[INFO] cloning repository https://github.com/ryanobeirne/cgats [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/ryanobeirne/cgats" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fryanobeirne%2Fcgats", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fryanobeirne%2Fcgats'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 1aa6c30c8df9efb17841013de5793c89124d2ce8 [INFO] testing ryanobeirne/cgats against beta-2021-09-08 for beta-1.56-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fryanobeirne%2Fcgats" "/workspace/builds/worker-0/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/ryanobeirne/cgats on toolchain beta-2021-09-08 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-09-08" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/ryanobeirne/cgats [INFO] removed 0 missing examples [INFO] finished tweaking git repo https://github.com/ryanobeirne/cgats [INFO] tweaked toml for git repo https://github.com/ryanobeirne/cgats written to /workspace/builds/worker-0/source/Cargo.toml [INFO] crate git repo https://github.com/ryanobeirne/cgats already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-09-08" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 8d6a405c62516387fe8f1094d4ae5c0f63d1ea3af98b0ba6c5f19efa491a4d3d [INFO] running `Command { std: "docker" "start" "-a" "8d6a405c62516387fe8f1094d4ae5c0f63d1ea3af98b0ba6c5f19efa491a4d3d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "8d6a405c62516387fe8f1094d4ae5c0f63d1ea3af98b0ba6c5f19efa491a4d3d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8d6a405c62516387fe8f1094d4ae5c0f63d1ea3af98b0ba6c5f19efa491a4d3d", kill_on_drop: false }` [INFO] [stdout] 8d6a405c62516387fe8f1094d4ae5c0f63d1ea3af98b0ba6c5f19efa491a4d3d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 1f343b48a6e6e23f9c3c80b16b8733999fca30ce0375bcbfcd9c6649b54a776b [INFO] running `Command { std: "docker" "start" "-a" "1f343b48a6e6e23f9c3c80b16b8733999fca30ce0375bcbfcd9c6649b54a776b", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.53 [INFO] [stderr] Compiling num-traits v0.2.6 [INFO] [stderr] Compiling num-integer v0.1.39 [INFO] [stderr] Compiling num-bigint v0.2.2 [INFO] [stderr] Compiling num-complex v0.2.1 [INFO] [stderr] Compiling num-iter v0.1.37 [INFO] [stderr] Compiling num-rational v0.2.1 [INFO] [stderr] Compiling bitflags v1.0.4 [INFO] [stderr] Compiling rustc_tools_util v0.2.0 [INFO] [stderr] Compiling deltae v0.1.5 [INFO] [stderr] Compiling rand_jitter v0.1.3 [INFO] [stderr] Compiling rand_pcg v0.1.2 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling atty v0.2.11 [INFO] [stderr] Compiling rand_os v0.1.3 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Compiling num v0.2.0 [INFO] [stderr] Compiling statistical v1.0.0 [INFO] [stderr] Compiling cgats v0.1.8-alpha.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: `#[macro_use]` only has an effect on `extern crate` and modules [INFO] [stdout] --> src/error.rs:7:1 [INFO] [stdout] | [INFO] [stdout] 7 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_attributes)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/error.rs:36:56 [INFO] [stdout] | [INFO] [stdout] 36 | write!(f, "CgatsError::{:?}: {}", &self, &self.description()) [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 7.47s [INFO] running `Command { std: "docker" "inspect" "1f343b48a6e6e23f9c3c80b16b8733999fca30ce0375bcbfcd9c6649b54a776b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1f343b48a6e6e23f9c3c80b16b8733999fca30ce0375bcbfcd9c6649b54a776b", kill_on_drop: false }` [INFO] [stdout] 1f343b48a6e6e23f9c3c80b16b8733999fca30ce0375bcbfcd9c6649b54a776b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d4412510bab60ff8721dcfff2e9383fadb955125458c72a6f0eeb5b8d3c43e0f [INFO] running `Command { std: "docker" "start" "-a" "d4412510bab60ff8721dcfff2e9383fadb955125458c72a6f0eeb5b8d3c43e0f", kill_on_drop: false }` [INFO] [stderr] Compiling rand v0.4.6 [INFO] [stdout] warning: `#[macro_use]` only has an effect on `extern crate` and modules [INFO] [stdout] --> src/error.rs:7:1 [INFO] [stdout] | [INFO] [stdout] 7 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_attributes)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/error.rs:36:56 [INFO] [stdout] | [INFO] [stdout] 36 | write!