[INFO] cloning repository https://github.com/MarcoMernberger/mbf_bam [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/MarcoMernberger/mbf_bam" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMarcoMernberger%2Fmbf_bam", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMarcoMernberger%2Fmbf_bam'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 34e16cfeccb834cd3fa04ebf52845b699f518678 [INFO] testing MarcoMernberger/mbf_bam against beta-2021-09-08 for beta-1.56-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMarcoMernberger%2Fmbf_bam" "/workspace/builds/worker-0/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/MarcoMernberger/mbf_bam on toolchain beta-2021-09-08 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-09-08" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/MarcoMernberger/mbf_bam [INFO] finished tweaking git repo https://github.com/MarcoMernberger/mbf_bam [INFO] tweaked toml for git repo https://github.com/MarcoMernberger/mbf_bam written to /workspace/builds/worker-0/source/Cargo.toml [INFO] crate git repo https://github.com/MarcoMernberger/mbf_bam already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-09-08" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded clang-sys v0.28.0 [INFO] [stderr] Downloaded feature-probe v0.1.1 [INFO] [stderr] Downloaded bv v0.10.0 [INFO] [stderr] Downloaded mashup v0.1.9 [INFO] [stderr] Downloaded mashup-impl v0.1.9 [INFO] [stderr] Downloaded lzma-sys v0.1.14 [INFO] [stderr] Downloaded pyo3-derive-backend v0.6.0 [INFO] [stderr] Downloaded pyo3 v0.6.0 [INFO] [stderr] Downloaded bio v0.25.0 [INFO] [stderr] Downloaded csv v1.0.6 [INFO] [stderr] Downloaded ctor v0.1.8 [INFO] [stderr] Downloaded pyo3cls v0.6.0 [INFO] [stderr] Downloaded bio-types v0.5.1 [INFO] [stderr] Downloaded rust-htslib v0.24.0 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded fs-utils v1.1.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] c440b6c1097f66795ccdd0f5df6ae5d0229a42fee03b20888c8661c25af2dc3b [INFO] running `Command { std: "docker" "start" "-a" "c440b6c1097f66795ccdd0f5df6ae5d0229a42fee03b20888c8661c25af2dc3b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c440b6c1097f66795ccdd0f5df6ae5d0229a42fee03b20888c8661c25af2dc3b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c440b6c1097f66795ccdd0f5df6ae5d0229a42fee03b20888c8661c25af2dc3b", kill_on_drop: false }` [INFO] [stdout] c440b6c1097f66795ccdd0f5df6ae5d0229a42fee03b20888c8661c25af2dc3b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ed6fad8b0bdd110f4a16ca4135deccbb29109c5e5d49efb96dbe525007556ec5 [INFO] running `Command { std: "docker" "start" "-a" "ed6fad8b0bdd110f4a16ca4135deccbb29109c5e5d49efb96dbe525007556ec5", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v0.4.27 [INFO] [stderr] Compiling syn v0.15.30 [INFO] [stderr] Compiling cc v1.0.35 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling cfg-if v0.1.7 [INFO] [stderr] Compiling serde v1.0.90 [INFO] [stderr] Compiling byteorder v1.3.1 [INFO] [stderr] Compiling proc-macro2 v1.0.6 [INFO] [stderr] Compiling bindgen v0.51.1 [INFO] [stderr] Compiling proc-macro-hack-impl v0.4.1 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling autocfg v0.1.2 [INFO] [stderr] Compiling smallvec v0.6.9 [INFO] [stderr] Compiling failure_derive v0.1.5 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling bio v0.25.0 [INFO] [stderr] Compiling bit-vec v0.5.1 [INFO] [stderr] Compiling rayon v1.0.3 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling rustc-demangle v0.1.13 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling clang-sys v0.28.0 [INFO] [stderr] Compiling fs-utils v1.1.0 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling itertools v0.8.0 [INFO] [stderr] Compiling num-integer v0.1.39 [INFO] [stderr] Compiling miniz_oxide v0.3.5 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling atty v0.2.11 [INFO] [stderr] Compiling which v3.1.0 [INFO] [stderr] Compiling num_cpus v1.10.0 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling ordered-float v1.0.2 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling log v0.4.6 [INFO] [stderr] Compiling crossbeam-utils v0.2.2 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling statrs v0.9.0 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Compiling bit-set v0.5.1 [INFO] [stderr] Compiling unicode-normalization v0.1.8 [INFO] [stderr] Compiling crossbeam-epoch v0.3.1 [INFO] [stderr] Compiling backtrace v0.3.15 [INFO] [stderr] Compiling flate2 v1.0.13 [INFO] [stderr] Compiling proc-macro-hack v0.4.1 [INFO] [stderr] Compiling crossbeam-deque v0.2.0 [INFO] [stderr] Compiling rustc-hash v1.0.1 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Compiling quote v0.6.12 [INFO] [stderr] Compiling libloading v0.5.0 [INFO] [stderr] Compiling bzip2-sys v0.1.7 [INFO] [stderr] Compiling backtrace-sys v0.1.28 [INFO] [stderr] Compiling lzma-sys v0.1.14 [INFO] [stderr] Compiling libz-sys v1.0.25 [INFO] [stderr] Compiling rayon-core v1.4.1 [INFO] [stderr] Compiling aho-corasick v0.7.6 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Compiling csv-core v0.1.5 [INFO] [stderr] Compiling idna v0.1.5 [INFO] [stderr] Compiling mashup-impl v0.1.9 [INFO] [stderr] Compiling cexpr v0.3.5 [INFO] [stderr] Compiling url v1.7.2 [INFO] [stderr] Compiling mashup v0.1.9 [INFO] [stderr] Compiling regex v1.3.1 [INFO] [stderr] Compiling env_logger v0.6.1 [INFO] [stderr] Compiling pyo3 v0.6.0 [INFO] [stderr] Compiling synstructure v0.10.1 [INFO] [stderr] Compiling pyo3-derive-backend v0.6.0 [INFO] [stderr] error: failed to run custom build command for `pyo3 v0.6.