[INFO] cloning repository https://github.com/guertinlab/fqdedup [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/guertinlab/fqdedup" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Ffqdedup", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Ffqdedup'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] ea20cbff76a2b3eb2d838900c46fc0bafd8fe1ba [INFO] testing guertinlab/fqdedup against beta-2021-09-08 for beta-1.56-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Ffqdedup" "/workspace/builds/worker-4/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/guertinlab/fqdedup on toolchain beta-2021-09-08 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-09-08" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/guertinlab/fqdedup [INFO] finished tweaking git repo https://github.com/guertinlab/fqdedup [INFO] tweaked toml for git repo https://github.com/guertinlab/fqdedup written to /workspace/builds/worker-4/source/Cargo.toml [INFO] crate git repo https://github.com/guertinlab/fqdedup already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-09-08" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded serde v1.0.25 [INFO] [stderr] Downloaded regex v0.2.3 [INFO] [stderr] Downloaded libc v0.2.34 [INFO] [stderr] Downloaded serde_derive_internals v0.18.1 [INFO] [stderr] Downloaded serde_derive v1.0.25 [INFO] [stderr] Downloaded patricia_tree v0.1.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] e6ea8436c32c5d68bbbd51fcd495bb6983e2eff5b4898fb8c07806a731d46da7 [INFO] running `Command { std: "docker" "start" "-a" "e6ea8436c32c5d68bbbd51fcd495bb6983e2eff5b4898fb8c07806a731d46da7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "e6ea8436c32c5d68bbbd51fcd495bb6983e2eff5b4898fb8c07806a731d46da7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e6ea8436c32c5d68bbbd51fcd495bb6983e2eff5b4898fb8c07806a731d46da7", kill_on_drop: false }` [INFO] [stdout] e6ea8436c32c5d68bbbd51fcd495bb6983e2eff5b4898fb8c07806a731d46da7 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5c076c2f33ef9c3a21a4b387b9e12fea625d6e863897e9855db60fc2bff58813 [INFO] running `Command { std: "docker" "start" "-a" "5c076c2f33ef9c3a21a4b387b9e12fea625d6e863897e9855db60fc2bff58813", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.34 [INFO] [stderr] Compiling serde v1.0.25 [INFO] [stderr] Compiling thread_local v0.3.5 [INFO] [stderr] Compiling serde_derive_internals v0.18.1 [INFO] [stderr] Compiling memchr v2.0.1 [INFO] [stderr] Compiling patricia_tree v0.1.1 [INFO] [stderr] Compiling aho-corasick v0.6.4 [INFO] [stderr] Compiling serde_derive v1.0.25 [INFO] [stderr] Compiling regex v0.2.3 [INFO] [stderr] Compiling docopt v0.8.1 [INFO] [stderr] Compiling fqdedup v1.0.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/main.rs:39:45 [INFO] [stdout] | [INFO] [stdout] 39 | panic!(format!("Error: {}", err.description())); [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:136:21 [INFO] [stdout] | [INFO] [stdout] 136 | let mut output = File::create(output_filename(&args.arg_filename, args.flag_output)).unwrap(); [INFO] [stdout] | ----^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:148:17 [INFO] [stdout] | [INFO] [stdout] 148 | let mut output = File::create(output_filename(&args.arg_filename, args.flag_output)).unwrap(); [INFO] [stdout] | ----^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/main.rs:39:20 [INFO] [stdout] | [INFO] [stdout] 39 | panic!(format!("Error: {}", err.description())); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 39 - panic!(format!("Error: {}", err.description())); [INFO] [stdout] 39 + panic!("Error: {}", err.description()); [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/main.rs:53:21 [INFO] [stdout] | [INFO] [stdout] 53 | _ => panic!(format!("Unknown base: {}", base as char)) [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 53 - _ => panic!(format!("Unknown base: {}", base as char)) [INFO] [stdout] 53 + _ => panic!("Unknown base: {}", base as char) [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 11.58s [INFO] running `Command { std: "docker" "inspect" "5c076c2f33ef9c3a21a4b387b9e12fea625d6e863897e9855db60fc2bff58813", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5c076c2f33ef9c3a21a4b387b9e12fea625d6e863897e9855db60fc2bff58813", kill_on_drop: false }` [INFO] [stdout] 5c076c2f33ef9c3a21a4b387b9e12fea625d6e863897e9855db60fc2bff58813 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e8249edda350a162e82cd323ed3a0a9b6708498f7942649c121fc29be893b528 [INFO] running `Command { std: "docker" "start" "-a" "e8249edda350a162e82cd323ed3a0a9b6708498f7942649c121fc29be893b528", kill_on_drop: false }` [INFO] [stderr] Compiling fqdedup v1.0.