(f, "CgatsError::{:?}: {}", &self, &self.description()) [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling rand v0.3.23 [INFO] [stderr] Compiling uuid v0.1.18 [INFO] [stderr] Compiling mktemp v0.3.1 [INFO] [stderr] Compiling cgats v0.1.8-alpha.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: `#[macro_use]` only has an effect on `extern crate` and modules [INFO] [stdout] --> src/error.rs:7:1 [INFO] [stdout] | [INFO] [stdout] 7 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_attributes)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/error.rs:36:56 [INFO] [stdout] | [INFO] [stdout] 36 | write!(f, "CgatsError::{:?}: {}", &self, &self.description()) [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 4.05s [INFO] running `Command { std: "docker" "inspect" "d4412510bab60ff8721dcfff2e9383fadb955125458c72a6f0eeb5b8d3c43e0f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d4412510bab60ff8721dcfff2e9383fadb955125458c72a6f0eeb5b8d3c43e0f", kill_on_drop: false }` [INFO] [stdout] d4412510bab60ff8721dcfff2e9383fadb955125458c72a6f0eeb5b8d3c43e0f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] cf085d0748925ecde0247beecf667319d52485a2535b6739404f26081c5714aa [INFO] running `Command { std: "docker" "start" "-a" "cf085d0748925ecde0247beecf667319d52485a2535b6739404f26081c5714aa", kill_on_drop: false }` [INFO] [stderr] warning: `#[macro_use]` only has an effect on `extern crate` and modules [INFO] [stderr] --> src/error.rs:7:1 [INFO] [stderr] | [INFO] [stderr] 7 | #[macro_use] [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_attributes)]` on by default [INFO] [stderr] [INFO] [stderr] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stderr] --> src/error.rs:36:56 [INFO] [stderr] | [INFO] [stderr] 36 | write!(f, "CgatsError::{:?}: {}", &self, &self.description()) [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(deprecated)]` on by default [INFO] [stderr] [INFO] [stderr] warning: `cgats` (lib) generated 2 warnings [INFO] [stderr] warning: `cgats` (lib test) generated 2 warnings (2 duplicates) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.12s [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/cgats-00cd42c434d9c5f9) [INFO] [stdout] running 15 tests [INFO] [stdout] test compare::average_cgats ... ok [INFO] [stdout] test vendor::from_str ... ok [INFO] [stdout] test cgats::write_data_map ... ok [INFO] [stdout] test data_vec::from_file ... ok [INFO] [stdout] test compare::cat_cgats ... ok [INFO] [stdout] test test::bad_files ... ok [INFO] [stdout] test cgats::write_fields ... ok [INFO] [stdout] test cgats::cgats_display ... ok [INFO] [stdout] test cgats::write_meta ... ok [INFO] [stdout] test compare::reindex ... ok [INFO] [stdout] test compare::deltae ... ok [INFO] [stdout] test de_report::de_report ... ok [INFO] [stdout] test compare::average_cb ... ok [INFO] [stdout] test test::good_files ... ok [INFO] [stdout] test test::reconstruct ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 15 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 1.26s [INFO] [stdout] [INFO] [stderr] Doc-tests cgats [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "cf085d0748925ecde0247beecf667319d52485a2535b6739404f26081c5714aa", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cf085d0748925ecde0247beecf667319d52485a2535b6739404f26081c5714aa", kill_on_drop: false }` [INFO] [stdout] cf085d0748925ecde0247beecf667319d52485a2535b6739404f26081c5714aa