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/pyo3-8fbdba465092ff01/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] Error: pyo3 requires a nightly or dev version of Rust. [INFO] [stderr] Installed version is: 1.56.0-beta.1 (2021-09-07). Minimum required: 1.34.0-nightly (2019-02-06). [INFO] [stderr] thread 'main' panicked at 'Aborting compilation due to incompatible compiler.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pyo3-0.6.0/build.rs:540:17 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x5632c7af850c - std::backtrace_rs::backtrace::libunwind::trace::h51faa62df48810e4 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x5632c7af850c - std::backtrace_rs::backtrace::trace_unsynchronized::h91de4d8e16d607e4 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x5632c7af850c - std::sys_common::backtrace::_print_fmt::h71b0935f97e4322c [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x5632c7af850c - ::fmt::h9a78218788c14e18 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x5632c7b16f0c - core::fmt::write::h3381b3176fe2b3d3 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/fmt/mod.rs:1150:17 [INFO] [stderr] 5: 0x5632c7af57e5 - std::io::Write::write_fmt::h1d5220480c7a2437 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/io/mod.rs:1667:15 [INFO] [stderr] 6: 0x5632c7af9e30 - std::sys_common::backtrace::_print::h4b77abc4d907ed0e [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x5632c7af9e30 - std::sys_common::backtrace::print::hb170c60b542377ad [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x5632c7af9e30 - std::panicking::default_hook::{{closure}}::h12bbda9af8901ee3 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:210:50 [INFO] [stderr] 9: 0x5632c7af99e7 - std::panicking::default_hook::h8c6c66d3f3ba6768 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:227:9 [INFO] [stderr] 10: 0x5632c7afa4e4 - std::panicking::rust_panic_with_hook::h36f2fa0bb09f4069 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:624:17 [INFO] [stderr] 11: 0x5632c7a3c172 - std::panicking::begin_panic::{{closure}}::h4e6a948928330aee [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:544:9 [INFO] [stderr] 12: 0x5632c7a27ef9 - std::sys_common::backtrace::__rust_end_short_backtrace::hc9d8b2fac60a7936 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x5632c7a3c0b3 - std::panicking::begin_panic::h54fa9579b3495def [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:543:12 [INFO] [stderr] 14: 0x5632c7905f88 - build_script_build::check_rustc_version::h4d9c516739ef3bec [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pyo3-0.6.0/build.rs:540:17 [INFO] [stderr] 15: 0x5632c79064a4 - build_script_build::main::h067fc0968bc95be4 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pyo3-0.6.0/build.rs:564:5 [INFO] [stderr] 16: 0x5632c79179e2 - core::ops::function::FnOnce::call_once::he29b04829ca0926c [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x5632c790e2ca - std::sys_common::backtrace::__rust_begin_short_backtrace::h43b5426b59f2e33a [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x5632c790ea16 - std::rt::lang_start::{{closure}}::h0b36e2d12335eaad [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/rt.rs:63:18 [INFO] [stderr] 19: 0x5632c7afa9ea - core::ops::function::impls:: for &F>::call_once::hc590b210ed55e22f [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x5632c7afa9ea - std::panicking::try::do_call::h5f0600b7a33ea1af [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:403:40 [INFO] [stderr] 21: 0x5632c7afa9ea - std::panicking::try::he15826df0f376a33 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:367:19 [INFO] [stderr] 22: 0x5632c7afa9ea - std::panic::catch_unwind::hd8af3a578b6b4c86 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panic.rs:129:14 [INFO] [stderr] 23: 0x5632c7afa9ea - std::rt::lang_start_internal::{{closure}}::h301d1329324ae1f0 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/rt.rs:45:48 [INFO] [stderr] 24: 0x5632c7afa9ea - std::panicking::try::do_call::h941e8fdb0bd03655 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:403:40 [INFO] [stderr] 25: 0x5632c7afa9ea - std::panicking::try::ha20a77bf65530f63 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:367:19 [INFO] [stderr] 26: 0x5632c7afa9ea - std::panic::catch_unwind::h33afc061cc69ef90 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panic.rs:129:14 [INFO] [stderr] 27: 0x5632c7afa9ea - std::rt::lang_start_internal::hc05c244593147106 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/rt.rs:45:20 [INFO] [stderr] 28: 0x5632c790e9e0 - std::rt::lang_start::hb43801d11d6c2503 [INFO] [stderr] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/rt.rs:62:5 [INFO] [stderr] 29: 0x5632c790791c - main [INFO] [stderr] 30: 0x7f050d05e0b3 - __libc_start_main [INFO] [stderr] 31: 0x5632c78feede - _start [INFO] [stderr] 32: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "ed6fad8b0bdd110f4a16ca4135deccbb29109c5e5d49efb96dbe525007556ec5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ed6fad8b0bdd110f4a16ca4135deccbb29109c5e5d49efb96dbe525007556ec5", kill_on_drop: false }` [INFO] [stdout] ed6fad8b0bdd110f4a16ca4135deccbb29109c5e5d49efb96dbe525007556ec5