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stdout] --> src/main.rs:39:45 [INFO] [stdout] | [INFO] [stdout] 39 | panic!(format!("Error: {}", err.description())); [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:136:21 [INFO] [stdout] | [INFO] [stdout] 136 | let mut output = File::create(output_filename(&args.arg_filename, args.flag_output)).unwrap(); [INFO] [stdout] | ----^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:148:17 [INFO] [stdout] | [INFO] [stdout] 148 | let mut output = File::create(output_filename(&args.arg_filename, args.flag_output)).unwrap(); [INFO] [stdout] | ----^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/main.rs:39:20 [INFO] [stdout] | [INFO] [stdout] 39 | panic!(format!("Error: {}", err.description())); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 39 - panic!(format!("Error: {}", err.description())); [INFO] [stdout] 39 + panic!("Error: {}", err.description()); [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/main.rs:53:21 [INFO] [stdout] | [INFO] [stdout] 53 | _ => panic!(format!("Unknown base: {}", base as char)) [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 53 - _ => panic!(format!("Unknown base: {}", base as char)) [INFO] [stdout] 53 + _ => panic!("Unknown base: {}", base as char) [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.45s [INFO] running `Command { std: "docker" "inspect" "e8249edda350a162e82cd323ed3a0a9b6708498f7942649c121fc29be893b528", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e8249edda350a162e82cd323ed3a0a9b6708498f7942649c121fc29be893b528", kill_on_drop: false }` [INFO] [stdout] e8249edda350a162e82cd323ed3a0a9b6708498f7942649c121fc29be893b528 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 294c687dcf83b1fae072ecb01e04ce45573598f198aa7df6856a40981c77fa29 [INFO] running `Command { std: "docker" "start" "-a" "294c687dcf83b1fae072ecb01e04ce45573598f198aa7df6856a40981c77fa29", kill_on_drop: false }` [INFO] [stderr] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string() [INFO] [stderr] --> src/main.rs:39:45 [INFO] [stderr] | [INFO] [stderr] 39 | panic!(format!("Error: {}", err.description())); [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(deprecated)]` on by default [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/main.rs:136:21 [INFO] [stderr] | [INFO] [stderr] 136 | let mut output = File::create(output_filename(&args.arg_filename, args.flag_output)).unwrap(); [INFO] [stderr] | ----^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` on by default [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/main.rs:148:17 [INFO] [stderr] | [INFO] [stderr] 148 | let mut output = File::create(output_filename(&args.arg_filename, args.flag_output)).unwrap(); [INFO] [stderr] | ----^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] [INFO] [stderr] warning: panic message is not a string literal [INFO] [stderr] --> src/main.rs:39:20 [INFO] [stderr] | [INFO] [stderr] 39 | panic!(format!("Error: {}", err.description())); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stderr] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stderr] = note: for more information, see [INFO] [stderr] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stderr] help: remove the `format!(..)` macro call [INFO] [stderr] | [INFO] [stderr] 39 - panic!(format!("Error: {}", err.description())); [INFO] [stderr] 39 + panic!("Error: {}", err.description()); [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: panic message is not a string literal [INFO] [stderr] --> src/main.rs:53:21 [INFO] [stderr] | [INFO] [stderr] 53 | _ => panic!(format!("Unknown base: {}", base as char)) [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stderr] = note: for more information, see [INFO] [stderr] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stderr] help: remove the `format!(..)` macro call [INFO] [stderr] | [INFO] [stderr] 53 - _ => panic!(format!("Unknown base: {}", base as char)) [INFO] [stderr] 53 + _ => panic!("Unknown base: {}", base as char) [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: `fqdedup` (bin "fqdedup" test) generated 5 warnings [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.01s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/fqdedup-bbde6efc1cd413f8) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "294c687dcf83b1fae072ecb01e04ce45573598f198aa7df6856a40981c77fa29", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "294c687dcf83b1fae072ecb01e04ce45573598f198aa7df6856a40981c77fa29", kill_on_drop: false }` [INFO] [stdout] 294c687dcf83b1fae072ecb01e04ce45573598f198aa7df6856a40981c77fa29