr]    Compiling fqlib v0.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 33.79s
[INFO] running `Command { std: "docker" "inspect" "3cdabe034de356bad062105d4f42364ce6f07212f0bc6de88ae6f1bb7a5b22c4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3cdabe034de356bad062105d4f42364ce6f07212f0bc6de88ae6f1bb7a5b22c4", kill_on_drop: false }`
[INFO] [stdout] 3cdabe034de356bad062105d4f42364ce6f07212f0bc6de88ae6f1bb7a5b22c4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-106/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-106/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] f7e0985e78bd975bba75fe1ed36acbb8433c701305944585dd4fc86a886ab1f7
[INFO] running `Command { std: "docker" "start" "-a" "f7e0985e78bd975bba75fe1ed36acbb8433c701305944585dd4fc86a886ab1f7", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling fqlib v0.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 46.50s
[INFO] running `Command { std: "docker" "inspect" "f7e0985e78bd975bba75fe1ed36acbb8433c701305944585dd4fc86a886ab1f7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f7e0985e78bd975bba75fe1ed36acbb8433c701305944585dd4fc86a886ab1f7", kill_on_drop: false }`
[INFO] [stdout] f7e0985e78bd975bba75fe1ed36acbb8433c701305944585dd4fc86a886ab1f7
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-106/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-106/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 3fa8284b00427f53dc1610672f4d38f0dec116c9c682413696d8ee25c76c59b5
[INFO] running `Command { std: "docker" "start" "-a" "3fa8284b00427f53dc1610672f4d38f0dec116c9c682413696d8ee25c76c59b5", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 1.08s
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/fqlib-4f8a4979c740b7f4)
[INFO] [stdout] 
[INFO] [stdout] running 52 tests
[INFO] [stdout] test commands::filter::tests::test_name_id ... ok
[INFO] [stdout] test commands::filter::tests::test_copy_filtered ... ok
[INFO] [stdout] test commands::lint::tests::test_build_error_message ... ok
[INFO] [stdout] test commands::filter::tests::test_read_names ... ok
[INFO] [stdout] test commands::lint::tests::test_build_error_message_with_no_col_no ... ok
[INFO] [stdout] test distributions::character::tests::test_sample ... ok
[INFO] [stdout] test fastq::reader::tests::test_read_line ... ok
[INFO] [stdout] test fastq::reader::tests::test_read_record ... ok
[INFO] [stdout] test fastq::record::tests::test_clear ... ok
[INFO] [stdout] test fastq::writer::tests::test_write_record ... ok
[INFO] [stdout] test generator::builder::tests::test_build ... ok
[INFO] [stdout] test validators::paired::names::tests::test_code ... ok
[INFO] [stdout] test generator::tests::test_next_record ... ok
[INFO] [stdout] test generator::tests::test_next_record_with_read_length ... ok
[INFO] [stdout] test validators::paired::names::tests::test_level ... ok
[INFO] [stdout] test validators::paired::names::tests::test_name ... ok
[INFO] [stdout] test validators::paired::names::tests::test_validate ... ok
[INFO] [stdout] test validators::single::alphabet::tests::test_level ... ok
[INFO] [stdout] test validators::single::alphabet::tests::test_code ... ok
[INFO] [stdout] test validators::single::alphabet::tests::test_name ... ok
[INFO] [stdout] test validators::single::alphabet::tests::test_new ... ok
[INFO] [stdout] test validators::single::alphabet::tests::test_validate ... ok
[INFO] [stdout] test validators::single::complete::tests::test_code ... ok
[INFO] [stdout] test validators::single::complete::tests::test_name ... ok
[INFO] [stdout] test validators::single::complete::tests::test_level ... ok
[INFO] [stdout] test validators::single::complete::tests::test_validate ... ok
[INFO] [stdout] test validators::single::consistent_seq_qual::tests::test_code ... ok
[INFO] [stdout] test validators::single::consistent_seq_qual::tests::test_level ... ok
[INFO] [stdout] test validators::single::consistent_seq_qual::tests::test_name ... ok
[INFO] [stdout] test validators::single::consistent_seq_qual::tests::test_validate ... ok
[INFO] [stdout] test validators::single::duplicate_name::tests::test_code ... ok
[INFO] [stdout] test validators::single::duplicate_name::tests::test_is_empty ... ok
[INFO] [stdout] test validators::single::name::tests::test_code ... ok
[INFO] [stdout] test validators::single::duplicate_name::tests::test_level ... ok
[INFO] [stdout] test validators::single::duplicate_name::tests::test_name ... ok
[INFO] [stdout] test validators::single::name::tests::test_level ... ok
[INFO] [stdout] test validators::single::name::tests::test_name ... ok
[INFO] [stdout] test validators::single::name::tests::test_validate ... ok
[INFO] [stdout] test validators::single::plus_line::tests::test_code ... ok
[INFO] [stdout] test validators::single::plus_line::tests::test_level ... ok
[INFO] [stdout] test validators::single::plus_line::tests::test_validate ... ok
[INFO] [stdout] test validators::single::plus_line::tests::test_name ... ok
[INFO] [stdout] test validators::single::quality_string::tests::test_code ... ok
[INFO] [stdout] test validators::single::quality_string::tests::test_level ... ok
[INFO] [stdout] test validators::single::quality_string::tests::test_name ... ok
[INFO] [stdout] test validators::single::quality_string::tests::test_validate ... ok
[INFO] [stdout] test validators::tests::test_filter_paired_read_validators ... ok
[INFO] [stdout] test validators::tests::test_filter_paired_read_validators_with_disabled_validators ... ok
[INFO] [stdout] test validators::tests::test_filter_single_read_validators ... ok
[INFO] [stdout] test validators::tests::test_filter_validators ... ok
[INFO] [stdout] test validators::tests::test_filter_single_read_validators_with_disabled_validators ... ok
[INFO] [stdout] test validators::validation_level::tests::test_from_str ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 52 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/fq-51970dfb80c46ca9)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests fqlib
[INFO] [stdout] 
[INFO] [stdout] running 9 tests
[INFO] [stdout] test src/generator.rs - generator::Generator<R>::from_rng (line 83) ... ok
[INFO] [stdout] test src/fastq/record.rs - fastq::record::Record::reset (line 74) ... ok
[INFO] [stdout] test src/generator.rs - generator::Generator<R>::next_record_with_name (line 142) ... ok
[INFO] [stdout] test src/generator.rs - generator::Generator<R>::next_record (line 123) ... ok
[INFO] [stdout] test src/distributions/character.rs - distributions::character::Character (line 10) ... ok
[INFO] [stdout] test src/validators/single/duplicate_name.rs - validators::single::duplicate_name::DuplicateNameValidator::insert (line 63) ... ok
[INFO] [stdout] test src/validators/single/duplicate_name.rs - validators::single::duplicate_name::DuplicateNameValidator (line 22) ... ok
[INFO] [stdout] test src/validators/single/duplicate_name.rs - validators::single::duplicate_name::DuplicateNameValidator::is_empty (line 86) ... ok
[INFO] [stdout] test src/generator.rs - generator::Generator<SmallRng>::new (line 55) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 9 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 2.47s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "3fa8284b00427f53dc1610672f4d38f0dec116c9c682413696d8ee25c76c59b5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3fa8284b00427f53dc1610672f4d38f0dec116c9c682413696d8ee25c76c59b5", kill_on_drop: false }`
[INFO] [stdout] 3fa8284b00427f53dc1610672f4d38f0dec116c9c682413696d8ee25c76c59b5